Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007116.1-P Field mustard endoplasmic reticulum, extracellular 95.33 95.71
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 96.75 92.07
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 85.98 85.98
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 85.57 85.74
AT3G54920.1 Thale cress extracellular 86.38 84.83
CDY18330 Canola cytosol 19.51 65.75
Solyc11g008140.1.1 Tomato plasma membrane 58.94 64.59
PGSC0003DMT400079776 Potato plasma membrane 63.01 63.27
HORVU5Hr1G005000.2 Barley cytosol 43.5 62.76
VIT_13s0019g04910.t01 Wine grape extracellular 62.2 61.69
CDX70244 Canola vacuole 54.47 60.77
KRG90767 Soybean extracellular 60.98 59.76
PGSC0003DMT400011046 Potato mitochondrion 34.55 58.42
KRH35994 Soybean extracellular 59.55 58.13
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 47.97 58.13
CDY56520 Canola extracellular 47.97 57.99
CDY11284 Canola extracellular, golgi 59.96 57.84
CDY28857 Canola extracellular 47.76 57.74
CDY11033 Canola endoplasmic reticulum, extracellular 47.56 57.64
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 58.94 57.54
CDY19932 Canola extracellular 48.78 57.42
CDY56668 Canola extracellular 48.78 57.42
CDX92652 Canola endoplasmic reticulum, extracellular 47.36 57.39
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 47.36 57.39
CDY34310 Canola endoplasmic reticulum, vacuole 47.36 57.39
CDX73573 Canola extracellular 55.28 57.14
CDY03419 Canola endoplasmic reticulum, extracellular 47.15 57.14
CDY24847 Canola endoplasmic reticulum, extracellular 47.15 57.14
CDY32557 Canola extracellular 47.15 57.14
CDY08948 Canola endoplasmic reticulum, extracellular 46.95 56.9
CDY12666 Canola extracellular 46.95 56.9
CDY70583 Canola cytosol 28.05 56.79
CDY05655 Canola extracellular 47.97 56.59
CDY33938 Canola extracellular 47.97 56.59
CDX78152 Canola extracellular 54.67 56.51
Solyc05g055510.2.1 Tomato plasma membrane 56.71 56.48
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 47.36 56.42
CDY58428 Canola endoplasmic reticulum, golgi, plastid 58.74 56.12
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.95 55.53
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 46.95 55.53
CDX89799 Canola extracellular 48.58 55.45
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 46.34 55.34
CDY41382 Canola endoplasmic reticulum, golgi 58.94 55.03
CDY61137 Canola extracellular 47.97 54.76
CDX67560 Canola plasma membrane 54.27 54.49
CDY48132 Canola endoplasmic reticulum, golgi 47.36 54.44
CDY16732 Canola endoplasmic reticulum, golgi 47.15 54.21
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 47.36 54.06
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 47.36 54.06
CDY01119 Canola endoplasmic reticulum, extracellular 47.56 53.79
CDY00156 Canola extracellular, plastid 44.92 53.64
CDY47327 Canola endoplasmic reticulum, extracellular 47.15 53.58
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 49.19 53.54
CDY20049 Canola plastid, vacuole 44.72 53.4
CDY03964 Canola extracellular 44.51 53.16
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 48.98 52.97
CDY46471 Canola endoplasmic reticulum, extracellular 46.95 52.62
CDX98091 Canola extracellular 38.62 51.21
CDY65626 Canola golgi 47.15 51.1
CDY18738 Canola endoplasmic reticulum, extracellular 49.39 51.05
CDY34149 Canola extracellular 36.99 50.7
CDY30041 Canola extracellular 38.21 50.67
CDX98092 Canola extracellular 36.59 50.56
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.54 50.46
CDY13312 Canola plasma membrane 54.88 50.37
CDY30040 Canola extracellular 36.38 50.28
CDY06557 Canola extracellular 39.02 49.61
CDY20748 Canola extracellular 39.02 49.48
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 57.32 49.39
CDY66697 Canola endoplasmic reticulum, golgi 43.29 47.65
CDX77400 Canola endoplasmic reticulum, extracellular 47.15 47.15
CDX79122 Canola extracellular 38.21 46.88
CDX77470 Canola golgi, plasma membrane 43.7 46.84
CDY27438 Canola extracellular 38.21 46.08
CDX76388 Canola extracellular 38.01 45.83
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 41.87 44.98
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 41.87 44.98
CDY04133 Canola extracellular 41.26 44.23
CDY17432 Canola extracellular 41.26 44.23
CDY45254 Canola endoplasmic reticulum 40.65 43.67
CDY03043 Canola extracellular 40.45 43.36
CDY39314 Canola extracellular 40.45 43.36
CDY45202 Canola extracellular 40.45 43.36
CDY09356 Canola extracellular 39.84 42.89
CDY41679 Canola endoplasmic reticulum, plasma membrane 39.84 42.89
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 40.85 42.86
CDX74293 Canola endoplasmic reticulum, extracellular 40.65 42.46
CDX91953 Canola endoplasmic reticulum, extracellular 40.65 42.46
CDX78607 Canola endoplasmic reticulum, extracellular 40.85 42.32
CDX70590 Canola endoplasmic reticulum, extracellular 40.65 42.11
CDX81636 Canola endoplasmic reticulum 40.85 41.53
CDX85564 Canola extracellular 39.84 41.44
CDY63769 Canola extracellular 40.04 41.13
CDY53552 Canola extracellular 41.06 40.81
CDX69550 Canola endoplasmic reticulum, extracellular 40.65 40.08
CDY66593 Canola endoplasmic reticulum, extracellular 40.65 40.08
CDY70492 Canola endoplasmic reticulum, extracellular 1.22 10.91
CDX81635 Canola mitochondrion, nucleus 2.24 7.24
CDX96858 Canola mitochondrion, nucleus 2.24 7.24
CDY04136 Canola mitochondrion, nucleus 2.24 7.24
CDY09355 Canola mitochondrion, nucleus 2.24 7.24
CDY41678 Canola mitochondrion, nucleus 2.24 7.24
CDY45199 Canola mitochondrion, nucleus 2.24 7.24
CDY45253 Canola mitochondrion, nucleus 2.24 7.24
CDY53553 Canola mitochondrion, nucleus 2.24 7.24
CDY66531 Canola mitochondrion, nucleus 2.24 7.24
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078J3Q3UniProt:A0A078J3Q3InterPro:AmbAllergen
EnsemblPlants:CDY56964ProteinID:CDY56964ProteinID:CDY56964.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00020360001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF11InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EF3012
SEG:seg:::::
Description
BnaA09g55050DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078J3Q3]
Coordinates
chrLK033535:-:47193..51070
Molecular Weight (calculated)
52633.7 Da
IEP (calculated)
7.068
GRAVY (calculated)
-0.240
Length
492 amino acids
Sequence
(BLAST)
001: MLLPHFSTTI FLLCLFFFTL LQATNLTLPH QHPSPDSVAL HVLSSINASL SRRQLSSSSS STCRTGNPID DCWRCTSSDW SSNRQRLADC SIGFGRGTLG
101: GKNGKIYVVT DSSDNNPSNP TPGTLRYAVI QEEPLWIVFS SNMLIRLRHE LIINSYKTID GRGSAVHITG NGCLTVQYVQ HVIIHNVHIY DCKPSGGASG
201: RRGRSDGDGI SIFGAQKIWI DHCSMSHCTD GLIDAVMGST AITISNNYFA HHDEVMLLGH DDSYGPDTGM QVTIAFNHFG QGLVQRMPRC RRGYIHVVNN
301: DFTSWKMYAI GGSGNPTINS QGNRYIAPSD PSAKEVTKRV DSKDDGEWSN WNWRTEGDLM ENGAFFVASG GGVSALYSKA SSVEPKASAL VDQLTRNAGV
401: FGGPSRDDQG QSGDSYSGYG GGGGGGGSSG SGSDGGTSAI GGTTRGSSTS SSDDSNFFGM IFGSNAPPRP RLTLLFCLIM ISVMSLSTLL SL
Best Arabidopsis Sequence Match ( AT3G54920.1 )
(BLAST)
001: MLLQNFSNTI FLLCLFFTLL SATKPLNLTL PHQHPSPDSV ALHVIRSVNE SLARRQLSSP SSSSSSSSSS SSSSCRTGNP IDDCWRCSDA DWSTNRQRLA
101: DCSIGFGHGT LGGKNGKIYV VTDSSDNNPT NPTPGTLRYG VIQEEPLWIV FSSNMLIRLK QELIINSYKT LDGRGSAVHI TGNGCLTLQY VQHIIIHNLH
201: IYDCKPSAGF EKRGRSDGDG ISIFGSQKIW VDHCSMSHCT DGLIDAVMGS TAITISNNYF THHDEVMLLG HDDNYAPDTG MQVTIAFNHF GQGLVQRMPR
301: CRRGYIHVVN NDFTEWKMYA IGGSGNPTIN SQGNRYSAPS DPSAKEVTKR VDSKDDGEWS NWNWRTEGDL MENGAFFVAS GEGMSSMYSK ASSVDPKAAS
401: LVDQLTRNAG VFGGPRDDQG QSGNSYSPYG GDGGGGGSSG GSSGGGMDVM GGTTRGSSSS SGDDSNVFQM IFGSDAPSRP RLTLLFSLLM ISVLSLSTLL
501: L
Arabidopsis Description
PMR6Probable pectate lyase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z04]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.