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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 85.87 83.66
Zm00001d000216_P001 Maize golgi, vacuole 67.33 69.63
Os06t0144900-01 Rice mitochondrion 68.65 65.75
GSMUA_Achr10P... Banana cytosol 45.47 59.54
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 55.41 57.31
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.97 56.21
KRH54508 Soybean extracellular 41.06 55.86
GSMUA_Achr10P... Banana extracellular 47.9 55.64
KRH63402 Soybean extracellular 53.2 55.4
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.2 55.15
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 53.42 55.13
VIT_17s0000g05740.t01 Wine grape extracellular 51.88 54.78
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 52.32 54.48
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 52.32 54.48
KRH45851 Soybean extracellular 53.64 53.88
Solyc06g071020.2.1 Tomato extracellular 51.66 53.79
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 51.21 53.58
PGSC0003DMT400003310 Potato extracellular 52.32 53.14
PGSC0003DMT400083135 Potato extracellular 50.99 53.1
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 51.88 53.05
Solyc02g087670.2.1 Tomato extracellular 51.88 52.69
KRH74782 Soybean extracellular 52.1 52.68
PGSC0003DMT400017863 Potato extracellular 50.99 52.26
PGSC0003DMT400002241 Potato extracellular 50.11 51.71
PGSC0003DMT400014086 Potato extracellular 50.99 51.68
KRH69345 Soybean extracellular 50.77 51.45
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.03 51.39
KRH01130 Soybean extracellular 49.89 51.36
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 49.67 51.25
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 50.11 51.24
Solyc03g058890.2.1 Tomato extracellular 50.77 51.22
AT1G14420.1 Thale cress endoplasmic reticulum 51.88 51.2
KRG93502 Soybean extracellular 49.67 50.79
Solyc03g058910.2.1 Tomato extracellular, golgi 44.59 50.75
Bra026832.1-P Field mustard extracellular 50.55 50.66
PGSC0003DMT400014085 Potato extracellular, golgi 44.15 50.25
Zm00001d036945_P001 Maize endoplasmic reticulum 46.58 50.24
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.55 50.0
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.55 50.0
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.55 50.0
Zm00001d025067_P001 Maize mitochondrion 49.89 49.78
Bra026221.1-P Field mustard endoplasmic reticulum 50.11 49.56
Zm00001d004448_P001 Maize endoplasmic reticulum 49.01 49.55
Bra017412.1-P Field mustard extracellular 50.11 49.46
CDY39314 Canola extracellular 50.11 49.46
CDY04133 Canola extracellular 50.11 49.46
CDY17432 Canola extracellular 49.89 49.24
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 51.43 49.05
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 49.45 49.02
CDY03043 Canola extracellular 49.45 48.8
PGSC0003DMT400045436 Potato extracellular 49.45 48.8
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 50.77 48.73
CDX91953 Canola endoplasmic reticulum, extracellular 50.55 48.62
CDX74293 Canola endoplasmic reticulum, extracellular 50.55 48.62
CDY45202 Canola extracellular 49.23 48.58
Bra024811.1-P Field mustard extracellular 49.23 48.58
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 50.33 48.41
Solyc05g007080.2.1 Tomato extracellular 48.57 48.25
CDX70590 Canola endoplasmic reticulum, extracellular 50.55 48.21
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 49.89 48.19
AT2G02720.1 Thale cress extracellular, vacuole 48.12 47.91
CDX78607 Canola endoplasmic reticulum, extracellular 50.11 47.79
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 50.11 47.79
CDX85564 Canola extracellular 49.67 47.57
CDY63769 Canola extracellular 50.11 47.39
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 52.1 47.29
CDX69550 Canola endoplasmic reticulum, extracellular 52.1 47.29
CDY66593 Canola endoplasmic reticulum, extracellular 51.88 47.09
Bra023504.1-P Field mustard extracellular 49.89 46.99
CDY53552 Canola extracellular 50.33 46.06
CDX81636 Canola endoplasmic reticulum 49.01 45.87
Zm00001d032806_P001 Maize cytosol, plastid 41.28 43.29
Solyc02g067450.2.1 Tomato extracellular 47.9 35.23
GSMUA_Achr7P08840_001 Banana nucleus 51.43 34.78
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2EntrezGene:100284055Gene3D:2.160.20.10MapMan:21.3.5.2ProteinID:AQK80371.1InterPro:AmbAllergen
UniProt:B6TPL1EMBL:BT084825EMBL:EU966926GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872InterPro:IPR012334PFAM:PF00544PFAM:PF04431
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF60InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI000182E473EnsemblPlantsGene:Zm00001d036158
EnsemblPlants:Zm00001d036158_P001EnsemblPlants:Zm00001d036158_T001SEG:seg:::
Description
Probable pectate lyase 3
Coordinates
chr6:+:74947112..74948473
Molecular Weight (calculated)
50142.1 Da
IEP (calculated)
8.897
GRAVY (calculated)
-0.364
Length
453 amino acids
Sequence
(BLAST)
001: MAGSAVLRSP LSVLLYILAA VPATAAATPT DAAIDEAYAH LVNLTANQEY WAERAEAAHA YNRAAYQTDP VAVVQRFNDG VHRATATRSR SLAHRARGPC
101: TATNPIDQCW RCRRDWARDR KRLARCAMGF GHRTTGGLAG KFYVVIDPSD DAADLVTPRK GTLRHAVTRA RALWITFARD MVIELCQELI VSSDKTIDGR
201: GAQVHIVGAQ ITLQNVRNVI LHNLHVHDAA AHGGGAIRDS QHHWGVRGES DGDGVSVMGS SDIWIDHLSM SSCADGLVDA VDGSTAITVS NGHFTRHDHV
301: MLFGASDAAS KDREMQVTVA FNHFGKGLVQ RMPRCRHGFF HVVNNDYTHW LMYAIGGSRN PTIISQGNRF RAVDDSRFKE VTKREYTQYS EYKNWVWKSQ
401: DDLFLNGAFF NQSGGQNERK YDRLDLIQAK GGQYAESLTR YAGALNCRVG RKC
Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)
001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.