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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040809.1-P Field mustard endoplasmic reticulum, golgi, vacuole 88.03 99.05
CDY70492 Canola endoplasmic reticulum, extracellular 11.13 96.36
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 85.92 90.49
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 86.34 90.33
AT4G13710.1 Thale cress endoplasmic reticulum, extracellular, vacuole 87.39 88.51
HORVU2Hr1G002930.1 Barley cytosol 48.32 83.94
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 72.27 80.0
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 59.87 79.17
GSMUA_Achr8P12860_001 Banana cytosol 58.4 78.75
KRG90246 Soybean nucleus 73.11 77.68
GSMUA_Achr4P26690_001 Banana extracellular 59.24 76.84
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 69.54 76.8
CDY61137 Canola extracellular 69.33 76.57
CDY05655 Canola extracellular 67.02 76.5
KRH33474 Soybean nucleus 72.27 76.44
CDX89799 Canola extracellular 69.12 76.33
CDY33938 Canola extracellular 66.81 76.26
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 66.6 76.2
GSMUA_Achr5P15620_001 Banana cytosol 56.09 76.07
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 66.39 75.96
GSMUA_Achr11P... Banana extracellular 57.98 75.82
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 68.49 75.64
Solyc09g091430.2.1 Tomato nucleus 71.22 75.17
CDY19932 Canola extracellular 65.97 75.12
PGSC0003DMT400076251 Potato extracellular 70.59 75.0
CDY56668 Canola extracellular 65.76 74.88
CDY66697 Canola endoplasmic reticulum, golgi 69.33 73.83
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 68.7 73.15
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 62.82 72.75
CDY18330 Canola cytosol 22.27 72.6
CDY46471 Canola endoplasmic reticulum, extracellular 66.6 72.21
CDX77470 Canola golgi, plasma membrane 69.54 72.11
Zm00001d004448_P001 Maize endoplasmic reticulum 66.81 70.98
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 67.65 70.93
Zm00001d025067_P001 Maize mitochondrion 67.65 70.93
CDY47327 Canola endoplasmic reticulum, extracellular 64.29 70.67
CDY01119 Canola endoplasmic reticulum, extracellular 64.08 70.11
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 59.66 69.95
CDY34310 Canola endoplasmic reticulum, vacuole 59.24 69.46
CDY28857 Canola extracellular 59.24 69.29
CDY56520 Canola extracellular 59.24 69.29
CDY03419 Canola endoplasmic reticulum, extracellular 59.03 69.21
CDY70583 Canola cytosol 35.29 69.14
CDY08948 Canola endoplasmic reticulum, extracellular 58.82 68.97
CDY12666 Canola extracellular 58.82 68.97
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 58.61 68.72
CDY11033 Canola endoplasmic reticulum, extracellular 58.61 68.72
CDY32557 Canola extracellular 58.61 68.72
CDY24847 Canola endoplasmic reticulum, extracellular 58.4 68.47
CDX92652 Canola endoplasmic reticulum, extracellular 58.19 68.23
TraesCS2D01G018000.1 Wheat golgi 67.23 67.65
KXG25802 Sorghum plastid 68.7 67.56
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 58.4 67.31
TraesCS2B01G024500.2 Wheat golgi 67.65 66.94
TraesCS2A01G016500.1 Wheat golgi 67.44 66.74
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 56.93 65.78
CDY00156 Canola extracellular, plastid 56.09 64.81
CDY16732 Canola endoplasmic reticulum, golgi 58.19 64.72
CDY20049 Canola plastid, vacuole 55.88 64.56
CDY48132 Canola endoplasmic reticulum, golgi 57.98 64.49
CDX77400 Canola endoplasmic reticulum, extracellular 66.39 64.23
CDY03964 Canola extracellular 55.46 64.08
CDY34149 Canola extracellular 47.48 62.95
HORVU2Hr1G002880.2 Barley mitochondrion 66.39 61.96
CDY65626 Canola golgi 58.61 61.45
CDX98091 Canola extracellular 42.44 54.45
CDX98092 Canola extracellular 40.55 54.21
CDY30041 Canola extracellular 42.23 54.18
CDY30040 Canola extracellular 40.34 53.93
CDY06557 Canola extracellular 43.7 53.75
CDY20748 Canola extracellular 43.7 53.61
CDX70244 Canola vacuole 49.58 53.51
CDX73573 Canola extracellular 52.94 52.94
CDX78152 Canola extracellular 52.94 52.94
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 35.92 52.29
CDX67560 Canola plasma membrane 53.57 52.04
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 51.89 50.31
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 51.89 50.2
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 51.05 49.39
CDY27438 Canola extracellular 41.6 48.53
CDX70590 Canola endoplasmic reticulum, extracellular 48.32 48.42
CDX78607 Canola endoplasmic reticulum, extracellular 48.32 48.42
CDX76388 Canola extracellular 41.18 48.04
CDX85564 Canola extracellular 47.69 47.99
CDX79122 Canola extracellular 40.34 47.88
CDY63769 Canola extracellular 48.11 47.81
CDY11284 Canola extracellular, golgi 51.05 47.65
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 46.85 47.55
CDX74293 Canola endoplasmic reticulum, extracellular 46.85 47.35
CDX91953 Canola endoplasmic reticulum, extracellular 46.85 47.35
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 51.26 47.2
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 45.38 47.16
CDY17432 Canola extracellular 45.38 47.06
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 44.96 46.72
CDY04133 Canola extracellular 44.96 46.62
CDY58428 Canola endoplasmic reticulum, golgi, plastid 50.42 46.6
CDY13312 Canola plasma membrane 52.31 46.46
CDY45202 Canola extracellular 44.54 46.19
CDY41382 Canola endoplasmic reticulum, golgi 51.05 46.11
CDY45254 Canola endoplasmic reticulum 44.33 46.07
CDY03043 Canola extracellular 44.33 45.97
CDY39314 Canola extracellular 44.12 45.75
CDX69550 Canola endoplasmic reticulum, extracellular 47.9 45.69
CDY66593 Canola endoplasmic reticulum, extracellular 47.69 45.49
CDY09356 Canola extracellular 43.28 45.08
CDY41679 Canola endoplasmic reticulum, plasma membrane 43.28 45.08
CDY53552 Canola extracellular 44.96 43.23
CDX81636 Canola endoplasmic reticulum 43.91 43.18
CDX81635 Canola mitochondrion, nucleus 0.42 1.32
CDX96858 Canola mitochondrion, nucleus 0.42 1.32
CDY04136 Canola mitochondrion, nucleus 0.42 1.32
CDY09355 Canola mitochondrion, nucleus 0.42 1.32
CDY41678 Canola mitochondrion, nucleus 0.42 1.32
CDY45199 Canola mitochondrion, nucleus 0.42 1.32
CDY45253 Canola mitochondrion, nucleus 0.42 1.32
CDY53553 Canola mitochondrion, nucleus 0.42 1.32
CDY66531 Canola mitochondrion, nucleus 0.42 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078G257UniProt:A0A078G257InterPro:AmbAllergen
EnsemblPlants:CDY18738ProteinID:CDY18738ProteinID:CDY18738.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00005842001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF63InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EE5DE4SEG:seg
Description
BnaC08g08780DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078G257]
Coordinates
chrLK032088:-:133646..136767
Molecular Weight (calculated)
52683.8 Da
IEP (calculated)
9.149
GRAVY (calculated)
-0.302
Length
476 amino acids
Sequence
(BLAST)
001: MASPSQKLTS VCLAVIVLLA LTATIFRKLE IPSSRSLSLS LLMYESSLTF RNNCSVFFFR KLKTEELRSS KNNSTMAAKR VKGVELNEQH AVSDPDRVAD
101: EVASLVQMSE HNKTARRKLG FFSCGTGNPI DDCWRCDPNW HKNRKRLADC GIGFGRNAIG GRDGRFYIVT DPTDDDAINP KPGTLRHAVI QEEPLWIVFK
201: RDMVIELKQE LIMNSFKTID GRGSNVHIAN GACITIQFIT NVIIHGLHIH DCKPTGNAMV RSSPSHFGWR TMADGDAVSI FGSSHIWIDH NSLSHCADGL
301: VDAVMGSTAI TVSNNHFTHH NEVMLLGHSD SYTKDKLMQV TIAYNHFGKG LVQRMPRCRH GYFHVVNNDY THWEMYAIGG SAEPTINSQG NRYAAPMDRF
401: AKEVTKRVGT DASDWKKWNW RSEGDLLLNG AFFRASGAGT SASYGRASSL AAKPSSMVHT ITSTAGALGC RKGRPC
Best Arabidopsis Sequence Match ( AT4G13710.1 )
(BLAST)
001: MASSSQKLIS VCVAVLVVLA LTAMIFRNSE ISLSRKLKTE VIQSSNSSTM AAIRKLKTEE FQSLNSSTMA ATRLDGEPQQ QQHAVADDPD MVADEVAKLV
101: QMSEQNRTAR RKLGFFSCGT GNPIDDCWRC DRNWHKNRKR LADCGIGFGR NAIGGRDGRF YIVTDPTDED VVNPKPGTLR HAVIQEEPLW IVFKRDMVIE
201: LKQELIMNSF KTIDARGSNV HIANGACITI QFITNVIIHG LHIHDCKPTG NAMVRSSPSH FGWRTMADGD AVSIFGSSHI WIDHNSLSHC ADGLVDAVMG
301: STAITVSNNH FTHHNEVMLL GHSDSYTKDK LMQVTIAYNH FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSAEPTI NSQGNRYAAP MDRFAKEVTK
401: RVETDASEWK KWNWRSEGDL LLNGAFFRPS GAGASASYGR ASSLAAKPSS MVDTITSTAG ALGCRKGRPC
Arabidopsis Description
Probable pectate lyase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q944R1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.