Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56220 | Canola | endoplasmic reticulum, extracellular, vacuole | 98.03 | 98.03 |
| CDY18330 | Canola | cytosol | 34.24 | 95.21 |
| CDY56520 | Canola | extracellular | 93.6 | 93.37 |
| CDY12666 | Canola | extracellular | 93.35 | 93.35 |
| CDY32557 | Canola | extracellular | 93.1 | 93.1 |
| CDY28857 | Canola | extracellular | 93.1 | 92.87 |
| AT1G67750.1 | Thale cress | endoplasmic reticulum, vacuole | 91.13 | 90.69 |
| CDY70583 | Canola | cytosol | 51.48 | 86.01 |
| KRH31375 | Soybean | nucleus | 79.31 | 80.1 |
| KRG97506 | Soybean | endoplasmic reticulum, golgi | 78.82 | 79.01 |
| CDY08948 | Canola | endoplasmic reticulum, extracellular | 78.08 | 78.08 |
| CDY24847 | Canola | endoplasmic reticulum, extracellular | 77.83 | 77.83 |
| CDY34310 | Canola | endoplasmic reticulum, vacuole | 77.34 | 77.34 |
| CDY03419 | Canola | endoplasmic reticulum, extracellular | 77.34 | 77.34 |
| CDY11033 | Canola | endoplasmic reticulum, extracellular | 76.85 | 76.85 |
| CDX92652 | Canola | endoplasmic reticulum, extracellular | 76.85 | 76.85 |
| CDY41506 | Canola | endoplasmic reticulum, extracellular, vacuole | 76.11 | 74.82 |
| CDY48132 | Canola | endoplasmic reticulum, golgi | 76.11 | 72.2 |
| CDY16732 | Canola | endoplasmic reticulum, golgi | 76.11 | 72.2 |
| CDX83690 | Canola | endoplasmic reticulum, extracellular, vacuole | 72.17 | 71.12 |
| CDY00156 | Canola | extracellular, plastid | 71.67 | 70.63 |
| CDY20049 | Canola | plastid, vacuole | 71.43 | 70.39 |
| CDY03964 | Canola | extracellular | 71.43 | 70.39 |
| CDY34149 | Canola | extracellular | 60.84 | 68.8 |
| CDY24654 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.95 | 68.27 |
| CDY05305 | Canola | endoplasmic reticulum, extracellular, vacuole | 69.95 | 68.27 |
| CDY65626 | Canola | golgi | 75.86 | 67.84 |
| CDY05655 | Canola | extracellular | 68.72 | 66.91 |
| CDY33938 | Canola | extracellular | 68.47 | 66.67 |
| CDY19932 | Canola | extracellular | 68.23 | 66.27 |
| CDY56668 | Canola | extracellular | 67.98 | 66.03 |
| CDY46471 | Canola | endoplasmic reticulum, extracellular | 69.7 | 64.46 |
| CDY01119 | Canola | endoplasmic reticulum, extracellular | 67.98 | 63.45 |
| CDY47327 | Canola | endoplasmic reticulum, extracellular | 67.49 | 63.28 |
| CDY15517 | Canola | endoplasmic reticulum, extracellular, golgi | 66.75 | 62.88 |
| CDX86615 | Canola | endoplasmic reticulum, extracellular, golgi | 66.75 | 62.88 |
| CDX89799 | Canola | extracellular | 66.26 | 62.41 |
| CDY61137 | Canola | extracellular | 66.01 | 62.18 |
| CDY01151 | Canola | endoplasmic reticulum, extracellular, vacuole | 67.98 | 61.06 |
| CDY53564 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.23 | 60.88 |
| CDY18738 | Canola | endoplasmic reticulum, extracellular | 68.72 | 58.61 |
| CDY66697 | Canola | endoplasmic reticulum, golgi | 64.04 | 58.17 |
| CDX77400 | Canola | endoplasmic reticulum, extracellular | 69.21 | 57.11 |
| CDX77470 | Canola | golgi, plasma membrane | 64.53 | 57.08 |
| CDX98092 | Canola | extracellular | 49.26 | 56.18 |
| CDX98091 | Canola | extracellular | 51.23 | 56.06 |
| CDY30040 | Canola | extracellular | 49.01 | 55.9 |
| CDY30041 | Canola | extracellular | 50.49 | 55.26 |
| CDX82902 | Canola | endoplasmic reticulum, extracellular, vacuole | 44.34 | 55.05 |
| CDY06557 | Canola | extracellular | 52.46 | 55.04 |
| CDY20748 | Canola | extracellular | 52.22 | 54.64 |
| CDX70244 | Canola | vacuole | 56.16 | 51.7 |
| CDX79122 | Canola | extracellular | 50.49 | 51.12 |
| CDY27438 | Canola | extracellular | 50.99 | 50.74 |
| CDX76388 | Canola | extracellular | 50.49 | 50.25 |
| CDX78152 | Canola | extracellular | 58.13 | 49.58 |
| CDX73573 | Canola | extracellular | 57.88 | 49.37 |
| CDX67560 | Canola | plasma membrane | 58.62 | 48.57 |
| CDX67615 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.62 | 48.47 |
| CDY07515 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.62 | 48.37 |
| CDY56964 | Canola | endoplasmic reticulum, extracellular, vacuole | 57.39 | 47.36 |
| CDY68729 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.22 | 46.29 |
| CDX96854 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.22 | 46.29 |
| CDY11284 | Canola | extracellular, golgi | 58.13 | 46.27 |
| CDY04133 | Canola | extracellular | 51.97 | 45.97 |
| CDY17432 | Canola | extracellular | 51.72 | 45.75 |
| CDX91953 | Canola | endoplasmic reticulum, extracellular | 52.71 | 45.44 |
| CDX74293 | Canola | endoplasmic reticulum, extracellular | 52.71 | 45.44 |
| CDY28691 | Canola | endoplasmic reticulum, extracellular, vacuole | 52.46 | 45.42 |
| CDX70590 | Canola | endoplasmic reticulum, extracellular | 52.71 | 45.05 |
| CDY58428 | Canola | endoplasmic reticulum, golgi, plastid | 57.14 | 45.05 |
| CDY03043 | Canola | extracellular | 50.74 | 44.88 |
| CDX73426 | Canola | endoplasmic reticulum, extracellular, vacuole | 57.14 | 44.87 |
| CDX78607 | Canola | endoplasmic reticulum, extracellular | 52.46 | 44.84 |
| CDX85564 | Canola | extracellular | 52.22 | 44.82 |
| CDY41382 | Canola | endoplasmic reticulum, golgi | 58.13 | 44.78 |
| CDY45254 | Canola | endoplasmic reticulum | 50.49 | 44.76 |
| CDY63769 | Canola | extracellular | 52.71 | 44.68 |
| CDY45202 | Canola | extracellular | 50.25 | 44.44 |
| CDY39314 | Canola | extracellular | 50.25 | 44.44 |
| CDY41679 | Canola | endoplasmic reticulum, plasma membrane | 50.0 | 44.42 |
| CDY09356 | Canola | extracellular | 49.51 | 43.98 |
| CDY13312 | Canola | plasma membrane | 57.14 | 43.28 |
| CDX81636 | Canola | endoplasmic reticulum | 51.48 | 43.18 |
| CDX69550 | Canola | endoplasmic reticulum, extracellular | 52.71 | 42.89 |
| CDY66593 | Canola | endoplasmic reticulum, extracellular | 52.71 | 42.89 |
| CDY53552 | Canola | extracellular | 51.97 | 42.63 |
| CDY70492 | Canola | endoplasmic reticulum, extracellular | 0.99 | 7.27 |
| CDX96858 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY09355 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY66531 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY41678 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDX81635 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY04136 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY53553 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY45199 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
| CDY45253 | Canola | mitochondrion, nucleus | 0.74 | 1.97 |
Protein Annotations
| KEGG:00040+4.2.2.2 | Gene3D:2.160.20.10 | MapMan:21.3.5.2 | GO:A0A078EL10 | InterPro:AmbAllergen | EnsemblPlants:CDY01846 |
| ProteinID:CDY01846 | ProteinID:CDY01846.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0030570 |
| GO:GO:0045490 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00113020001 | InterPro:IPR012334 | PFAM:PF00544 | PRINTS:PR00807 |
| PANTHER:PTHR31683 | PANTHER:PTHR31683:SF28 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence | SMART:SM00656 |
| SUPFAM:SSF51126 | SignalP:SignalP-noTM | UniPathway:UPA00545 | UniParc:UPI0004EE987F | SEG:seg | : |
Description
BnaC06g28860D
Coordinates
chrLK031929:+:829538..831362
Molecular Weight (calculated)
44621.9 Da
IEP (calculated)
8.423
GRAVY (calculated)
-0.265
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLLHLSLSL FSCLFLVLAP TYVASSHVSD PELVVQEVNQ QINASRRNLG VLSCGTGNPI DDCWRCDPKW ENNRQRLADC AIGFGKRAIG GRDGKIYVVT
101: DPSDKDAVNP KPGTLRHAVI QEEPLWIIFA RDMVIKLKEE LIMNSFKTID GRGANAHIAG GACITVQYVT NIIIHGISIH DCKKRGNAYV RDSPSHYGWR
201: TASDGDAVSI FGGSHVWVDH CSLSNCEDGL VDVIHGSTAI TISNNYLTHH DKVMLLGHSD SYTRDKNMQV TIAFNHFGEG LVQRMPRCRH GYFHVVNNDY
301: THWGMYAIGG SAAPTINSQG NRFLAPNNKV FKEVTKYEDA PQSKWKNWNW RSEGDLFLNG AFFTPSGGRA SSMYAKASSL SARPSSLVAS VTGNAGALSC
401: KKGSRC
101: DPSDKDAVNP KPGTLRHAVI QEEPLWIIFA RDMVIKLKEE LIMNSFKTID GRGANAHIAG GACITVQYVT NIIIHGISIH DCKKRGNAYV RDSPSHYGWR
201: TASDGDAVSI FGGSHVWVDH CSLSNCEDGL VDVIHGSTAI TISNNYLTHH DKVMLLGHSD SYTRDKNMQV TIAFNHFGEG LVQRMPRCRH GYFHVVNNDY
301: THWGMYAIGG SAAPTINSQG NRFLAPNNKV FKEVTKYEDA PQSKWKNWNW RSEGDLFLNG AFFTPSGGRA SSMYAKASSL SARPSSLVAS VTGNAGALSC
401: KKGSRC
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.