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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74293 Canola endoplasmic reticulum, extracellular 95.95 95.54
CDX91953 Canola endoplasmic reticulum, extracellular 95.95 95.54
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 89.55 88.42
CDY63769 Canola extracellular 78.89 77.24
CDX85564 Canola extracellular 77.83 77.17
CDX70590 Canola endoplasmic reticulum, extracellular 77.4 76.42
CDX78607 Canola endoplasmic reticulum, extracellular 77.19 76.21
CDY66593 Canola endoplasmic reticulum, extracellular 77.83 73.15
CDX69550 Canola endoplasmic reticulum, extracellular 77.4 72.75
GSMUA_Achr10P... Banana cytosol 43.71 59.25
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.44 58.69
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.8 58.54
TraesCS4A01G385700.1 Wheat cytosol 27.29 58.45
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.3 57.21
GSMUA_Achr10P... Banana extracellular 46.91 56.41
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 52.45 56.16
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 52.88 55.98
Solyc02g087670.2.1 Tomato extracellular 52.88 55.61
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 52.45 55.53
Solyc03g058890.2.1 Tomato extracellular 53.09 55.46
PGSC0003DMT400014086 Potato extracellular 52.67 55.26
PGSC0003DMT400017863 Potato extracellular 52.03 55.2
PGSC0003DMT400003310 Potato extracellular 52.45 55.16
CDY70583 Canola cytosol 28.57 55.14
CDY11033 Canola endoplasmic reticulum, extracellular 47.55 54.93
KRG93502 Soybean extracellular 51.81 54.85
CDY18330 Canola cytosol 17.06 54.79
CDX92652 Canola endoplasmic reticulum, extracellular 47.33 54.68
Os06t0583900-01 Rice plasma membrane 52.03 54.46
CDY03419 Canola endoplasmic reticulum, extracellular 47.12 54.43
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 46.06 54.41
HORVU6Hr1G038630.1 Barley extracellular 46.91 54.32
KRH01130 Soybean extracellular 50.96 54.32
CDY04133 Canola extracellular 53.09 54.25
CDY08948 Canola endoplasmic reticulum, extracellular 46.91 54.19
CDY34310 Canola endoplasmic reticulum, vacuole 46.91 54.19
CDY17432 Canola extracellular 52.88 54.03
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 47.55 54.0
CDY09356 Canola extracellular 52.45 53.83
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 47.12 53.64
CDY41679 Canola endoplasmic reticulum, plasma membrane 52.24 53.61
CDY03043 Canola extracellular 52.45 53.59
EES06507 Sorghum golgi, vacuole 50.75 53.48
CDY33938 Canola extracellular 47.55 53.48
CDY24847 Canola endoplasmic reticulum, extracellular 46.27 53.45
CDY28857 Canola extracellular 46.27 53.32
CDY56520 Canola extracellular 46.27 53.32
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 52.03 53.28
CDY05655 Canola extracellular 47.33 53.24
CDY45202 Canola extracellular 52.03 53.16
CDY00156 Canola extracellular, plastid 46.7 53.16
CDY20049 Canola plastid, vacuole 46.7 53.16
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.32 53.15
Os02t0214400-01 Rice plasma membrane 50.53 53.14
CDY19932 Canola extracellular 47.33 53.11
CDY56668 Canola extracellular 47.33 53.11
TraesCS6D01G170500.1 Wheat golgi 47.97 52.94
TraesCS7D01G356700.1 Wheat extracellular 50.11 52.93
EER88571 Sorghum endoplasmic reticulum, plasma membrane 51.17 52.86
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 51.6 52.84
CDY12666 Canola extracellular 45.63 52.71
CDY32557 Canola extracellular 45.63 52.71
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.63 52.71
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 49.89 52.7
CDY03964 Canola extracellular 46.27 52.67
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.7 52.64
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.68 52.48
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 45.42 52.46
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 48.4 52.42
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 46.48 52.4
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 47.33 52.24
OQU75805 Sorghum mitochondrion 49.04 52.04
Os06t0144200-01 Rice extracellular, plasma membrane 49.89 52.0
Zm00001d000216_P001 Maize golgi, vacuole 48.4 51.83
CDY34149 Canola extracellular 39.66 51.81
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 49.25 51.56
CDY45254 Canola endoplasmic reticulum 50.32 51.53
CDY48132 Canola endoplasmic reticulum, golgi 46.7 51.17
CDY01119 Canola endoplasmic reticulum, extracellular 47.33 51.03
CDY39314 Canola extracellular 49.89 50.98
CDY16732 Canola endoplasmic reticulum, golgi 46.48 50.93
CDY47327 Canola endoplasmic reticulum, extracellular 46.91 50.81
CDX89799 Canola extracellular 46.27 50.35
CDY61137 Canola extracellular 46.27 50.35
PGSC0003DMT400014085 Potato extracellular, golgi 42.64 50.25
Solyc03g058910.2.1 Tomato extracellular, golgi 42.64 50.25
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.68 50.11
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 48.19 49.89
CDY46471 Canola endoplasmic reticulum, extracellular 46.7 49.89
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 45.84 49.88
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 45.84 49.88
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 34.54 49.54
Zm00001d036945_P001 Maize endoplasmic reticulum 44.35 49.52
CDX81636 Canola endoplasmic reticulum 50.96 49.38
CDY65626 Canola golgi 47.76 49.34
CDY53552 Canola extracellular 51.6 48.89
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 48.19 48.81
Os06t0144900-01 Rice mitochondrion 49.04 48.63
CDX98092 Canola extracellular 36.67 48.31
CDY30040 Canola extracellular 36.67 48.31
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.48 48.23
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.7 48.13
CDX98091 Canola extracellular 37.95 47.98
CDY30041 Canola extracellular 37.53 47.44
CDX79122 Canola extracellular 40.09 46.88
CDY18738 Canola endoplasmic reticulum, extracellular 47.55 46.85
CDY66697 Canola endoplasmic reticulum, golgi 44.56 46.76
CDX77470 Canola golgi, plasma membrane 44.99 45.97
CDY20748 Canola extracellular 37.31 45.1
HORVU7Hr1G019500.1 Barley mitochondrion 49.89 45.0
CDY06557 Canola extracellular 37.1 44.96
CDX76388 Canola extracellular 39.02 44.85
CDY27438 Canola extracellular 38.59 44.36
CDX77400 Canola endoplasmic reticulum, extracellular 46.48 44.31
CDX73573 Canola extracellular 43.28 42.65
CDX78152 Canola extracellular 43.07 42.44
CDX70244 Canola vacuole 39.87 42.4
CDX67560 Canola plasma membrane 43.92 42.04
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 42.86 40.85
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 42.43 40.53
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 42.43 40.45
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 42.64 38.68
GSMUA_Achr7P08840_001 Banana nucleus 54.37 38.06
CDY11284 Canola extracellular, golgi 41.15 37.84
CDY13312 Canola plasma membrane 43.07 37.69
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.72 37.09
Solyc02g067450.2.1 Tomato extracellular 48.61 37.01
CDY41382 Canola endoplasmic reticulum, golgi 40.94 36.43
CDY70492 Canola endoplasmic reticulum, extracellular 1.07 9.09
CDX81635 Canola mitochondrion, nucleus 0.43 1.32
CDX96858 Canola mitochondrion, nucleus 0.43 1.32
CDY04136 Canola mitochondrion, nucleus 0.43 1.32
CDY09355 Canola mitochondrion, nucleus 0.43 1.32
CDY41678 Canola mitochondrion, nucleus 0.43 1.32
CDY45199 Canola mitochondrion, nucleus 0.43 1.32
CDY45253 Canola mitochondrion, nucleus 0.43 1.32
CDY53553 Canola mitochondrion, nucleus 0.43 1.32
CDY66531 Canola mitochondrion, nucleus 0.43 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078GT50UniProt:A0A078GT50InterPro:AmbAllergen
EnsemblPlants:CDY28691ProteinID:CDY28691ProteinID:CDY28691.1ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00041321001InterPro:IPR012334
PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7InterPro:Pec_lyase
InterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTM
UniPathway:UPA00545UniParc:UPI0004EEE90BSEG:seg:::
Description
BnaCnng05770DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078GT50]
Coordinates
chrLK032225:+:251498..253620
Molecular Weight (calculated)
53393.8 Da
IEP (calculated)
9.614
GRAVY (calculated)
-0.574
Length
469 amino acids
Sequence
(BLAST)
001: METARLLVCV ICIASLIPTL RANVAETDEY WVTKANEARR RTLMAYHPDP YQIVDHFHER HYDNSTDVEE MEENASEEED DIEMISSATN STRRSLRGRG
101: KGKGRGKWSK LKGPCTASNP IDKCWRCQPD WARRRKKLVK CVRGFGYKTT GGKRGRIYVV TSNRDDDTVN PRPGTLRHAV IQNEPLWIIF KHDMSIRLCQ
201: ELMINSHKTI DARGTNVHIA YGAGITMQYV HNIIIHGLHI HHIVQGRGGM IRNSNDHFGF RGVADGDGIS IFGATNIWLD HISMSKCQDG LIDAIMGSTG
301: ITISNSHFTH HNDVMLLGAQ NDNHADKKMQ VTVAFNHFGK GLVQRMPRIR WGFVHVVNND YTHWELYAIG GSQSPTILSH GNRFIAPPHL QHYREVTKRD
401: SAPESEWKNW NWRSEKDIFM NNAYFRQSGN PKFMCSHSRQ QMIKPKHGVA VSKLTKYAGA LDCRVGKPC
Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)
001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.