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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:
  • plastid 3
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plastid
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11284 Canola extracellular, golgi 96.89 97.84
AT5G04310.1 Thale cress plasma membrane 88.74 88.22
CDX70244 Canola vacuole 75.34 87.98
CDY41382 Canola endoplasmic reticulum, golgi 88.54 86.53
HORVU5Hr1G005000.2 Barley cytosol 42.72 64.52
CDY18330 Canola cytosol 18.25 64.38
VIT_13s0019g04910.t01 Wine grape extracellular 61.36 63.71
Solyc11g008140.1.1 Tomato plasma membrane 55.53 63.7
KRG90767 Soybean extracellular 60.78 62.35
PGSC0003DMT400079776 Potato plasma membrane 58.45 61.43
KRH35994 Soybean extracellular 60.0 61.31
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 57.86 60.57
PGSC0003DMT400011046 Potato mitochondrion 33.98 60.14
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 57.28 60.08
CDX92652 Canola endoplasmic reticulum, extracellular 46.41 58.87
CDY11033 Canola endoplasmic reticulum, extracellular 46.41 58.87
CDY34310 Canola endoplasmic reticulum, vacuole 46.41 58.87
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 56.12 58.74
CDY08948 Canola endoplasmic reticulum, extracellular 46.21 58.62
CDY24847 Canola endoplasmic reticulum, extracellular 46.21 58.62
CDY03419 Canola endoplasmic reticulum, extracellular 46.02 58.37
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 56.89 58.13
Solyc05g055510.2.1 Tomato plasma membrane 55.53 57.89
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.44 57.64
CDY28857 Canola extracellular 45.44 57.49
CDY56520 Canola extracellular 45.24 57.25
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 45.05 57.14
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 45.44 56.66
CDY12666 Canola extracellular 44.66 56.65
CDY32557 Canola extracellular 44.66 56.65
CDY56668 Canola extracellular 45.83 56.46
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 56.5 56.29
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 45.44 56.25
CDY19932 Canola extracellular 45.63 56.22
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 45.24 56.01
CDY70583 Canola cytosol 26.41 55.97
CDY05655 Canola extracellular 44.85 55.4
CDY33938 Canola extracellular 44.85 55.4
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 44.27 55.34
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 45.63 54.52
CDX78152 Canola extracellular 50.29 54.41
CDY16732 Canola endoplasmic reticulum, golgi 45.05 54.21
CDY48132 Canola endoplasmic reticulum, golgi 45.05 54.21
CDX73573 Canola extracellular 50.1 54.2
CDY00156 Canola extracellular, plastid 43.3 54.13
CDY03964 Canola extracellular 43.3 54.13
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 45.24 54.06
CDY20049 Canola plastid, vacuole 43.11 53.88
CDX89799 Canola extracellular 45.05 53.83
CDY61137 Canola extracellular 44.85 53.6
CDY01119 Canola endoplasmic reticulum, extracellular 45.24 53.56
CDY47327 Canola endoplasmic reticulum, extracellular 44.66 53.12
CDX67560 Canola plasma membrane 50.49 53.06
CDY34149 Canola extracellular 36.89 52.92
CDY46471 Canola endoplasmic reticulum, extracellular 44.85 52.62
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.2 52.29
CDY65626 Canola golgi 45.83 51.98
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 45.44 51.77
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 45.44 51.43
CDY66697 Canola endoplasmic reticulum, golgi 44.47 51.23
CDY06557 Canola extracellular 38.06 50.65
CDY20748 Canola extracellular 38.06 50.52
CDY18738 Canola endoplasmic reticulum, extracellular 46.6 50.42
CDX77470 Canola golgi, plasma membrane 44.85 50.33
CDX98092 Canola extracellular 34.76 50.28
CDY30040 Canola extracellular 34.76 50.28
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 55.34 49.91
CDX98091 Canola extracellular 35.92 49.87
CDY30041 Canola extracellular 35.34 49.06
CDX79122 Canola extracellular 37.48 48.13
CDY13312 Canola plasma membrane 49.51 47.57
CDX77400 Canola endoplasmic reticulum, extracellular 45.24 47.36
CDY27438 Canola extracellular 37.48 47.3
CDX76388 Canola extracellular 37.28 47.06
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 37.86 42.58
CDY39314 Canola extracellular 37.86 42.48
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 37.48 42.14
CDY45254 Canola endoplasmic reticulum 37.48 42.14
CDY17432 Canola extracellular 37.48 42.05
CDY04133 Canola extracellular 37.28 41.83
CDY45202 Canola extracellular 37.09 41.61
CDY03043 Canola extracellular 36.5 40.96
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 37.09 40.72
CDY63769 Canola extracellular 37.48 40.29
CDY09356 Canola extracellular 35.73 40.26
CDY41679 Canola endoplasmic reticulum, plasma membrane 35.73 40.26
CDX70590 Canola endoplasmic reticulum, extracellular 37.09 40.21
CDX78607 Canola endoplasmic reticulum, extracellular 37.09 40.21
CDX85564 Canola extracellular 36.89 40.17
CDX74293 Canola endoplasmic reticulum, extracellular 36.7 40.13
CDX91953 Canola endoplasmic reticulum, extracellular 36.7 40.13
CDX81636 Canola endoplasmic reticulum 37.67 40.08
CDY53552 Canola extracellular 38.25 39.8
CDX69550 Canola endoplasmic reticulum, extracellular 37.48 38.68
CDY66593 Canola endoplasmic reticulum, extracellular 37.48 38.68
CDY70492 Canola endoplasmic reticulum, extracellular 0.78 7.27
CDX81635 Canola mitochondrion, nucleus 1.94 6.58
CDX96858 Canola mitochondrion, nucleus 1.94 6.58
CDY45253 Canola mitochondrion, nucleus 1.94 6.58
CDY53553 Canola mitochondrion, nucleus 1.94 6.58
CDY66531 Canola mitochondrion, nucleus 1.94 6.58
CDY04136 Canola mitochondrion, nucleus 1.75 5.92
CDY09355 Canola mitochondrion, nucleus 1.75 5.92
CDY41678 Canola mitochondrion, nucleus 1.75 5.92
CDY45199 Canola mitochondrion, nucleus 1.75 5.92
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078J061UniProt:A0A078J061InterPro:AmbAllergen
EnsemblPlants:CDY58428ProteinID:CDY58428ProteinID:CDY58428.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00023607001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF11InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EEC37ASEG:seg
Description
BnaC03g71150DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078J061]
Coordinates
chrLK033668:-:940..6180
Molecular Weight (calculated)
55773.6 Da
IEP (calculated)
7.250
GRAVY (calculated)
-0.237
Length
515 amino acids
Sequence
(BLAST)
001: MVAHKGVHNH QKPTCICIIW FCLLVSLPHH GRASSSFNLS LPHQHPFPEH VVLNVQRKLN DSLSRRNLLT YQQDDATTAS SAPIPSCLTG NPIDDCWRCD
101: PNWSQNRQRL ADCSIGFGQG TLGGKGGRFY LVTDSSDDDA ANPLPGTLRH AVNHGLPEPL WIIFSGDMGI TLRHELIVGS FKTIDGRGTN VQITGHGCLT
201: IQQVSHVIVH NVHIHHCKPS GNTLVASSPT HVGFRGVSDG DGISVSASHH IWVDHCSLGY CSDGLIDVIL ASTAVTVSNN YFHHHDEVML LGHDDRYTAD
301: SGMQVTIAFN HFGEGLVQRM PRCRHGYIHV VNNDFTAWEM YAIGGSANPT INSQGNRYTA PIDPNAKEVT KRVDSNEKHW GKWNWRTEGD VMVNGAFFVP
401: SGDGVSPAFA RATSLQAKTA DVIDQLTVNA GVFGDPSGRN GQGGAFPGIT GGGGTVTRGY SKGGPGGGSS DSDDGIFTMI FGSNSSAAAV ALRPRQVWSI
501: VFTIILLWYF PHHRR
Best Arabidopsis Sequence Match ( AT5G04310.2 )
(BLAST)
001: MVAHERRIHN LQKPTCICII WFCLLVSLSH HGRASSTSAS IFNLSLPHQH PFPEHVVLNV QRKLNDSLSR RQLLTYQQDD GTTASSPIPS CITGNPIDDC
101: WRCDPNWSAN RQRLADCSIG FGQGTLGGKG GQFYLVTDSS DNDAANPIPG TLRHAVIQPE PLWIIFSSDM GIKLKHELII GSYKTIDGRG TNIQITGHGC
201: LTIQQVSHVI IHNVHIHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCADGLIDV ILASTAVTIS NNYFSHHDEV MLLGHDDRYT
301: ADKGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAS PTINSQGNRY TAPIDPNAKE VTKRVDSNEK HWSGWNWRTE GDVMVNGAFF
401: VPSGDGVSPA YARATSVQPK AAAIIDQLTV NAGVFGDPSG RNGQGGSFPG ITNGGGTITR GYSKSGPAGG GSGSDSDDGL FTLIFGNNSG AVALRPGQVW
501: SILLIIILYW YIPHHTRS
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F4JW80]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.