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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 97.14 97.79
CDY18738 Canola endoplasmic reticulum, extracellular 90.33 86.34
AT4G13710.1 Thale cress endoplasmic reticulum, extracellular, vacuole 89.01 86.17
HORVU2Hr1G002930.1 Barley cytosol 50.77 84.31
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 75.82 80.23
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 62.86 79.44
GSMUA_Achr8P12860_001 Banana cytosol 60.88 78.47
CDY70492 Canola endoplasmic reticulum, extracellular 9.45 78.18
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 73.85 77.96
GSMUA_Achr5P15620_001 Banana cytosol 59.78 77.49
CDY61137 Canola extracellular 73.19 77.26
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 72.97 77.03
KRG90246 Soybean nucleus 75.82 77.01
CDX89799 Canola extracellular 72.75 76.8
KRH33474 Soybean nucleus 75.6 76.44
GSMUA_Achr4P26690_001 Banana extracellular 61.32 76.02
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 69.23 75.72
GSMUA_Achr11P... Banana extracellular 60.44 75.55
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 69.01 75.48
Solyc09g091430.2.1 Tomato nucleus 74.73 75.39
PGSC0003DMT400076251 Potato extracellular 74.07 75.22
CDY66697 Canola endoplasmic reticulum, golgi 73.85 75.17
CDY05655 Canola extracellular 68.57 74.82
CDY33938 Canola extracellular 68.57 74.82
CDY56668 Canola extracellular 68.35 74.4
CDY19932 Canola extracellular 68.13 74.16
CDX77470 Canola golgi, plasma membrane 74.07 73.42
CDY18330 Canola cytosol 23.52 73.29
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 71.43 72.71
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 65.49 72.51
CDY46471 Canola endoplasmic reticulum, extracellular 69.67 72.21
Zm00001d025067_P001 Maize mitochondrion 71.21 71.37
Zm00001d004448_P001 Maize endoplasmic reticulum 70.11 71.21
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 70.33 70.48
CDY47327 Canola endoplasmic reticulum, extracellular 66.81 70.21
CDY01119 Canola endoplasmic reticulum, extracellular 66.81 69.89
CDY34310 Canola endoplasmic reticulum, vacuole 61.98 69.46
CDY03419 Canola endoplasmic reticulum, extracellular 61.76 69.21
CDY12666 Canola extracellular 61.76 69.21
CDY70583 Canola cytosol 36.92 69.14
CDY08948 Canola endoplasmic reticulum, extracellular 61.54 68.97
CDY32557 Canola extracellular 61.54 68.97
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 61.54 68.97
CDY56520 Canola extracellular 61.54 68.8
CDY28857 Canola extracellular 61.32 68.55
CDY11033 Canola endoplasmic reticulum, extracellular 61.1 68.47
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 60.88 68.23
CDY24847 Canola endoplasmic reticulum, extracellular 60.88 68.23
TraesCS2D01G018000.1 Wheat golgi 70.77 68.08
CDX92652 Canola endoplasmic reticulum, extracellular 60.66 67.98
KXG25802 Sorghum plastid 72.31 67.98
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 61.32 67.55
TraesCS2B01G024500.2 Wheat golgi 70.99 67.15
TraesCS2A01G016500.1 Wheat golgi 70.77 66.94
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 59.12 65.29
CDY16732 Canola endoplasmic reticulum, golgi 61.1 64.95
CDY48132 Canola endoplasmic reticulum, golgi 60.88 64.72
CDX77400 Canola endoplasmic reticulum, extracellular 69.89 64.63
CDY00156 Canola extracellular, plastid 58.46 64.56
CDY20049 Canola plastid, vacuole 58.24 64.32
CDY03964 Canola extracellular 57.58 63.59
CDY34149 Canola extracellular 49.45 62.67
HORVU2Hr1G002880.2 Barley mitochondrion 69.89 62.35
CDY65626 Canola golgi 61.1 61.23
CDY06557 Canola extracellular 47.47 55.81
CDY20748 Canola extracellular 47.47 55.67
CDX98092 Canola extracellular 42.64 54.49
CDY30040 Canola extracellular 42.42 54.21
CDX98091 Canola extracellular 43.74 53.64
CDY30041 Canola extracellular 43.52 53.37
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 38.24 53.21
CDX78152 Canola extracellular 55.38 52.94
CDX70244 Canola vacuole 51.21 52.83
CDX73573 Canola extracellular 55.16 52.73
CDX67560 Canola plasma membrane 55.6 51.63
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 54.07 50.1
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 54.07 50.0
CDY27438 Canola extracellular 44.18 49.26
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 52.97 48.98
CDX70590 Canola endoplasmic reticulum, extracellular 50.77 48.63
CDX78607 Canola endoplasmic reticulum, extracellular 50.77 48.63
CDX79122 Canola extracellular 42.64 48.38
CDX76388 Canola extracellular 43.3 48.28
CDX85564 Canola extracellular 49.45 47.57
CDY17432 Canola extracellular 47.91 47.49
CDY63769 Canola extracellular 49.67 47.18
CDY04133 Canola extracellular 47.47 47.06
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 47.25 46.94
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.19 46.81
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 48.13 46.7
CDY11284 Canola extracellular, golgi 52.31 46.67
CDY45202 Canola extracellular 47.03 46.62
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 46.81 46.51
CDX74293 Canola endoplasmic reticulum, extracellular 48.13 46.5
CDX91953 Canola endoplasmic reticulum, extracellular 48.13 46.5
CDY03043 Canola extracellular 46.59 46.19
CDY13312 Canola plasma membrane 54.29 46.08
CDY45254 Canola endoplasmic reticulum 46.37 46.07
CDY39314 Canola extracellular 46.15 45.75
CDX69550 Canola endoplasmic reticulum, extracellular 50.11 45.69
CDY41382 Canola endoplasmic reticulum, golgi 52.75 45.54
CDY66593 Canola endoplasmic reticulum, extracellular 49.89 45.49
CDY58428 Canola endoplasmic reticulum, golgi, plastid 51.43 45.44
CDY09356 Canola extracellular 44.84 44.64
CDY41679 Canola endoplasmic reticulum, plasma membrane 44.62 44.42
CDX81636 Canola endoplasmic reticulum 46.15 43.39
CDY53552 Canola extracellular 46.37 42.63
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078IVZ9UniProt:A0A078IVZ9InterPro:AmbAllergen
EnsemblPlants:CDY53564ProteinID:CDY53564ProteinID:CDY53564.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00010932001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF63InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEB85ASEG:seg
Description
BnaC04g55760DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078IVZ9]
Coordinates
chrLK033214:+:53098..56699
Molecular Weight (calculated)
50320.8 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.325
Length
455 amino acids
Sequence
(BLAST)
001: MASSSQKVTS VCLTVLVLLA LSATILRKIE IPSSRKLKTE ELQSSKNSST MAANRLEGVE LNKQHAVDDP DKVADEVSTL VKVLIFRSEH NITARRKLGF
101: FSCGTGNPID DCWRCDRNWH KNRKRLADCG IGFGRNAVGG RDGRFYVVTD PTDEDVINPK PGTLRHAVIQ DEPLWIVFKR DMVIELKQEL IMNSFKTIDG
201: RGANVHIANG ACITIQFITN VIIHGLHIHD CKPTGNAMVR SSPSHFGWRT MADGDAVSIF QSSHIWIDHN SLSHCADGLV DAVMGSTAIT VSNNHFTHHN
301: EVMLLGHSDS YTKDKLMQVT IAYNHFGEGL VQRMPRCRHG YFHVVNNDYT HWEMYAIGGS ADPTINSQGN RYAAPKNPFA KEVTKRVETD ASEWQKWNWR
401: SEGDLLLNGA FFKASGAEAS ASYGRASSLA AKPSSMVHTI TSTAGALGCR RGRPC
Best Arabidopsis Sequence Match ( AT4G13710.2 )
(BLAST)
001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE EFQSLNSSTM AATRLDGEPQ QQQHAVADDP DMVADEVAKL VQMSEQNRTA RRKLGFFSCG
101: TGNPIDDCWR CDRNWHKNRK RLADCGIGFG RNAIGGRDGR FYIVTDPTDE DVVNPKPGTL RHAVIQEEPL WIVFKRDMVI ELKQELIMNS FKTIDARGSN
201: VHIANGACIT IQFITNVIIH GLHIHDCKPT GNAMVRSSPS HFGWRTMADG DAVSIFGSSH IWIDHNSLSH CADGLVDAVM GSTAITVSNN HFTHHNEVML
301: LGHSDSYTKD KLMQVTIAYN HFGEGLVQRM PRCRHGYFHV VNNDYTHWEM YAIGGSAEPT INSQGNRYAA PMDRFAKEVT KRVETDASEW KKWNWRSEGD
401: LLLNGAFFRP SGAGASASYG RASSLAAKPS SMVDTITSTA GALGCRKGRP C
Arabidopsis Description
Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.