Factsheet for HORVU5Hr1G005000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011046	Potato	mitochondrion	49.85	58.42
Solyc11g008140.1.1	Tomato	plasma membrane	68.04	51.67
HORVU2Hr1G002930.1	Barley	cytosol	41.06	51.09
KRG90767	Soybean	extracellular	73.31	49.8
VIT_13s0019g04910.t01	Wine grape	extracellular	71.85	49.4
CDX70244	Canola	vacuole	63.34	48.98
KRH35994	Soybean	extracellular	71.85	48.61
PGSC0003DMT400079776	Potato	plasma membrane	68.04	47.35
Solyc05g055510.2.1	Tomato	plasma membrane	65.4	45.14
Solyc03g071570.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	66.57	45.04
CDX67615	Canola	endoplasmic reticulum, extracellular, vacuole	64.52	44.81
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	64.52	44.81
CDY07515	Canola	endoplasmic reticulum, extracellular, vacuole	64.52	44.72
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	64.22	44.69
CDY11284	Canola	extracellular, golgi	65.1	43.53
CDY56964	Canola	endoplasmic reticulum, extracellular, vacuole	62.76	43.5
HORVU1Hr1G038220.7	Barley	endoplasmic reticulum, extracellular	61.88	43.33
AT5G04310.1	Thale cress	plasma membrane	65.69	43.24
AT3G54920.1	Thale cress	extracellular	63.05	42.91
Bra005799.1-P	Field mustard	extracellular, golgi	64.22	42.77
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	65.69	42.75
CDY58428	Canola	endoplasmic reticulum, golgi, plastid	64.52	42.72
CDY41382	Canola	endoplasmic reticulum, golgi	65.98	42.69
CDX73426	Canola	endoplasmic reticulum, extracellular, vacuole	64.22	42.36
HORVU6Hr1G027330.1	Barley	extracellular	46.63	41.62
HORVU2Hr1G002880.2	Barley	mitochondrion	59.24	39.61
HORVU6Hr1G038630.1	Barley	extracellular	46.63	39.26
PGSC0003DMT400060374	Potato	extracellular, plasma membrane, vacuole	65.4	39.05
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	47.21	36.26
HORVU7Hr1G019500.1	Barley	mitochondrion	48.97	32.12

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A287Q8K6	InterPro:AmbAllergen	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872
EnsemblPlantsGene:HORVU5Hr1G005000	EnsemblPlants:HORVU5Hr1G005000.2	InterPro:IPR012334	PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683
PANTHER:PTHR31683:SF11	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126
UniParc:UPI000B47F60A	SEG:seg	:	:	:	:

Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A287Q8K6]

Coordinates

chrchr5H:+:8469857..8471253

Molecular Weight (calculated)

33944.0 Da

IEP (calculated)

6.817

GRAVY (calculated)

-0.340

Length

341 amino acids

Sequence
(BLAST)

001: IEECPQKLNK CXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXRRQML SPQAKDQASQ CLTGNPIDDC WVCDANWQNN RQRLADCGIG FGHNALGGKG
101: GQIYVVTDSS DGDPANPVPG TLRHAVIQDE PLWIVFSADM TIKLKHELIF NSYKTVDGRG ANVHITGNGC ITLQYVSNII LHNIHVHHCK PSGNTDIRAT
201: PTKVGWRGRS DGDGISIFGA RQIWIDHCSL SYCTDGLIDA IMASTAITIS NNYFAHHNEV MLLGHDDHYV LGSGMQVTIA FNHFGEALVQ RMPRCRRGYI
301: HVVNNDFTQW EMYAIGGSAN PTINSQGNRY TAPTDENAKE H

Best Arabidopsis Sequence Match ( AT3G53190.1 )
(BLAST)

001: MMLQRSCIVL FFSLFLLVPQ MVFSMLNRTL LLIPHPDPEL VAYQVQWKVN ASITRRQALD TTDQAGSTPC ITGNPIDDCW KCDPNWPNNR QGLADCGIGF
101: GQYALGGKGG QFYFVTDSSD DDAVNPKPGT LRYGVIQEEP LWIVFPSNMM IKLKQELIFN SYKTLDGRGA NVHIVGGGCI TLQYVSNIII HNIHIHHCYQ
201: SGNTNVRSSP THYGFRTKSD GDGISIFGSK DIWIDHCSLS RCKDGLIDAV MGSTGITISN NFFSHHNEVM LLGHSDHYEP DSGMQVTIAF NHFGEKLIQR
301: MPRCRRGYIH VVNNDFTQWE MYAIGGSGNP TINSQGNRYT APTNPFAKEV TKRVETPDGD WKGWNWRSEG DILVNGAFFV ASGEGAEMRY EKAYSVEPKS
401: ASFITQITFH SGVLGVGGRN NNLGMWTTTG SEGTSGLDSY NDYTDEMSGA GSTNRLSFSV LVFLLSSISY LVVFTSSTQM FML

Arabidopsis Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.