Factsheet for Bra008721.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69550	Canola	endoplasmic reticulum, extracellular	100.0	100.0
CDY66593	Canola	endoplasmic reticulum, extracellular	98.4	98.4
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	84.37	89.19
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	83.77	88.0
Bra023504.1-P	Field mustard	extracellular	81.36	84.41
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	72.34	76.65
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	54.71	62.19
TraesCS4A01G385700.1	Wheat	cytosol	27.05	61.64
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	54.51	61.4
GSMUA_Achr10P...	Banana	cytosol	42.08	60.69
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	52.51	59.95
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	52.71	59.37
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	51.5	58.68
PGSC0003DMT400003310	Potato	extracellular	51.7	57.85
Solyc02g087670.2.1	Tomato	extracellular	51.5	57.62
GSMUA_Achr10P...	Banana	extracellular	44.89	57.44
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	50.7	57.11
PGSC0003DMT400017863	Potato	extracellular	50.5	57.01
PGSC0003DMT400014086	Potato	extracellular	50.7	56.6
Solyc03g058890.2.1	Tomato	extracellular	50.9	56.57
KRG93502	Soybean	extracellular	50.1	56.43
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	43.89	55.16
HORVU6Hr1G038630.1	Barley	extracellular	44.69	55.06
OQU75805	Sorghum	mitochondrion	48.7	54.98
Os06t0144200-01	Rice	extracellular, plasma membrane	49.5	54.89
KRH01130	Soybean	extracellular	48.3	54.77
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	49.1	54.69
Zm00001d000216_P001	Maize	golgi, vacuole	47.9	54.57
Bra020672.1-P	Field mustard	extracellular	45.49	54.44
Bra036155.1-P	Field mustard	extracellular	45.49	54.31
Os02t0214400-01	Rice	plasma membrane	48.5	54.26
Bra026832.1-P	Field mustard	extracellular	49.1	54.2
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	49.3	54.19
EES06507	Sorghum	golgi, vacuole	48.3	54.16
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	49.3	53.83
Bra017412.1-P	Field mustard	extracellular	49.5	53.81
Bra032696.1-P	Field mustard	endoplasmic reticulum, extracellular	44.49	53.75
Bra013833.1-P	Field mustard	endoplasmic reticulum, vacuole	43.69	53.69
Bra033980.1-P	Field mustard	extracellular	43.49	53.45
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	45.29	53.43
Bra004073.1-P	Field mustard	extracellular	43.49	53.32
Bra038614.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.09	53.27
Os06t0583900-01	Rice	plasma membrane	47.7	53.12
Bra026221.1-P	Field mustard	endoplasmic reticulum	48.7	53.06
Bra035852.1-P	Field mustard	extracellular	43.49	52.93
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.89	52.84
Bra024811.1-P	Field mustard	extracellular	48.5	52.72
Bra010482.1-P	Field mustard	endoplasmic reticulum, extracellular	42.89	52.71
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	45.69	52.66
TraesCS6D01G170500.1	Wheat	golgi	44.69	52.47
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	44.69	52.47
Bra004254.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.69	52.46
Bra039081.1-P	Field mustard	extracellular, plastid	43.29	52.43
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	48.1	52.4
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.7	52.26
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	46.49	52.25
Os06t0144900-01	Rice	mitochondrion	49.5	52.22
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	47.29	52.1
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	44.89	51.97
Bra025274.1-P	Field mustard	extracellular	42.89	51.94
TraesCS7D01G356700.1	Wheat	extracellular	46.09	51.8
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.09	51.8
Solyc03g058910.2.1	Tomato	extracellular, golgi	41.08	51.51
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.69	51.35
PGSC0003DMT400014085	Potato	extracellular, golgi	40.88	51.26
Bra015341.1-P	Field mustard	extracellular	44.09	51.04
Bra032494.1-P	Field mustard	extracellular	43.89	50.81
Bra019729.1-P	Field mustard	extracellular	37.47	50.54
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.49	50.33
Bra033008.1-P	Field mustard	extracellular	40.08	50.25
Zm00001d036945_P001	Maize	endoplasmic reticulum	42.28	50.24
Bra019209.1-P	Field mustard	endoplasmic reticulum, extracellular	41.28	49.52
Bra015000.1-P	Field mustard	golgi, plasma membrane	43.69	48.77
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	44.89	48.38
Bra019730.1-P	Field mustard	extracellular	37.27	48.31
HORVU7Hr1G019500.1	Barley	mitochondrion	50.1	48.08
Bra013585.1-P	Field mustard	extracellular	37.07	47.07
Bra020859.1-P	Field mustard	extracellular	36.47	46.08
Bra015070.1-P	Field mustard	endoplasmic reticulum, extracellular	43.89	44.51
Bra035588.1-P	Field mustard	extracellular	34.47	44.33
Bra012756.1-P	Field mustard	extracellular	34.47	44.22
Bra006976.1-P	Field mustard	cytosol	40.48	44.2
Bra028549.1-P	Field mustard	plasma membrane	41.48	42.24
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	40.28	40.94
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	40.08	40.82
Solyc02g067450.2.1	Tomato	extracellular	47.29	38.31
GSMUA_Achr7P08840_001	Banana	nucleus	51.3	38.21
Bra005799.1-P	Field mustard	extracellular, golgi	39.08	38.09
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	38.88	37.02

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	InterPro:AmbAllergen	EnsemblPlantsGene:Bra008721	EnsemblPlants:Bra008721.1
EnsemblPlants:Bra008721.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	UniProt:M4CWX4	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF7	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0002544FD0	SEG:seg	:

Description

AT5G15110 (E=1e-203) | lyase/ pectate lyase

Coordinates

chrA10:-:13570021..13571828

Molecular Weight (calculated)

56371.5 Da

IEP (calculated)

7.883

GRAVY (calculated)

-0.618

Length

499 amino acids

Sequence
(BLAST)

001: MEMARLLKLM CVFCIAGLIP TIKANISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDD TTTEEHSSNS TDVTATEEDN SNSTDVTATE
101: EDSSTKPEEE GTEVIEMVGN SKNSTRRSLK GKGKGKWSKL KGPCTASNPI DKCWRCRSNW ANRRKKLAKC VRGFGHGTTG GKRGRIYVVT SNLDEDMVNP
201: IPGTLRHAVI QKEPLWIIFK NDMSIRLSQE LLVNSDKTID ARGADVHIAH GAGITMQFVR NVIIHGLHIH HISESNGGMI RDSVDHFGMR TRADGDGLSI
301: YGSSNIWIDH VSMSKCQDGL IDAIVGSTAI TISNSHFTHH NDVMLLGAQN NMNEADQKMQ VTVAYNHFGK GLVQRMPRIR WGFVHVVNND YTHWELYAIG
401: GSQGPTILSH GNRFIAPPHL PYYKEVTKRD YASEDEWKHW TWRSEKDIFM NGAFFRQSGD PHYKSAHTRK QMIKPKNGYA VSKLTKYAGA LDCRVGRRC

Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)

001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC

Arabidopsis Description

Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.