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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029614.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 96.63 99.26
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 98.8 98.8
AT3G07010.1 Thale cress endoplasmic reticulum, extracellular, vacuole 96.39 96.39
CDY33938 Canola extracellular 88.46 88.25
CDY05655 Canola extracellular 87.98 87.77
CDY19932 Canola extracellular 87.98 87.56
CDY56668 Canola extracellular 87.26 86.84
CDY18330 Canola cytosol 27.16 77.4
CDY46471 Canola endoplasmic reticulum, extracellular 80.53 76.31
CDY61137 Canola extracellular 77.88 75.17
CDX89799 Canola extracellular 77.88 75.17
CDY47327 Canola endoplasmic reticulum, extracellular 78.12 75.06
CDY01119 Canola endoplasmic reticulum, extracellular 78.12 74.71
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 77.16 74.48
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 76.2 73.55
CDY70583 Canola cytosol 41.59 71.19
CDY08948 Canola endoplasmic reticulum, extracellular 68.99 70.69
CDY12666 Canola extracellular 68.75 70.44
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 68.75 70.44
CDY34310 Canola endoplasmic reticulum, vacuole 68.75 70.44
CDY24847 Canola endoplasmic reticulum, extracellular 68.51 70.2
CDY11033 Canola endoplasmic reticulum, extracellular 68.51 70.2
CDY32557 Canola extracellular 68.51 70.2
CDY03419 Canola endoplasmic reticulum, extracellular 68.27 69.95
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 68.27 69.95
CDX92652 Canola endoplasmic reticulum, extracellular 68.27 69.95
CDY56520 Canola extracellular 68.03 69.53
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 75.48 69.47
CDY28857 Canola extracellular 67.79 69.29
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 75.72 69.23
CDX77400 Canola endoplasmic reticulum, extracellular 80.29 67.89
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 67.07 67.55
CDY18738 Canola endoplasmic reticulum, extracellular 76.2 66.6
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 64.42 65.05
CDY03964 Canola extracellular 63.94 64.56
CDY16732 Canola endoplasmic reticulum, golgi 66.35 64.49
CDY48132 Canola endoplasmic reticulum, golgi 66.35 64.49
CDY66697 Canola endoplasmic reticulum, golgi 68.99 64.21
CDY00156 Canola extracellular, plastid 63.46 64.08
CDY20049 Canola plastid, vacuole 63.22 63.84
CDY34149 Canola extracellular 54.57 63.23
CDX77470 Canola golgi, plasma membrane 69.23 62.75
CDY65626 Canola golgi 66.59 61.01
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 42.79 54.43
CDY06557 Canola extracellular 50.48 54.26
CDY30040 Canola extracellular 46.39 54.21
CDY20748 Canola extracellular 50.48 54.12
CDX98092 Canola extracellular 46.15 53.93
CDX98091 Canola extracellular 47.84 53.64
CDY30041 Canola extracellular 47.6 53.37
CDX70244 Canola vacuole 54.57 51.47
CDX78152 Canola extracellular 58.41 51.05
CDX73573 Canola extracellular 58.17 50.84
CDX67560 Canola plasma membrane 59.13 50.2
CDX79122 Canola extracellular 48.32 50.12
CDY27438 Canola extracellular 47.84 48.77
CDX76388 Canola extracellular 47.36 48.28
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 56.25 47.66
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 56.25 47.56
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 55.53 46.95
CDX78607 Canola endoplasmic reticulum, extracellular 53.61 46.95
CDX70590 Canola endoplasmic reticulum, extracellular 53.61 46.95
CDX85564 Canola extracellular 53.12 46.72
CDY63769 Canola extracellular 53.61 46.56
CDX91953 Canola endoplasmic reticulum, extracellular 52.64 46.5
CDX74293 Canola endoplasmic reticulum, extracellular 52.64 46.5
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 52.4 46.48
CDY11284 Canola extracellular, golgi 56.25 45.88
CDY58428 Canola endoplasmic reticulum, golgi, plastid 56.01 45.24
CDY04133 Canola extracellular 49.76 45.1
CDY03043 Canola extracellular 49.76 45.1
CDY17432 Canola extracellular 49.76 45.1
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 49.52 44.98
CDY13312 Canola plasma membrane 57.93 44.96
CDY39314 Canola extracellular 49.52 44.88
CDY45202 Canola extracellular 49.52 44.88
CDX69550 Canola endoplasmic reticulum, extracellular 53.61 44.69
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 55.53 44.68
CDY45254 Canola endoplasmic reticulum 49.04 44.54
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 49.04 44.54
CDY66593 Canola endoplasmic reticulum, extracellular 53.37 44.49
CDY41382 Canola endoplasmic reticulum, golgi 56.25 44.4
CDY09356 Canola extracellular 48.32 43.98
CDY41679 Canola endoplasmic reticulum, plasma membrane 48.32 43.98
CDY53552 Canola extracellular 50.0 42.02
CDX81636 Canola endoplasmic reticulum 48.8 41.94
CDY70492 Canola endoplasmic reticulum, extracellular 1.92 14.55
CDX81635 Canola mitochondrion, nucleus 0.48 1.32
CDY66531 Canola mitochondrion, nucleus 0.48 1.32
CDY09355 Canola mitochondrion, nucleus 0.48 1.32
CDY04136 Canola mitochondrion, nucleus 0.48 1.32
CDY41678 Canola mitochondrion, nucleus 0.48 1.32
CDY45199 Canola mitochondrion, nucleus 0.48 1.32
CDY45253 Canola mitochondrion, nucleus 0.48 1.32
CDX96858 Canola mitochondrion, nucleus 0.48 1.32
CDY53553 Canola mitochondrion, nucleus 0.48 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078GH88UniProt:A0A078GH88InterPro:AmbAllergen
EnsemblPlants:CDY24654ProteinID:CDY24654ProteinID:CDY24654.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00027031001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF34InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EEC500SEG:seg
Description
BnaA05g30530DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078GH88]
Coordinates
chrLK032162:+:147319..151437
Molecular Weight (calculated)
46262.9 Da
IEP (calculated)
8.807
GRAVY (calculated)
-0.284
Length
416 amino acids
Sequence
(BLAST)
001: MAVTKLILFA SALLVTTLFI GVNSSRSNET WHEHAVEKPE EVAAMVDMSI RNSTERRRLG YFSCATGNPI DDCWRCDRKW QLRRKRLADC SIGFGRNAIG
101: GRDGRYYVVT DPNDDDPVTP VPGTLRHAVI QNEPLWIVFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT NIIVHGIHIH DCKPTGNAMV
201: RSSPSHYGWR SMADGDAISI FGSSHIWIDH NSLSNCADGL VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GQSKWKHWNW RSEGDLFLNG AFFTRSGAGA GAGYARASSL SAKSSSLVGT
401: MTSYSGALNC RAGRRC
Best Arabidopsis Sequence Match ( AT3G07010.1 )
(BLAST)
001: MAVTKLILFA SALLLTALFI GVNASRSNET WHEHAVENPD EVAAMVDMSI RNSTERRRLG YFSCATGNPI DDCWRCDRKW QLRRKRLADC SIGFGRNAIG
101: GRDGRFYVVT DPGDDDPVNP IPGTLRHAVI QDEPLWIIFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT NIIVHGIHVH DCKPTGNAMV
201: RSSPSHYGFR SMADGDAISI FGSSHIWIDH NSLSNCADGL VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GESKWKHWNW RSEGDLFLNG AFFTRSGAGA GANYARASSL SAKSSSLVGT
401: MTSYSGALNC RAGRRC
Arabidopsis Description
Probable pectate lyase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Z8]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.