Factsheet for HORVU2Hr1G002930.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P00290_001	Banana	endoplasmic reticulum, extracellular, vacuole	87.23	58.15
TraesCS2D01G018000.1	Wheat	golgi	99.27	57.51
Zm00001d004448_P001	Maize	endoplasmic reticulum	93.8	57.37
TraesCS2B01G024500.2	Wheat	golgi	99.27	56.55
TraesCS2A01G016500.1	Wheat	golgi	99.27	56.55
Zm00001d025067_P001	Maize	mitochondrion	93.43	56.39
VIT_05s0051g00590.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	86.13	54.88
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	83.58	54.14
HORVU2Hr1G002880.2	Barley	mitochondrion	100.0	53.73
KXG25802	Sorghum	plastid	94.53	53.51
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	87.59	52.86
GSMUA_Achr7P04580_001	Banana	endoplasmic reticulum, extracellular	86.13	52.8
CDY15517	Canola	endoplasmic reticulum, extracellular, golgi	82.12	52.2
CDX86615	Canola	endoplasmic reticulum, extracellular, golgi	82.12	52.2
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	82.12	52.2
KRG90246	Soybean	nucleus	85.04	52.01
KRH33474	Soybean	nucleus	85.4	52.0
CDY61137	Canola	extracellular	81.75	51.97
Bra032494.1-P	Field mustard	extracellular	81.75	51.97
CDX89799	Canola	extracellular	81.39	51.74
AT1G04680.1	Thale cress	extracellular	81.39	51.74
Bra015341.1-P	Field mustard	extracellular	81.39	51.74
PGSC0003DMT400076251	Potato	extracellular	83.58	51.12
CDY53564	Canola	endoplasmic reticulum, extracellular, vacuole	84.31	50.77
CDY01151	Canola	endoplasmic reticulum, extracellular, vacuole	83.58	50.66
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	83.21	50.55
Solyc09g091430.2.1	Tomato	nucleus	82.85	50.33
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	85.04	49.57
CDY18738	Canola	endoplasmic reticulum, extracellular	83.94	48.32
Bra015000.1-P	Field mustard	golgi, plasma membrane	75.18	46.09
CDY66697	Canola	endoplasmic reticulum, golgi	74.82	45.86
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	74.09	44.91
CDX77470	Canola	golgi, plasma membrane	75.18	44.88
HORVU5Hr1G005000.2	Barley	cytosol	51.09	41.06
HORVU1Hr1G038220.7	Barley	endoplasmic reticulum, extracellular	70.07	39.43
HORVU6Hr1G027330.1	Barley	extracellular	52.55	37.7
HORVU6Hr1G038630.1	Barley	extracellular	54.74	37.04
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	55.47	34.23
HORVU7Hr1G019500.1	Barley	mitochondrion	59.49	31.35

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A287GX02	InterPro:AmbAllergen	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872	EnsemblPlantsGene:HORVU2Hr1G002930
EnsemblPlants:HORVU2Hr1G002930.1	InterPro:IPR012334	PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF34
InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126	UniParc:UPI000B483AD1
SEG:seg	:	:	:	:	:

Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A287GX02]

Coordinates

chrchr2H:+:6418717..6420681

Molecular Weight (calculated)

29665.0 Da

IEP (calculated)

7.648

GRAVY (calculated)

-0.128

Length

274 amino acids

Sequence
(BLAST)

001: MVITLSQELI MNSFKTIDGR GANVHIANGA CITIQYVTNV IIHGLHIHDC RPTGNAMVRS SPSHYGWRTI ADGDAVSIFG ASHVWVDHCS LSNCADGLID
101: AIMGSTAITV SNNYFTHHNE VMLLGHSDSY LKDKAMQVTI AFNHFGEGLI QRMPRCRHGY FHVVNNDYTH WEMYAIGGSA EPTINSQGNR YLAPTNPFAK
201: EVTKRVETAQ TTWKAWNWRS EGDMLLNGAF FTPSGAGASA SYSRASSLGA KSSSMVATIT SGAGALSCHK GSSC

Best Arabidopsis Sequence Match ( AT1G04680.1 )
(BLAST)

001: MAVLPTWLLA MMCLLFFVGA MENTTHDNIS SLPRSDETEW NQHAVTNPDE VADEVLALTE MSVRNHTERR KLGYFTCGTG NPIDDCWRCD PNWHKNRKRL
101: ADCGIGFGRN AIGGRDGRFY VVTDPRDDNP VNPRPGTLRH AVIQDRPLWI VFKRDMVIQL KQELIVNSFK TIDGRGANVH IANGGCITIQ FVTNVIVHGL
201: HIHDCKPTGN AMVRSSETHF GWRTMADGDA ISIFGSSHVW IDHNSLSHCA DGLVDAVMGS TAITISNNHL THHNEVMLLG HSDSYMRDKA MQVTIAYNHF
301: GVGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSANPTIN SQGNRYAAPK NPFAKEVTKR VDTPASHWKG WNWRSEGDLL QNGAYFTSSG AAASGSYARA
401: SSLSAKSSSL VGHITSDAGA LPCRRGRQCS S

Arabidopsis Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178W464]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.