Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU2Hr1G002930.1 | Barley | cytosol | 52.8 | 86.13 |
GSMUA_Achr3P00290_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 78.75 | 85.64 |
GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 68.46 | 85.0 |
GSMUA_Achr8P12860_001 | Banana | cytosol | 65.1 | 82.44 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum, golgi | 83.67 | 82.38 |
GSMUA_Achr5P15620_001 | Banana | cytosol | 63.76 | 81.2 |
GSMUA_Achr11P... | Banana | extracellular | 65.77 | 80.77 |
GSMUA_Achr4P26690_001 | Banana | extracellular | 65.77 | 80.11 |
VIT_05s0051g00590.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 75.62 | 78.6 |
Zm00001d004448_P001 | Maize | endoplasmic reticulum | 75.84 | 75.67 |
Zm00001d025067_P001 | Maize | mitochondrion | 76.73 | 75.55 |
KRG90246 | Soybean | nucleus | 74.72 | 74.55 |
Bra040809.1-P | Field mustard | endoplasmic reticulum, golgi, vacuole | 70.47 | 74.47 |
KRH33474 | Soybean | nucleus | 74.5 | 74.0 |
GSMUA_Achr6P28260_001 | Banana | endoplasmic reticulum, extracellular | 66.67 | 73.22 |
AT1G04680.1 | Thale cress | extracellular | 70.47 | 73.09 |
PGSC0003DMT400076251 | Potato | extracellular | 72.93 | 72.77 |
Solyc09g091430.2.1 | Tomato | nucleus | 73.38 | 72.73 |
CDX89799 | Canola | extracellular | 69.8 | 72.39 |
Bra015341.1-P | Field mustard | extracellular | 69.57 | 72.16 |
Bra030583.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi | 69.57 | 72.16 |
CDY15517 | Canola | endoplasmic reticulum, extracellular, golgi | 69.57 | 72.16 |
CDY61137 | Canola | extracellular | 69.57 | 72.16 |
KXG25802 | Sorghum | plastid | 78.08 | 72.11 |
TraesCS2D01G018000.1 | Wheat | golgi | 76.29 | 72.09 |
Bra032730.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 72.71 | 72.06 |
CDX86615 | Canola | endoplasmic reticulum, extracellular, golgi | 69.35 | 71.93 |
TraesCS2A01G016500.1 | Wheat | golgi | 77.18 | 71.73 |
CDY01151 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.48 | 71.68 |
CDY53564 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.71 | 71.43 |
TraesCS2B01G024500.2 | Wheat | golgi | 76.73 | 71.31 |
Bra032494.1-P | Field mustard | extracellular | 68.23 | 70.77 |
AT4G13710.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 73.15 | 69.57 |
CDY18738 | Canola | endoplasmic reticulum, extracellular | 73.15 | 68.7 |
HORVU2Hr1G002880.2 | Barley | mitochondrion | 76.06 | 66.67 |
Bra015000.1-P | Field mustard | golgi, plasma membrane | 65.1 | 65.1 |
CDY66697 | Canola | endoplasmic reticulum, golgi | 64.65 | 64.65 |
AT3G24230.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 64.43 | 63.72 |
CDX77470 | Canola | golgi, plasma membrane | 65.1 | 63.4 |
GSMUA_Achr10P... | Banana | cytosol | 42.28 | 54.62 |
GSMUA_Achr2P16830_001 | Banana | endoplasmic reticulum, extracellular | 53.02 | 54.11 |
GSMUA_Achr10P... | Banana | extracellular | 46.31 | 53.08 |
GSMUA_Achr6P00830_001 | Banana | endoplasmic reticulum, extracellular | 51.23 | 52.4 |
GSMUA_Achr4P25120_001 | Banana | extracellular | 50.34 | 50.34 |
GSMUA_Achr1P03320_001 | Banana | plasma membrane | 49.89 | 43.64 |
GSMUA_Achr7P08840_001 | Banana | nucleus | 51.45 | 34.33 |
Protein Annotations
KEGG:00040+4.2.2.2 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | InterPro:AmbAllergen | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
GO:GO:0016829 | GO:GO:0030570 | GO:GO:0045490 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G04580_001 | EnsemblPlants:GSMUA_Achr7P04580_001 |
EnsemblPlants:GSMUA_Achr7T04580_001 | InterPro:IPR012334 | UniProt:M0TEP8 | PFAM:PF00544 | PRINTS:PR00807 | PANTHER:PTHR31683 |
PANTHER:PTHR31683:SF34 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence | SMART:SM00656 | SUPFAM:SSF51126 |
SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000296C3AC | SEG:seg | : | : |
Description
Probable pectate lyase 15 [Source:GMGC_GENE;Acc:GSMUA_Achr7G04580_001]
Coordinates
chr7:+:3460147..3462568
Molecular Weight (calculated)
48043.5 Da
IEP (calculated)
6.555
GRAVY (calculated)
-0.173
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEGSKCGPS LLLLLLLLGL LLVSAISSDS RNGGASRRSL REAKANATSA AAPVEARAVA GTAEAAVDDP EEVASAVQMI ISNSTARRSL GYLSCGTGNP
101: IDDCWRCDPD WHLNRKRLAD CGIGFGRNAL GGRDGQYYVV TDAGDDDPVN PRPGTLRYAV IQDEPLWITF ERDMVITLKE ELIMNSFKTV DGRGANVHIA
201: NGACITIQDI TNVIIHGLHI HDCKPTGNAM VRSSPSHYGW RTMADGDGVS IFSSSHIWVD HCSLSNCADG LVDAVVGSTA ITISNNYFTH HNEVMLLGHS
301: DSYVRDKSMQ VTIAFNHFGE GLIQRMPRCR HGYFHVVNND YTHWEMYAIG GSANPTINSQ GNRYLAPTDP FAKEVTKRVD TDASVWKSWN WRSEGDLLLN
401: GAYFTPSGAG ASASYARASS LGAKPSSLVA TLTSNAGVLS CRAGAQC
101: IDDCWRCDPD WHLNRKRLAD CGIGFGRNAL GGRDGQYYVV TDAGDDDPVN PRPGTLRYAV IQDEPLWITF ERDMVITLKE ELIMNSFKTV DGRGANVHIA
201: NGACITIQDI TNVIIHGLHI HDCKPTGNAM VRSSPSHYGW RTMADGDGVS IFSSSHIWVD HCSLSNCADG LVDAVVGSTA ITISNNYFTH HNEVMLLGHS
301: DSYVRDKSMQ VTIAFNHFGE GLIQRMPRCR HGYFHVVNND YTHWEMYAIG GSANPTINSQ GNRYLAPTDP FAKEVTKRVD TDASVWKSWN WRSEGDLLLN
401: GAYFTPSGAG ASASYARASS LGAKPSSLVA TLTSNAGVLS CRAGAQC
001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE VIQSSNSSTM AAIRKLKTEE FQSLNSSTMA ATRLDGEPQQ QQHAVADDPD MVADEVAKLV
101: QMSEQNRTAR RKLGFFSCGT GNPIDDCWRC DRNWHKNRKR LADCGIGFGR NAIGGRDGRF YIVTDPTDED VVNPKPGTLR HAVIQEEPLW IVFKRDMVIE
201: LKQELIMNSF KTIDARGSNV HIANGACITI QFITNVIIHG LHIHDCKPTG NAMVRSSPSH FGWRTMADGD AVSIFGSSHI WIDHNSLSHC ADGLVDAVMG
301: STAITVSNNH FTHHNEVMLL GHSDSYTKDK LMQVTIAYNH FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSAEPTI NSQGNRYAAP MDRFAKEVTK
401: RVETDASEWK KWNWRSEGDL LLNGAFFRPS GAGASASYGR ASSLAAKPSS MVDTITSTAG ALGCRKGRPC
101: QMSEQNRTAR RKLGFFSCGT GNPIDDCWRC DRNWHKNRKR LADCGIGFGR NAIGGRDGRF YIVTDPTDED VVNPKPGTLR HAVIQEEPLW IVFKRDMVIE
201: LKQELIMNSF KTIDARGSNV HIANGACITI QFITNVIIHG LHIHDCKPTG NAMVRSSPSH FGWRTMADGD AVSIFGSSHI WIDHNSLSHC ADGLVDAVMG
301: STAITVSNNH FTHHNEVMLL GHSDSYTKDK LMQVTIAYNH FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSAEPTI NSQGNRYAAP MDRFAKEVTK
401: RVETDASEWK KWNWRSEGDL LLNGAFFRPS GAGASASYGR ASSLAAKPSS MVDTITSTAG ALGCRKGRPC
Arabidopsis Description
Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.