Factsheet for AT4G22090.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 6
golgi 5
extracellular 7
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G22080.1	Thale cress	extracellular	92.39	92.39
Bra013585.1-P	Field mustard	extracellular	87.82	88.04
CDX82902	Canola	endoplasmic reticulum, extracellular, vacuole	72.33	87.16
Bra020859.1-P	Field mustard	extracellular	87.31	87.09
CDX79122	Canola	extracellular	87.31	85.79
CDX76388	Canola	extracellular	87.56	84.56
CDY27438	Canola	extracellular	87.06	84.07
AT1G11920.1	Thale cress	endoplasmic reticulum, extracellular	68.27	70.05
PGSC0003DMT400042396	Potato	endoplasmic reticulum, extracellular, vacuole	64.97	64.48
AT1G30350.1	Thale cress	extracellular	57.11	61.14
AT4G24780.1	Thale cress	endoplasmic reticulum, extracellular	51.78	50.0
AT1G67750.1	Thale cress	endoplasmic reticulum, vacuole	51.52	49.75
AT3G07010.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	50.76	48.08
AT5G48900.1	Thale cress	extracellular	50.76	47.96
AT3G27400.2	Thale cress	endoplasmic reticulum, vacuole	50.0	47.36
AT5G63180.1	Thale cress	plastid	51.02	46.53
AT1G04680.1	Thale cress	extracellular	50.51	46.17
AT5G55720.1	Thale cress	endoplasmic reticulum, extracellular	45.18	45.41
AT4G13210.2	Thale cress	endoplasmic reticulum, extracellular	49.24	44.29
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	50.76	44.25
AT3G24670.1	Thale cress	endoplasmic reticulum, extracellular	48.98	43.86
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	48.98	41.06
AT2G02720.1	Thale cress	extracellular, vacuole	45.94	39.78
AT1G14420.1	Thale cress	endoplasmic reticulum	44.92	38.56
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	46.45	38.53
AT3G53190.1	Thale cress	extracellular	47.21	38.51
AT3G54920.1	Thale cress	extracellular	48.48	38.12
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	44.42	37.08
AT5G04310.1	Thale cress	plasma membrane	48.22	36.68

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	EntrezGene:828298	ProteinID:AEE84548.1	ArrayExpress:AT4G22090
EnsemblPlantsGene:AT4G22090	RefSeq:AT4G22090	TAIR:AT4G22090	RefSeq:AT4G22090-TAIR-G	EnsemblPlants:AT4G22090.1	TAIR:AT4G22090.1
InterPro:AmbAllergen	Unigene:At.54466	ProteinID:CAA18112.1	ProteinID:CAB79164.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872	InterPro:IPR012334	RefSeq:NP_193940.1
UniProt:O65457	PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF18	InterPro:Pec_lyase
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00000489B5
SEG:seg	:	:	:	:	:

Description

Putative pectate lyase 17 [Source:UniProtKB/Swiss-Prot;Acc:O65457]

Coordinates

chr4:-:11704003..11706042

Molecular Weight (calculated)

43301.3 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.225

Length

394 amino acids

Sequence
(BLAST)

001: MTHFTVSCLL VALFLCQSLV HAAYNGYYGY SPAAAPYPAE EPQNIMNPVD SCWRLKSDWD VNREDLADCA VGFGSSTLGG KKGNIYVVTN PYDNAQNPHP
101: GSLRYGVIQA KPLWITFAKD MVITLANELM VNSYKTIDGR GAKVEIAYGP CITIQDVTNV IVHGISIHDC KPGKSGKVRS SPTHVGHRKG SDGDAITIFG
201: SSNVWIDHCY LASCTDGLID VIHASTAITI SNNYFTQHDK VMLLGHNDNF VKDVKMKVTV AFNHFGPGLV ERMPRVRRGY AHVANNRYDK WIMYAIGGSA
301: DPTIFSEGNY FIASDKSYSK EVTKREVKGG WNNWRWRTSN DVFKNGAFFV PSGYGSIPLP YSSAQRFTVA PGNLVPSLTA DAGPLNCNRN GPCY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.