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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033980.1-P Field mustard extracellular 99.75 99.75
CDY32557 Canola extracellular 99.75 99.75
CDY18330 Canola cytosol 34.73 96.58
CDY56520 Canola extracellular 94.33 94.1
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 94.09 94.09
AT1G67750.1 Thale cress endoplasmic reticulum, vacuole 94.09 93.63
CDY28857 Canola extracellular 93.6 93.37
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 93.35 93.35
CDY70583 Canola cytosol 52.46 87.65
KRH31375 Soybean nucleus 79.8 80.6
KRG97506 Soybean endoplasmic reticulum, golgi 79.56 79.75
CDY08948 Canola endoplasmic reticulum, extracellular 77.83 77.83
CDY03419 Canola endoplasmic reticulum, extracellular 77.59 77.59
CDY34310 Canola endoplasmic reticulum, vacuole 77.59 77.59
CDY24847 Canola endoplasmic reticulum, extracellular 77.59 77.59
CDY11033 Canola endoplasmic reticulum, extracellular 76.6 76.6
CDX92652 Canola endoplasmic reticulum, extracellular 76.6 76.6
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 76.6 75.3
CDY48132 Canola endoplasmic reticulum, golgi 77.09 73.13
CDY16732 Canola endoplasmic reticulum, golgi 76.6 72.66
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 70.94 69.9
CDY03964 Canola extracellular 70.44 69.42
CDY20049 Canola plastid, vacuole 70.44 69.42
CDY00156 Canola extracellular, plastid 70.2 69.17
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 70.44 68.75
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 70.44 68.75
CDY65626 Canola golgi 76.85 68.72
CDY34149 Canola extracellular 60.34 68.25
CDY19932 Canola extracellular 69.46 67.46
CDY33938 Canola extracellular 69.21 67.39
CDY05655 Canola extracellular 69.21 67.39
CDY56668 Canola extracellular 69.21 67.22
CDY46471 Canola endoplasmic reticulum, extracellular 70.44 65.15
CDY01119 Canola endoplasmic reticulum, extracellular 69.46 64.83
CDY47327 Canola endoplasmic reticulum, extracellular 68.97 64.67
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 67.73 63.81
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 67.73 63.81
CDX89799 Canola extracellular 67.49 63.57
CDY61137 Canola extracellular 67.24 63.34
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 68.97 61.95
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 69.21 61.76
CDY18738 Canola endoplasmic reticulum, extracellular 68.97 58.82
CDX77400 Canola endoplasmic reticulum, extracellular 70.44 58.13
CDY66697 Canola endoplasmic reticulum, golgi 63.55 57.72
CDX77470 Canola golgi, plasma membrane 64.04 56.64
CDY06557 Canola extracellular 53.94 56.59
CDY20748 Canola extracellular 53.69 56.19
CDX98091 Canola extracellular 50.99 55.8
CDX98092 Canola extracellular 48.28 55.06
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 44.34 55.05
CDY30041 Canola extracellular 50.25 54.99
CDY30040 Canola extracellular 48.03 54.78
CDX79122 Canola extracellular 50.0 50.62
CDX70244 Canola vacuole 54.93 50.57
CDY27438 Canola extracellular 50.74 50.49
CDX76388 Canola extracellular 50.49 50.25
CDX78152 Canola extracellular 58.62 50.0
CDX73573 Canola extracellular 58.37 49.79
CDX67560 Canola plasma membrane 58.37 48.37
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 58.37 48.17
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 58.13 48.07
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 56.9 46.95
CDX70590 Canola endoplasmic reticulum, extracellular 54.19 46.32
CDX78607 Canola endoplasmic reticulum, extracellular 54.19 46.32
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 52.22 46.29
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 52.22 46.29
CDY17432 Canola extracellular 51.97 45.97
CDY11284 Canola extracellular, golgi 57.64 45.88
CDX85564 Canola extracellular 53.2 45.67
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 52.71 45.63
CDY04133 Canola extracellular 51.48 45.53
CDY03043 Canola extracellular 51.48 45.53
CDY41679 Canola endoplasmic reticulum, plasma membrane 51.23 45.51
CDY63769 Canola extracellular 53.69 45.51
CDX74293 Canola endoplasmic reticulum, extracellular 52.71 45.44
CDX91953 Canola endoplasmic reticulum, extracellular 52.71 45.44
CDY45254 Canola endoplasmic reticulum 51.23 45.41
CDY45202 Canola extracellular 51.23 45.32
CDY39314 Canola extracellular 50.99 45.1
CDY09356 Canola extracellular 50.74 45.08
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.14 44.87
CDY58428 Canola endoplasmic reticulum, golgi, plastid 56.65 44.66
CDY41382 Canola endoplasmic reticulum, golgi 57.14 44.02
CDX69550 Canola endoplasmic reticulum, extracellular 53.69 43.69
CDY66593 Canola endoplasmic reticulum, extracellular 53.69 43.69
CDX81636 Canola endoplasmic reticulum 51.72 43.39
CDY13312 Canola plasma membrane 56.9 43.1
CDY53552 Canola extracellular 52.22 42.83
CDY70492 Canola endoplasmic reticulum, extracellular 0.74 5.45
CDY41678 Canola mitochondrion, nucleus 0.74 1.97
CDY45199 Canola mitochondrion, nucleus 0.74 1.97
CDY66531 Canola mitochondrion, nucleus 0.74 1.97
CDY45253 Canola mitochondrion, nucleus 0.74 1.97
CDX96858 Canola mitochondrion, nucleus 0.74 1.97
CDX81635 Canola mitochondrion, nucleus 0.74 1.97
CDY04136 Canola mitochondrion, nucleus 0.74 1.97
CDY53553 Canola mitochondrion, nucleus 0.74 1.97
CDY09355 Canola mitochondrion, nucleus 0.74 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078FHJ8UniProt:A0A078FHJ8InterPro:AmbAllergen
EnsemblPlants:CDY12666ProteinID:CDY12666ProteinID:CDY12666.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00070188001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF28InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EE632BSEG:seg
Description
BnaA02g13340DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FHJ8]
Coordinates
chrLK032025:+:620612..622722
Molecular Weight (calculated)
44705.1 Da
IEP (calculated)
8.650
GRAVY (calculated)
-0.271
Length
406 amino acids
Sequence
(BLAST)
001: MTLLHLSLSL FSCLLLVLGP TFIDSAHVSD PELVVQEVNQ KINASRRNLG VLSCGTGNPI DDCWRCDKKW EKNRQRLADC AIGFGKHAIG GRDGKIYVVT
101: DPSDKDVVNP KPGTLRHAVI QDEPLWIIFA RDMVIKLKEE LLMNSFKTID GRGANVHIAG GACITAQYVT NIIIHGINIH DCKKRGNAYV RDSPSHYGWR
201: TASDGDAISI FGGSHVWVDH CSLSNCADGL VDAIHGSTAI TISNNYLTHH NKVMLLGHSD SYTRDKNMQV TIAFNHFGEG LVQRMPRCRH GYFHVVNNDY
301: THWQMYAIGG SAAPTINSQG NRFLAPNDHV FKEVTKYEDA PQSKWKKWNW RSEGDLFLNG AFFTPAGGRA SSSYAKASSL SARPSSLVAS VTGNAGALYC
401: KKGSRC
Best Arabidopsis Sequence Match ( AT1G67750.1 )
(BLAST)
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.