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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024811.1-P Field mustard extracellular 99.35 99.35
CDY03043 Canola extracellular 96.95 96.95
CDY04133 Canola extracellular 85.84 85.84
CDY17432 Canola extracellular 85.84 85.84
AT2G02720.1 Thale cress extracellular, vacuole 83.22 83.96
CDY09356 Canola extracellular 81.26 81.62
CDY41679 Canola endoplasmic reticulum, plasma membrane 81.05 81.4
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 73.42 73.58
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 72.77 72.93
CDY39314 Canola extracellular 72.11 72.11
CDY45254 Canola endoplasmic reticulum 71.68 71.83
CDY53552 Canola extracellular 72.55 67.27
CDX81636 Canola endoplasmic reticulum 70.81 67.15
TraesCS4A01G385700.1 Wheat cytosol 27.89 58.45
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.77 58.31
KRH45851 Soybean extracellular 56.43 57.43
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.9 56.88
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 54.25 56.85
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.81 56.52
KRH74782 Soybean extracellular 54.47 55.8
KRH69345 Soybean extracellular 54.25 55.7
Solyc03g058890.2.1 Tomato extracellular 54.47 55.68
GSMUA_Achr10P... Banana extracellular 47.28 55.64
PGSC0003DMT400017863 Potato extracellular 53.16 55.2
Solyc02g087670.2.1 Tomato extracellular 53.59 55.16
PGSC0003DMT400014086 Potato extracellular 53.59 55.03
PGSC0003DMT400003310 Potato extracellular 53.38 54.93
GSMUA_Achr10P... Banana cytosol 41.39 54.91
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 51.85 53.72
CDY18330 Canola cytosol 16.99 53.42
Zm00001d000216_P001 Maize golgi, vacuole 50.98 53.42
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.75 52.9
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.16 52.03
Os06t0144200-01 Rice extracellular, plasma membrane 50.98 52.0
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 49.02 51.96
CDX70590 Canola endoplasmic reticulum, extracellular 53.59 51.79
CDY70583 Canola cytosol 27.23 51.44
OQU75805 Sorghum mitochondrion 49.46 51.36
CDY12666 Canola extracellular 45.32 51.23
CDY32557 Canola extracellular 45.32 51.23
CDX78607 Canola endoplasmic reticulum, extracellular 52.94 51.16
HORVU6Hr1G038630.1 Barley extracellular 45.1 51.11
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.1 50.99
CDY00156 Canola extracellular, plastid 45.75 50.97
CDX74293 Canola endoplasmic reticulum, extracellular 52.07 50.74
CDX91953 Canola endoplasmic reticulum, extracellular 52.07 50.74
Os06t0583900-01 Rice plasma membrane 49.46 50.67
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 49.46 50.67
CDX85564 Canola extracellular 52.07 50.53
CDY63769 Canola extracellular 52.72 50.52
CDY03419 Canola endoplasmic reticulum, extracellular 44.66 50.49
CDY34310 Canola endoplasmic reticulum, vacuole 44.66 50.49
CDY20049 Canola plastid, vacuole 45.32 50.49
CDY28857 Canola extracellular 44.66 50.37
CDY56520 Canola extracellular 44.66 50.37
EES06507 Sorghum golgi, vacuole 48.8 50.34
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.44 50.25
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.1 50.24
EER88571 Sorghum endoplasmic reticulum, plasma membrane 49.67 50.22
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 47.06 50.12
CDY08948 Canola endoplasmic reticulum, extracellular 44.23 50.0
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 45.1 49.76
CDY03964 Canola extracellular 44.66 49.76
CDY24847 Canola endoplasmic reticulum, extracellular 44.01 49.75
Os06t0144900-01 Rice mitochondrion 51.2 49.68
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 46.62 49.65
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.88 49.52
CDX92652 Canola endoplasmic reticulum, extracellular 43.79 49.51
CDY01119 Canola endoplasmic reticulum, extracellular 46.84 49.43
CDY47327 Canola endoplasmic reticulum, extracellular 46.62 49.42
CDX89799 Canola extracellular 46.41 49.42
CDY11033 Canola endoplasmic reticulum, extracellular 43.57 49.26
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 48.58 49.23
CDY61137 Canola extracellular 46.19 49.19
CDY05655 Canola extracellular 44.66 49.16
CDY33938 Canola extracellular 44.66 49.16
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.23 49.15
CDY56668 Canola extracellular 44.66 49.04
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.67 49.03
TraesCS7D01G356700.1 Wheat extracellular 47.28 48.87
CDY19932 Canola extracellular 44.44 48.8
Os02t0214400-01 Rice plasma membrane 47.28 48.65
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.06 48.65
CDY66593 Canola endoplasmic reticulum, extracellular 52.72 48.5
PGSC0003DMT400014085 Potato extracellular, golgi 42.05 48.49
CDX69550 Canola endoplasmic reticulum, extracellular 52.51 48.3
Solyc03g058910.2.1 Tomato extracellular, golgi 41.83 48.24
TraesCS6D01G170500.1 Wheat golgi 44.66 48.24
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 46.62 48.2
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 46.62 48.2
CDY34149 Canola extracellular 37.69 48.19
CDY16732 Canola endoplasmic reticulum, golgi 44.88 48.13
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 44.44 48.0
CDY48132 Canola endoplasmic reticulum, golgi 44.66 47.9
CDY46471 Canola endoplasmic reticulum, extracellular 45.75 47.84
CDX98092 Canola extracellular 37.04 47.75
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.77 47.4
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.62 47.35
CDY30040 Canola extracellular 36.6 47.19
CDX98091 Canola extracellular 38.13 47.17
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.62 47.03
CDY20748 Canola extracellular 39.43 46.65
CDY30041 Canola extracellular 37.69 46.63
CDY06557 Canola extracellular 39.22 46.51
Zm00001d036945_P001 Maize endoplasmic reticulum 42.27 46.19
CDY66697 Canola endoplasmic reticulum, golgi 44.88 46.09
CDY65626 Canola golgi 44.44 44.93
CDX79122 Canola extracellular 39.22 44.89
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 45.1 44.71
CDY27438 Canola extracellular 39.65 44.61
CDY18738 Canola endoplasmic reticulum, extracellular 46.19 44.54
CDX76388 Canola extracellular 39.43 44.36
CDX77470 Canola golgi, plasma membrane 44.23 44.23
HORVU7Hr1G019500.1 Barley mitochondrion 49.89 44.04
CDX77400 Canola endoplasmic reticulum, extracellular 45.97 42.89
CDX70244 Canola vacuole 40.96 42.63
CDX73573 Canola extracellular 43.57 42.02
CDX78152 Canola extracellular 43.57 42.02
CDX67560 Canola plasma membrane 44.01 41.22
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 43.36 40.45
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 43.14 40.24
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 42.92 40.12
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 42.7 37.91
CDY11284 Canola extracellular, golgi 41.83 37.65
CDY13312 Canola plasma membrane 43.79 37.5
GSMUA_Achr7P08840_001 Banana nucleus 54.68 37.46
Solyc02g067450.2.1 Tomato extracellular 50.11 37.34
CDY58428 Canola endoplasmic reticulum, golgi, plastid 41.61 37.09
CDY41382 Canola endoplasmic reticulum, golgi 42.05 36.62
CDY70492 Canola endoplasmic reticulum, extracellular 0.87 7.27
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078I565UniProt:A0A078I565InterPro:AmbAllergen
EnsemblPlants:CDY45202ProteinID:CDY45202ProteinID:CDY45202.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00081631001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545
UniParc:UPI0004EF4910SEG:seg::::
Description
BnaA06g34060DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078I565]
Coordinates
chrLK032617:-:194496..196777
Molecular Weight (calculated)
51659.7 Da
IEP (calculated)
10.300
GRAVY (calculated)
-0.521
Length
459 amino acids
Sequence
(BLAST)
001: MASAHLNLGS YVFAFVSLSL AVVAPSVQGH VAVYDEYWTQ RQTDALRETI KSYDPNPFNV TDHFNYHAAL AMETTGADNG TRRELRQVRR GRKTRRRGGR
101: HHSLNAIDKC WRGDKNWHKN RKKLADCVLG FGRKTTGGKK GQFYVVTDAS DHDLINPKPG TLRHAVTRDR PLWIIFGRSM IIKLQQELII THDKTIDGRG
201: ANVHIMGGAG LTLQFVKNVI IHNIHIKHIK CGAGGMIRDC EHHVGQRSKS DGDGINIFGA TNIWIDHVSM THCSDGMIDA IMGSTAITIS NSHLTDHNEV
301: LLFGGKDGDV IDKKMQITVA FNHFGKRLVQ RMPRVRYGLV HVVNNDYTHW EMYAIGGNKN PTIISQGNRF IAPHQENCKQ VTKREYTPYT EWKSWNWQSE
401: RDYFLNGAYF VNSGRANAWS PAPKNPIHRK FAIRPQSGTG VRRLTKDAGT LGCTPGKSC
Best Arabidopsis Sequence Match ( AT2G02720.1 )
(BLAST)
001: MVNLGSYVFV FVALSLTVVV PSVQAHIAEY DEYWTQRQTN ALRETLESYD PNPENVTDHF NYHAALAMET TGIVNETRRD LRQVGRGKKT TRRGGRFESL
101: NAIDKCWRGD KNWDKNRKKL ADCVLGFGRK TTGGKNGPIY VVTDPSDNDL LKPKPGTIRH AVTRDRPLWI IFARSMIIKL QQELIITNDK TIDGRGAKIY
201: ITGGAGLTLQ FVRNVIIHNI HIKQIKRGAG GLIIDSEQHF GLRTVSDGDG INIFGATNVW IDHVSMTDCS DGMIDAIMGS TAITISNSHF TDHDEVMLFG
301: GTNKDVIDKK MQITVAFNHF GKRLKQRMPR VRFGLVHVVN NDYTHWEMYA IGGNMNPTII SQGNRFIAPP IEDSKQVTKR EYTPYPEWKS WNWQSEKDYF
401: LNGAYFVQSG KANAWSATPK NPIPRKFAIR PQPGTKVRRL TKDAGTLGCK PGKSC
Arabidopsis Description
Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.