Factsheet for HORVU7Hr1G019500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	79.23	91.96
TraesCS4A01G385700.1	Wheat	cytosol	37.88	89.95
Zm00001d000216_P001	Maize	golgi, vacuole	65.58	77.85
Os06t0144200-01	Rice	extracellular, plasma membrane	67.31	77.78
OQU75805	Sorghum	mitochondrion	63.46	74.66
GSMUA_Achr10P...	Banana	cytosol	40.0	60.12
HORVU2Hr1G002930.1	Barley	cytosol	31.35	59.49
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	49.81	59.27
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	49.81	59.13
GSMUA_Achr10P...	Banana	extracellular	43.85	58.46
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	49.23	58.31
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	49.62	58.24
VIT_17s0000g05740.t01	Wine grape	extracellular	47.88	58.04
PGSC0003DMT400083135	Potato	extracellular	47.31	56.55
Solyc06g071020.2.1	Tomato	extracellular	47.31	56.55
PGSC0003DMT400046723	Potato	endoplasmic reticulum, golgi, vacuole	47.31	56.55
Solyc03g113150.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	47.31	56.55
HORVU6Hr1G038630.1	Barley	extracellular	44.04	56.54
KRH63402	Soybean	extracellular	47.12	56.32
KRH45851	Soybean	extracellular	48.65	56.1
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	47.12	55.18
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	46.54	54.63
KRH74782	Soybean	extracellular	46.92	54.46
KRH54508	Soybean	extracellular	34.81	54.35
PGSC0003DMT400003310	Potato	extracellular	46.15	53.81
KRH69345	Soybean	extracellular	46.15	53.69
Solyc02g087670.2.1	Tomato	extracellular	45.96	53.59
PGSC0003DMT400002241	Potato	extracellular	45.19	53.53
Solyc01g010740.2.1	Tomato	endoplasmic reticulum, extracellular	45.19	53.53
PGSC0003DMT400014086	Potato	extracellular	45.96	53.47
KRH01130	Soybean	extracellular	45.19	53.41
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	45.38	53.27
Solyc03g058890.2.1	Tomato	extracellular	45.58	52.78
CDX70590	Canola	endoplasmic reticulum, extracellular	48.08	52.63
CDY68729	Canola	endoplasmic reticulum, extracellular, plasma membrane	46.15	52.4
KRG93502	Soybean	extracellular	44.62	52.37
PGSC0003DMT400014085	Potato	extracellular, golgi	40.0	52.26
CDX96854	Canola	endoplasmic reticulum, extracellular, plasma membrane	45.96	52.18
Bra026221.1-P	Field mustard	endoplasmic reticulum	45.96	52.18
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	45.96	52.18
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	39.81	52.14
CDY04133	Canola	extracellular	45.96	52.07
Bra017412.1-P	Field mustard	extracellular	45.96	52.07
CDX78607	Canola	endoplasmic reticulum, extracellular	47.5	52.0
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	47.5	52.0
CDY17432	Canola	extracellular	45.77	51.85
PGSC0003DMT400017863	Potato	extracellular	44.04	51.81
Bra026832.1-P	Field mustard	extracellular	45.0	51.77
Solyc03g058910.2.1	Tomato	extracellular, golgi	39.62	51.76
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	46.92	51.69
AT1G14420.1	Thale cress	endoplasmic reticulum	45.58	51.63
CDY39314	Canola	extracellular	45.58	51.63
CDX85564	Canola	extracellular	46.92	51.59
CDY63769	Canola	extracellular	47.31	51.36
Bra023504.1-P	Field mustard	extracellular	47.12	50.94
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	44.42	50.55
CDX91953	Canola	endoplasmic reticulum, extracellular	45.58	50.32
CDX74293	Canola	endoplasmic reticulum, extracellular	45.58	50.32
CDY66593	Canola	endoplasmic reticulum, extracellular	48.27	50.3
AT2G02720.1	Thale cress	extracellular, vacuole	43.85	50.11
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	48.08	50.1
CDX69550	Canola	endoplasmic reticulum, extracellular	48.08	50.1
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	45.19	49.89
CDY28691	Canola	endoplasmic reticulum, extracellular, vacuole	45.0	49.89
CDY45202	Canola	extracellular	44.04	49.89
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	45.38	49.68
Bra024811.1-P	Field mustard	extracellular	43.85	49.67
CDY03043	Canola	extracellular	43.46	49.24
Solyc05g007080.2.1	Tomato	extracellular	43.08	49.12
HORVU5Hr1G005000.2	Barley	cytosol	32.12	48.97
PGSC0003DMT400045436	Potato	extracellular	42.69	48.37
HORVU6Hr1G027330.1	Barley	extracellular	35.19	47.91
CDX81636	Canola	endoplasmic reticulum	43.85	47.11
CDY53552	Canola	extracellular	44.81	47.07
HORVU1Hr1G038220.7	Barley	endoplasmic reticulum, extracellular	42.12	44.97
HORVU2Hr1G002880.2	Barley	mitochondrion	43.85	44.71
GSMUA_Achr7P08840_001	Banana	nucleus	51.15	39.7
Solyc02g067450.2.1	Tomato	extracellular	42.69	36.04
CDY04136	Canola	mitochondrion, nucleus	0.38	1.32

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A287VLE5	InterPro:AmbAllergen	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872	EnsemblPlantsGene:HORVU7Hr1G019500
EnsemblPlants:HORVU7Hr1G019500.1	InterPro:IPR012334	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807	PANTHER:PTHR31683
PANTHER:PTHR31683:SF60	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656
SUPFAM:SSF51126	UniParc:UPI000B4758C0	SEG:seg	:	:	:

Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A287VLE5]

Coordinates

chrchr7H:-:26035560..26037267

Molecular Weight (calculated)

57894.6 Da

IEP (calculated)

9.743

GRAVY (calculated)

-0.428

Length

520 amino acids

Sequence
(BLAST)

001: RFTAILGPRA LHRHEQGSRA HTALDIYTCT YSDGTATAIV GAVRRHRGRW SQRNLISPET LPAVRQAPAS RTMAAGSVMA RSHLHILLYV LATVVVTAAA
101: EAPVEKTPLP AYNLTADEEY WAKRAEEARE YSRDAYVSDP VALLNRFNRD VHRATERRSL ARRYGGPCVA TNPIDRCWRC RADWASDRQR LATCARGFGH
201: NAAGGAGGRT YVVTDPSDDE LIVPKKGTLR FGVIQDRPLW IVFARSMVIR LSQELIVNSN KTIDGRGAQV HITGAQITLQ GVKHVIIHNV HIHHSAPHSG
301: GMIRDSKHHY GRRTRSDGDG VSILSSSNVW IDHVSMSSCA DGLIDVVSGS TAITVSNSHF TNHDHVMLFG ASNAQEQQDR MMQVTVAFNH FGKGLVQRMP
401: RCRFGFFHVV NNDYTHWKMY AIGGNRDPTI ISQGNRFIAP DDPNAKEVTK REYTPYNEYK DWVWKSQGDV MMNGAFFNQS GGQNERTYGN MDFIPAKHGK
501: YVGQLTQFAG TLDCRVGKPC

Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)

001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC

Arabidopsis Description

Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.