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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • mitochondrion 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:mitochondrion, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 79.68 79.68
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 67.72 68.34
VIT_17s0000g05740.t01 Wine grape extracellular 63.21 65.27
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 62.75 63.62
GSMUA_Achr10P... Banana cytosol 48.53 62.14
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 61.4 62.1
GSMUA_Achr10P... Banana extracellular 53.5 60.77
TraesCS4A01G385700.1 Wheat cytosol 29.57 59.82
KRH45851 Soybean extracellular 59.59 58.54
KRG93502 Soybean extracellular 58.47 58.47
KRH01130 Soybean extracellular 58.01 58.41
PGSC0003DMT400003310 Potato extracellular 58.69 58.3
Solyc02g087670.2.1 Tomato extracellular 58.47 58.07
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 57.79 57.79
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 52.37 57.57
KRH74782 Soybean extracellular 58.01 57.37
HORVU6Hr1G038630.1 Barley extracellular 52.37 57.28
KRH69345 Soybean extracellular 57.34 56.82
VIT_17s0000g09810.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.47 56.58
VIT_01s0137g00240.t01 Wine grape extracellular 51.24 56.33
PGSC0003DMT400014086 Potato extracellular 56.66 56.15
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 54.4 56.05
TraesCS7D01G356700.1 Wheat extracellular 55.98 55.86
EES06507 Sorghum golgi, vacuole 55.98 55.73
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 55.76 55.63
Solyc03g058890.2.1 Tomato extracellular 56.21 55.46
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 55.53 55.41
Os06t0583900-01 Rice plasma membrane 55.98 55.36
Os02t0214400-01 Rice plasma membrane 55.08 54.71
Zm00001d000216_P001 Maize golgi, vacuole 53.95 54.57
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 54.63 54.5
PGSC0003DMT400017863 Potato extracellular 54.18 54.3
CDY63769 Canola extracellular 58.69 54.28
CDX85564 Canola extracellular 57.79 54.12
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 51.92 54.12
OQU75805 Sorghum mitochondrion 53.95 54.07
AT1G14420.1 Thale cress endoplasmic reticulum 55.98 54.03
Os06t0144200-01 Rice extracellular, plasma membrane 54.85 54.0
EER88571 Sorghum endoplasmic reticulum, plasma membrane 55.3 53.96
TraesCS6D01G170500.1 Wheat golgi 51.69 53.88
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 52.6 53.81
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 54.4 53.79
VIT_07s0005g05520.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 53.95 53.71
CDX70590 Canola endoplasmic reticulum, extracellular 57.56 53.68
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 57.56 53.68
AT2G02720.1 Thale cress extracellular, vacuole 55.08 53.63
Bra017412.1-P Field mustard extracellular 55.53 53.59
CDY04133 Canola extracellular 55.53 53.59
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 55.3 53.49
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 57.34 53.47
CDX78607 Canola endoplasmic reticulum, extracellular 57.34 53.47
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 56.88 53.39
Bra023504.1-P Field mustard extracellular 57.79 53.22
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 54.85 53.17
CDY17432 Canola extracellular 55.08 53.16
Bra026832.1-P Field mustard extracellular 54.18 53.1
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 54.85 53.06
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 54.85 53.06
CDY66593 Canola endoplasmic reticulum, extracellular 59.59 52.91
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 59.37 52.71
CDX69550 Canola endoplasmic reticulum, extracellular 59.37 52.71
Solyc03g058910.2.1 Tomato extracellular, golgi 47.18 52.51
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 55.53 52.45
CDX74293 Canola endoplasmic reticulum, extracellular 55.76 52.44
CDX91953 Canola endoplasmic reticulum, extracellular 55.76 52.44
PGSC0003DMT400014085 Potato extracellular, golgi 46.95 52.26
Bra024811.1-P Field mustard extracellular 53.95 52.07
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 54.63 52.04
Bra026221.1-P Field mustard endoplasmic reticulum 53.72 51.97
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 53.05 51.88
CDY45202 Canola extracellular 53.72 51.85
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 55.08 51.8
CDY39314 Canola extracellular 53.5 51.63
CDY03043 Canola extracellular 53.5 51.63
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 46.05 51.39
Os06t0144900-01 Rice mitochondrion 53.72 50.32
VIT_10s0116g01160.t01 Wine grape endoplasmic reticulum, extracellular 42.66 49.61
CDX81636 Canola endoplasmic reticulum 54.18 49.59
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 51.69 49.46
Zm00001d036945_P001 Maize endoplasmic reticulum 46.5 49.05
CDY53552 Canola extracellular 54.63 48.89
VIT_19s0015g00510.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 44.24 48.76
VIT_13s0019g04900.t01 Wine grape extracellular 45.37 48.32
HORVU7Hr1G019500.1 Barley mitochondrion 54.63 46.54
VIT_08s0007g04820.t01 Wine grape plastid 47.63 43.15
VIT_13s0019g04910.t01 Wine grape extracellular 48.31 43.15
GSMUA_Achr7P08840_001 Banana nucleus 58.47 38.66
Solyc02g067450.2.1 Tomato extracellular 47.86 34.42
CDY04136 Canola mitochondrion, nucleus 0.45 1.32
Protein Annotations
KEGG:00040+4.2.2.2EntrezGene:100257069wikigene:100257069Gene3D:2.160.20.10MapMan:21.3.5.2EMBL:AM452108
InterPro:AmbAllergenProteinID:CAN69904ProteinID:CAN69904.1ProteinID:CBI32014ProteinID:CBI32014.3UniProt:D7TNE1
EMBL:FN596002GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490
GO:GO:0046872InterPro:IPR012334EntrezGene:LOC100257069wikigene:LOC100257069PFAM:PF00544PFAM:PF04431
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001982AE9
ArrayExpress:VIT_01s0026g01680EnsemblPlantsGene:VIT_01s0026g01680EnsemblPlants:VIT_01s0026g01680.t01unigene:Vvi.20484RefSeq:XP_002270112RefSeq:XP_002270112.1
SEG:seg:::::
Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE1]
Coordinates
chr1:+:10846297..10848232
Molecular Weight (calculated)
49933.1 Da
IEP (calculated)
10.157
GRAVY (calculated)
-0.352
Length
443 amino acids
Sequence
(BLAST)
001: MAAPKSNSLL LLFVVMFMVV VPTIRAHIAE YDDYWKAREK EAKTVAIDAF DPSPEDVNDD FNKNVEKSIF GKNGTRRNLK VNKGPCKATN PIDRCWRCRR
101: NWAMDRRRLA DCVLGFGRRT VGGKHGRLYI VTDPSDNDML NPKPGTLRYA VIQPQPLWIV FGRSMIIKLK QELMVTSDKT IDGRGVNVHI AYGAGITIQF
201: ARNVIIHGLH IHDIVSRPGG LIRDSVHHFG LRTRSDGDGI SIFGSSHVWI DHNSMSKCED GLVDAIQGST AITISNNHFT KHNETMLLGA SDGYSGDIIM
301: QVTVAFNHFG RGLIQRMPRC RWGFFHVVNN DYTHWNMYAV GGSAHPTIVS QGNRYVAAPL MDPKHDAKEV TKRDHATKAE WSKWTWRSEG DLMVNGAFFV
401: QSGVPFKKKP FSRYDMIKAK PGKFVPRLTR YSGALTCWRT SPC
Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)
001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.