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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013585.1-P Field mustard extracellular 96.26 98.22
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 78.8 96.64
AT4G22080.1 Thale cress extracellular 89.78 91.37
CDX76388 Canola extracellular 90.02 88.48
CDY27438 Canola extracellular 89.28 87.75
AT4G22090.1 Thale cress extracellular 85.79 87.31
CDX98091 Canola extracellular 61.85 66.85
CDY30041 Canola extracellular 61.6 66.58
CDY30040 Canola extracellular 56.86 64.04
CDX98092 Canola extracellular 56.86 64.04
PGSC0003DMT400042396 Potato endoplasmic reticulum, extracellular, vacuole 63.09 63.73
CDY70583 Canola cytosol 32.67 53.91
CDY18330 Canola cytosol 19.45 53.42
CDY08948 Canola endoplasmic reticulum, extracellular 51.87 51.23
CDY34310 Canola endoplasmic reticulum, vacuole 51.87 51.23
CDY24847 Canola endoplasmic reticulum, extracellular 51.62 50.99
CDY03419 Canola endoplasmic reticulum, extracellular 51.37 50.74
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 51.12 50.49
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 51.12 50.49
CDY11033 Canola endoplasmic reticulum, extracellular 50.62 50.0
CDY12666 Canola extracellular 50.62 50.0
CDY32557 Canola extracellular 50.62 50.0
CDX92652 Canola endoplasmic reticulum, extracellular 50.37 49.75
CDY28857 Canola extracellular 50.37 49.63
CDY56520 Canola extracellular 50.12 49.39
CDY33938 Canola extracellular 51.12 49.16
CDY05655 Canola extracellular 51.12 49.16
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 50.62 49.15
CDY56668 Canola extracellular 51.12 49.04
CDY19932 Canola extracellular 50.87 48.8
CDY00156 Canola extracellular, plastid 50.12 48.79
CDY03964 Canola extracellular 49.88 48.54
CDY20049 Canola plastid, vacuole 49.88 48.54
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 49.88 48.54
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 50.12 48.32
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 49.88 48.08
CDX89799 Canola extracellular 50.37 46.87
CDY61137 Canola extracellular 50.37 46.87
CDY20748 Canola extracellular 45.14 46.65
CDY06557 Canola extracellular 44.89 46.51
CDY48132 Canola endoplasmic reticulum, golgi 49.38 46.26
CDY16732 Canola endoplasmic reticulum, golgi 49.13 46.03
CDY47327 Canola endoplasmic reticulum, extracellular 49.38 45.73
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 49.13 45.71
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 48.88 45.48
CDY34149 Canola extracellular 40.65 45.4
CDY01119 Canola endoplasmic reticulum, extracellular 49.13 45.29
CDY65626 Canola golgi 50.62 44.71
CDY46471 Canola endoplasmic reticulum, extracellular 48.88 44.65
CDX70244 Canola vacuole 47.88 43.54
CDY66697 Canola endoplasmic reticulum, golgi 48.13 43.18
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 48.13 42.7
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 48.38 42.64
CDX77470 Canola golgi, plasma membrane 48.38 42.27
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 50.37 41.06
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 49.88 40.73
CDY18738 Canola endoplasmic reticulum, extracellular 47.88 40.34
CDY17432 Canola extracellular 46.13 40.3
CDY04133 Canola extracellular 46.13 40.3
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 46.88 40.09
CDX91953 Canola endoplasmic reticulum, extracellular 46.88 39.92
CDX74293 Canola endoplasmic reticulum, extracellular 46.88 39.92
CDX77400 Canola endoplasmic reticulum, extracellular 48.38 39.43
CDX73573 Canola extracellular 46.63 39.29
CDX78152 Canola extracellular 46.63 39.29
CDY45202 Canola extracellular 44.89 39.22
CDX85564 Canola extracellular 46.13 39.11
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 44.64 39.08
CDY39314 Canola extracellular 44.64 39.0
CDY09356 Canola extracellular 44.39 38.95
CDY41679 Canola endoplasmic reticulum, plasma membrane 44.39 38.95
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 44.14 38.65
CDY45254 Canola endoplasmic reticulum 44.14 38.65
CDY03043 Canola extracellular 44.14 38.56
CDX70590 Canola endoplasmic reticulum, extracellular 45.39 38.32
CDY11284 Canola extracellular, golgi 48.63 38.24
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 46.88 38.21
CDY63769 Canola extracellular 45.64 38.2
CDX67560 Canola plasma membrane 46.63 38.16
CDX78607 Canola endoplasmic reticulum, extracellular 45.14 38.11
CDY41382 Canola endoplasmic reticulum, golgi 49.63 37.76
CDY58428 Canola endoplasmic reticulum, golgi, plastid 48.13 37.48
CDX69550 Canola endoplasmic reticulum, extracellular 46.38 37.27
CDX81636 Canola endoplasmic reticulum 44.89 37.19
CDY66593 Canola endoplasmic reticulum, extracellular 46.13 37.07
CDY53552 Canola extracellular 45.64 36.97
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 47.13 36.56
CDY13312 Canola plasma membrane 45.89 34.33
CDY70492 Canola endoplasmic reticulum, extracellular 0.5 3.64
CDX96858 Canola mitochondrion, nucleus 0.25 0.66
CDY53553 Canola mitochondrion, nucleus 0.25 0.66
CDY45253 Canola mitochondrion, nucleus 0.25 0.66
CDX81635 Canola mitochondrion, nucleus 0.25 0.66
CDY66531 Canola mitochondrion, nucleus 0.25 0.66
CDY45199 Canola mitochondrion, nucleus 0.25 0.66
CDY41678 Canola mitochondrion, nucleus 0.25 0.66
CDY04136 Canola mitochondrion, nucleus 0.25 0.66
CDY09355 Canola mitochondrion, nucleus 0.25 0.66
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078CQY1InterPro:AmbAllergenEnsemblPlants:CDX79122
ProteinID:CDX79122ProteinID:CDX79122.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00131670001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF18InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EE76FB::
Description
BnaA01g11890D
Coordinates
chrLK031816:-:1913029..1917347
Molecular Weight (calculated)
44096.6 Da
IEP (calculated)
8.753
GRAVY (calculated)
-0.175
Length
401 amino acids
Sequence
(BLAST)
001: MTPFFILCLS VILFLCQSLV AAVNKGYYGY NSVASYLPEK PQNIMNPVDS CWRLKSDWTA NRKDLADCAV GFGSSALGGK KGSIYVVTNP NDNAANPQPG
101: SLRYGVIQDK PLWITFAKDM VLTLENELMV NSYKTIDGRG AKVEIAYGPC ITIQEVTNVI VHGISIHHCK PGKYGMVRSS TTHVGHRKGS DGDAIAISGS
201: SNIWIDHCYL ASCTDGLIDL PMLTSLDVIH ASTGITISNN YFTQHDKVML LGHNDDFVQD VKMKVTVAFN HFGPGLVERM PRVRRGYAHV ANNRYDKWIM
301: YAIGGSADPT IFSEGNYFIA SDNSNSKEVT KREVKGGWNN WRWRTSKDVF KNGAYFVPSG YGSVALPYSS AQRFPVAPGN LVPSLTAGAG PLNCYRNRPC
401: Y
Best Arabidopsis Sequence Match ( AT4G22080.1 )
(BLAST)
001: MTLFTVSCLL VVLFLCHSLV HAENNGYYGY TPTVANYLPE KPQNIMNPVD SCWRLKSDWA ANRKDLADCV VGFGSSTLGG KKGNLYVVTN PYDNAQNPQP
101: GSLRYGVIQA KPLWITFAKD MVITLENELM VNSYKTIDGR GAKVEIAYGP CITIQDVTNV IVHGISIHDC KPGKYGMVRS SPTHVGHRKG SDGDAIAIFG
201: SSNIWIDHCY LASCTDGLID VIHASTGITI SNNYFTQHDK VMLLGHNDDF VQDVKMKVTV AFNHFGPGLV ERMPRVRRGY AHVANNRYDK WIMYAIGGSA
301: DPTIFSEGNY FIASDKSNSK EVTKREVKGG WNNWRWRTSK DVFKNGAYFV PSGYGSISLP YSSAQRFTVA PGNLVPSLTA DAGPLNCNRN GPCY
Arabidopsis Description
RHS14Probable pectate lyase 16 [Source:UniProtKB/Swiss-Prot;Acc:O65456]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.