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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 99.13 99.13
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 97.82 97.82
Bra026832.1-P Field mustard extracellular 84.28 85.4
Bra026221.1-P Field mustard endoplasmic reticulum 85.37 85.37
AT1G14420.1 Thale cress endoplasmic reticulum 83.84 83.66
Bra017412.1-P Field mustard extracellular 72.93 72.77
Bra024811.1-P Field mustard extracellular 72.71 72.55
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 71.62 71.77
TraesCS4A01G385700.1 Wheat cytosol 28.82 60.27
KRH45851 Soybean extracellular 57.86 58.76
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.11 58.54
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.11 58.01
KRH74782 Soybean extracellular 56.55 57.81
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 54.59 57.08
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.93 56.52
GSMUA_Achr10P... Banana extracellular 48.03 56.41
KRH69345 Soybean extracellular 55.02 56.38
GSMUA_Achr10P... Banana cytosol 42.36 56.07
Solyc03g058890.2.1 Tomato extracellular 54.59 55.68
PGSC0003DMT400017863 Potato extracellular 53.49 55.43
PGSC0003DMT400014086 Potato extracellular 53.93 55.26
Zm00001d000216_P001 Maize golgi, vacuole 52.62 55.02
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 51.97 54.97
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 53.06 54.85
PGSC0003DMT400003310 Potato extracellular 52.84 54.26
Solyc02g087670.2.1 Tomato extracellular 52.84 54.26
EER88571 Sorghum endoplasmic reticulum, plasma membrane 53.71 54.19
EES06507 Sorghum golgi, vacuole 52.4 53.93
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 46.72 53.9
OQU75805 Sorghum mitochondrion 51.97 53.85
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 52.62 53.79
Os06t0144200-01 Rice extracellular, plasma membrane 52.62 53.56
HORVU6Hr1G038630.1 Barley extracellular 47.16 53.33
TraesCS7D01G356700.1 Wheat extracellular 51.53 53.15
Os02t0214400-01 Rice plasma membrane 51.75 53.14
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.31 52.93
Os06t0583900-01 Rice plasma membrane 51.75 52.9
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 51.09 52.7
PGSC0003DMT400014085 Potato extracellular, golgi 45.63 52.51
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 50.44 52.03
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 53.49 52.02
Solyc03g058910.2.1 Tomato extracellular, golgi 45.2 52.01
Bra033980.1-P Field mustard extracellular 46.07 51.97
Bra004254.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 45.85 51.72
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 47.82 51.53
TraesCS6D01G170500.1 Wheat golgi 47.6 51.29
Bra013833.1-P Field mustard endoplasmic reticulum, vacuole 45.41 51.23
Bra039081.1-P Field mustard extracellular, plastid 46.07 51.21
Bra004073.1-P Field mustard extracellular 45.41 51.11
Bra035852.1-P Field mustard extracellular 45.63 50.98
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 52.84 50.95
Bra010482.1-P Field mustard endoplasmic reticulum, extracellular 44.98 50.74
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 50.0 50.55
Bra032696.1-P Field mustard endoplasmic reticulum, extracellular 45.41 50.36
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 51.09 50.32
Zm00001d036945_P001 Maize endoplasmic reticulum 46.07 50.24
Bra038614.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 45.2 50.12
Bra040809.1-P Field mustard endoplasmic reticulum, golgi, vacuole 45.85 49.65
Bra020672.1-P Field mustard extracellular 45.2 49.64
Bra036155.1-P Field mustard extracellular 45.2 49.52
Bra023504.1-P Field mustard extracellular 51.97 49.48
Bra025274.1-P Field mustard extracellular 44.32 49.27
Os06t0144900-01 Rice mitochondrion 50.87 49.26
Bra032494.1-P Field mustard extracellular 46.07 48.96
Bra033008.1-P Field mustard extracellular 42.36 48.74
Bra030583.1-P Field mustard endoplasmic reticulum, extracellular, golgi 45.85 48.72
Bra035588.1-P Field mustard extracellular 41.27 48.71
Bra015341.1-P Field mustard extracellular 45.63 48.49
Bra029614.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 42.79 48.4
Bra019729.1-P Field mustard extracellular 38.86 48.11
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 52.4 48.1
Bra032730.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 46.94 47.67
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 47.82 47.3
Bra019209.1-P Field mustard endoplasmic reticulum, extracellular 42.36 46.63
Bra019730.1-P Field mustard extracellular 38.86 46.23
HORVU7Hr1G019500.1 Barley mitochondrion 52.18 45.96
Bra013585.1-P Field mustard extracellular 38.65 45.04
Bra020859.1-P Field mustard extracellular 38.65 44.81
Bra015000.1-P Field mustard golgi, plasma membrane 43.67 44.74
Bra006976.1-P Field mustard cytosol 44.32 44.42
Bra015070.1-P Field mustard endoplasmic reticulum, extracellular 45.63 42.48
Bra003200.1-P Field mustard endoplasmic reticulum, extracellular 45.2 42.16
Bra007116.1-P Field mustard endoplasmic reticulum, extracellular 44.98 42.04
Bra028549.1-P Field mustard plasma membrane 44.76 41.84
Bra012756.1-P Field mustard extracellular 34.72 40.87
Solyc02g067450.2.1 Tomato extracellular 50.66 37.66
GSMUA_Achr7P08840_001 Banana nucleus 55.02 37.61
Bra005799.1-P Field mustard extracellular, golgi 41.7 37.3
Bra009469.1-P Field mustard extracellular, plastid, vacuole 42.36 37.02
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergenEnsemblPlantsGene:Bra016700EnsemblPlants:Bra016700.1
EnsemblPlants:Bra016700.1-PGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490
GO:GO:0046872InterPro:IPR012334UniProt:M4DJM2PFAM:PF00544PFAM:PF04431PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002545C72:
Description
AT1G14420 (E=7e-235) AT59 | AT59; lyase/ pectate lyase
Coordinates
chrA08:+:19608800..19610616
Molecular Weight (calculated)
51085.3 Da
IEP (calculated)
9.154
GRAVY (calculated)
-0.303
Length
458 amino acids
Sequence
(BLAST)
001: MTAAVLNIGG YLFVFCLSLL ATLTPHVGAN VAVFDNYWLQ RQGDALKQTI ASFDPNPLNV TDHLNYHVAL AVDATESTNS TRRELSQVRN GRKLKRSGKC
101: VAYNPIDRCW RCNGDWEKNR KKLADCVLGF GRRTTGGKDG PIYVVNDASD DDLINPKPGT LRHAVTRDGP LWIIFGSSMI INLQQELIIT SDKTIDGRGA
201: RVYIMEGAGL TLQFVNNVII HNIYVKHVVP KSGGLIRDSE QHIGLRTVSD GDGISLFGAT NVWIDHVSMT RCSDGMIDAI LGSTAITISN SHFTDHEEVM
301: LFGANDKHVI DKKMQITVAF NHFGKRLDQR MPRCRFGTIH VVNNDYTHWE MYAIGGNMNP TIISQGNRFI APPNEQAKQI TKREYTPYVN WKMWNWQSEG
401: DYFLNGAYFV QSGKQNAWSP KPINPVPKKF AIRPQPGTMV RKLTMDAGAL GCKPGTPC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.