CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025067_P001	Maize	mitochondrion	89.67	95.59
HORVU2Hr1G002930.1	Barley	cytosol	53.51	94.53
Zm00001d004448_P001	Maize	endoplasmic reticulum	85.74	92.63
TraesCS2D01G018000.1	Wheat	golgi	83.26	85.2
TraesCS2A01G016500.1	Wheat	golgi	84.09	84.62
TraesCS2B01G024500.2	Wheat	golgi	83.47	83.99
VIT_05s0051g00590.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	69.83	78.6
GSMUA_Achr3P00290_001	Banana	endoplasmic reticulum, extracellular, vacuole	66.74	78.59
GSMUA_Achr7P04580_001	Banana	endoplasmic reticulum, extracellular	72.11	78.08
HORVU2Hr1G002880.2	Barley	mitochondrion	82.02	77.84
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	71.49	76.21
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	65.7	75.18
KRH33474	Soybean	nucleus	69.63	74.89
KRG90246	Soybean	nucleus	69.21	74.78
PGSC0003DMT400076251	Potato	extracellular	67.77	73.21
AT1G04680.1	Thale cress	extracellular	65.08	73.09
Solyc09g091430.2.1	Tomato	nucleus	67.77	72.73
CDY01151	Canola	endoplasmic reticulum, extracellular, vacuole	67.56	72.35
CDY53564	Canola	endoplasmic reticulum, extracellular, vacuole	67.98	72.31
CDY61137	Canola	extracellular	64.26	72.16
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	67.15	72.06
CDY15517	Canola	endoplasmic reticulum, extracellular, golgi	64.05	71.93
CDX89799	Canola	extracellular	64.05	71.93
Bra032494.1-P	Field mustard	extracellular	64.05	71.93
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	64.05	71.93
Bra015341.1-P	Field mustard	extracellular	63.84	71.69
CDX86615	Canola	endoplasmic reticulum, extracellular, golgi	63.64	71.46
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	68.18	70.21
CDY18738	Canola	endoplasmic reticulum, extracellular	67.56	68.7
Bra015000.1-P	Field mustard	golgi, plasma membrane	60.54	65.55
CDY66697	Canola	endoplasmic reticulum, golgi	59.92	64.88
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	60.54	64.82
CDX77470	Canola	golgi, plasma membrane	60.74	64.05
KXG22892	Sorghum	cytosol	32.23	56.32
KXG38421	Sorghum	extracellular	52.27	52.49
OQU75805	Sorghum	mitochondrion	46.28	50.68
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	47.11	50.22
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	46.69	48.6
EES06507	Sorghum	golgi, vacuole	44.63	48.54

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A1B6PJF1	InterPro:AmbAllergen	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872	InterPro:IPR012334
EnsemblPlants:KXG25802	ProteinID:KXG25802	ProteinID:KXG25802.1	PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683
PANTHER:PTHR31683:SF34	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	EnsemblPlantsGene:SORBI_3006G014400
SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI00081ACD07	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:2075896..2082204

Molecular Weight (calculated)

51661.7 Da

IEP (calculated)

7.594

GRAVY (calculated)

-0.178

Length

484 amino acids

Sequence
(BLAST)

001: MAAETGSSAA RTRTAGLAAA AAVTALLVLV VVVGSAALPG GRVTVLDGLR HRSTAVVAGG ARRWLRDSSS WPAAAAATTT TRGSRADGDA DGSASSTPVV
101: AGAVEDPEAV ANDVHVSIRN STARRNLGYL SCGTGNPIDD CWRCDSDWHN NRQRLADCGI GFGRNAIGGR DGKIYVVTDP SDDDPVNPRK GTLRYAVIQE
201: EPLWIIFKRD MVITLKEELI MNSFKTIDGR GANVHIANGA CITIQYITNV IIHGLHIHDC KPTGNAMVRS SPSHYGWRTM ADGDAVSIFG SSHVWVDHCS
301: LSNCADGLID AIMGSTAITV SNNYFTHHNE VMLLGHSDSY VKDKAMQVTI AFNHFGEGLI QRMPRCRHGY FHVVNNDYTH WEMYAIGGSA EPTINSQGNR
401: YLAPTNPFAK EVTKRVETAQ TVWKSWNWRS EGDLLLNGAY FTPSGAGASA SYSRASSLGA KSSSMVGTIT SDAGALSCHK GTAC

Best Arabidopsis Sequence Match ( AT4G13710.1 )
(BLAST)

001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE VIQSSNSSTM AAIRKLKTEE FQSLNSSTMA ATRLDGEPQQ QQHAVADDPD MVADEVAKLV
101: QMSEQNRTAR RKLGFFSCGT GNPIDDCWRC DRNWHKNRKR LADCGIGFGR NAIGGRDGRF YIVTDPTDED VVNPKPGTLR HAVIQEEPLW IVFKRDMVIE
201: LKQELIMNSF KTIDARGSNV HIANGACITI QFITNVIIHG LHIHDCKPTG NAMVRSSPSH FGWRTMADGD AVSIFGSSHI WIDHNSLSHC ADGLVDAVMG
301: STAITVSNNH FTHHNEVMLL GHSDSYTKDK LMQVTIAYNH FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSAEPTI NSQGNRYAAP MDRFAKEVTK
401: RVETDASEWK KWNWRSEGDL LLNGAFFRPS GAGASASYGR ASSLAAKPSS MVDTITSTAG ALGCRKGRPC

Arabidopsis Description

Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.