Factsheet for TraesCS7A01G086600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G385700.1	Wheat	cytosol	43.75	89.5
HORVU7Hr1G019500.1	Barley	mitochondrion	91.96	79.23
Zm00001d000216_P001	Maize	golgi, vacuole	75.22	76.94
Os06t0144200-01	Rice	extracellular, plasma membrane	75.45	75.11
OQU75805	Sorghum	mitochondrion	73.21	74.21
GSMUA_Achr10P...	Banana	cytosol	46.21	59.83
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	58.26	59.73
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	57.59	58.9
GSMUA_Achr10P...	Banana	extracellular	50.22	57.69
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	56.92	57.56
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	56.25	57.4
VIT_17s0000g05740.t01	Wine grape	extracellular	54.91	57.34
PGSC0003DMT400046723	Potato	endoplasmic reticulum, golgi, vacuole	55.36	57.01
Solyc03g113150.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	54.91	56.55
Solyc06g071020.2.1	Tomato	extracellular	54.69	56.32
PGSC0003DMT400083135	Potato	extracellular	54.69	56.32
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	54.91	55.41
KRH63402	Soybean	extracellular	53.79	55.4
KRH45851	Soybean	extracellular	55.13	54.77
Solyc01g010740.2.1	Tomato	endoplasmic reticulum, extracellular	53.35	54.44
PGSC0003DMT400002241	Potato	extracellular	53.35	54.44
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	53.79	54.4
KRH54508	Soybean	extracellular	40.4	54.35
KRH74782	Soybean	extracellular	53.57	53.57
PGSC0003DMT400003310	Potato	extracellular	53.12	53.36
PGSC0003DMT400014086	Potato	extracellular	53.12	53.24
Solyc02g087670.2.1	Tomato	extracellular	52.9	53.14
KRH69345	Soybean	extracellular	52.9	53.02
CDY68729	Canola	endoplasmic reticulum, extracellular, plasma membrane	54.02	52.84
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.79	52.62
CDX96854	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.79	52.62
Solyc03g058890.2.1	Tomato	extracellular	52.68	52.56
KRH01130	Soybean	extracellular	51.56	52.5
Bra026221.1-P	Field mustard	endoplasmic reticulum	53.57	52.4
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	51.79	52.37
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	46.21	52.14
PGSC0003DMT400014085	Potato	extracellular, golgi	46.21	52.01
CDY39314	Canola	extracellular	53.12	51.85
CDY04133	Canola	extracellular	53.12	51.85
Bra017412.1-P	Field mustard	extracellular	53.12	51.85
CDX70590	Canola	endoplasmic reticulum, extracellular	54.91	51.79
Bra026832.1-P	Field mustard	extracellular	52.23	51.77
Solyc03g058910.2.1	Tomato	extracellular, golgi	45.98	51.76
KRG93502	Soybean	extracellular	51.12	51.69
CDY17432	Canola	extracellular	52.68	51.42
AT1G14420.1	Thale cress	endoplasmic reticulum	52.46	51.2
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	54.24	51.16
CDX78607	Canola	endoplasmic reticulum, extracellular	54.24	51.16
PGSC0003DMT400017863	Potato	extracellular	50.0	50.68
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	53.12	50.42
CDX85564	Canola	extracellular	52.9	50.11
CDY63769	Canola	extracellular	53.57	50.1
CDX91953	Canola	endoplasmic reticulum, extracellular	52.46	49.89
CDX74293	Canola	endoplasmic reticulum, extracellular	52.46	49.89
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	51.34	49.68
Solyc05g007080.2.1	Tomato	extracellular	50.45	49.56
Bra023504.1-P	Field mustard	extracellular	53.12	49.48
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	52.01	49.47
CDY45202	Canola	extracellular	50.67	49.46
CDY66593	Canola	endoplasmic reticulum, extracellular	54.91	49.3
CDY28691	Canola	endoplasmic reticulum, extracellular, vacuole	51.56	49.25
Bra024811.1-P	Field mustard	extracellular	50.45	49.24
CDX69550	Canola	endoplasmic reticulum, extracellular	54.69	49.1
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	54.69	49.1
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.0	49.02
TraesCS6A01G139800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.29	48.94
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	51.79	48.84
PGSC0003DMT400045436	Potato	extracellular	50.0	48.8
CDY03043	Canola	extracellular	49.78	48.58
AT2G02720.1	Thale cress	extracellular, vacuole	49.33	48.57
CDX81636	Canola	endoplasmic reticulum	51.12	47.31
CDY53552	Canola	extracellular	52.01	47.07
TraesCS2A01G016500.1	Wheat	golgi	50.0	46.57
TraesCS1A01G143600.1	Wheat	extracellular	48.66	45.42
GSMUA_Achr7P08840_001	Banana	nucleus	55.58	37.16
Solyc02g067450.2.1	Tomato	extracellular	49.55	36.04
CDY04136	Canola	mitochondrion, nucleus	0.45	1.32

Protein Annotations

EnsemblPlants:TraesCS7A01G086600.1	EnsemblPlantsGene:TraesCS7A01G086600	Gene3D:2.160.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0030570
InterPro:AmbAllergen	InterPro:IPR012334	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
KEGG:00040+4.2.2.2	PANTHER:PTHR31683	PANTHER:PTHR31683:SF60	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
SEG:seg	SignalP:SignalP-noTM	SMART:SM00656	SUPFAM:SSF51126	MapMan:21.3.5.2	:

Description

No Description!

Coordinates

chr7A:+:50615177..50616523

Molecular Weight (calculated)

49728.0 Da

IEP (calculated)

9.621

GRAVY (calculated)

-0.368

Length

448 amino acids

Sequence
(BLAST)

001: MAAGSLMARS PLHILLYVLA TLAVTAAAEA PTQKAPLPAY NVTADEEYWA KRAEEARAYS RAAYVSDPVA ELNRFNRDVH RATARRSLAR RYGGRPCVAT
101: NPIDRCWRCR ADWASNRQRL ATCARGFGHN AAGGAGGRTY VVTDLSDDEL IVPKKGTLRF GVIQDRPLWI VFGRSMVIRL SQELIVNSNK TIDGRGAQVH
201: ITGAQMTLQG VRHVIIHNVH IHHSVPHSGG MIRDSKHHYG RRTRSDGDGV SILSSSSVWI DHVSMSSCAD GLIDVVSGST AITVSNSHFT KHDHVMLFGA
301: SNTEEQDRMM QVTVAFNHFG KGLVQRMPRC RFGFFQVVNN DYTHWQMYAI GGNRDPTIIS QGNRFIAPDD GNAKEVTKRE YAPYTEYKDW VWKSQGDVMV
401: NGAFFNESGG QNERRYGNMD FIPAKHGRYV GQLTRFAGVL DCGIGKPC

Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)

001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC

Arabidopsis Description

AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.