Factsheet for AT4G22080.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 8
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G22090.1	Thale cress	extracellular	92.39	92.39
Bra013585.1-P	Field mustard	extracellular	91.88	92.11
CDX82902	Canola	endoplasmic reticulum, extracellular, vacuole	75.63	91.13
Bra020859.1-P	Field mustard	extracellular	91.12	90.89
CDX79122	Canola	extracellular	91.37	89.78
CDX76388	Canola	extracellular	91.37	88.24
CDY27438	Canola	extracellular	90.36	87.25
AT1G11920.1	Thale cress	endoplasmic reticulum, extracellular	68.27	70.05
PGSC0003DMT400042396	Potato	endoplasmic reticulum, extracellular, vacuole	64.47	63.98
AT1G30350.1	Thale cress	extracellular	56.09	60.05
AT4G24780.1	Thale cress	endoplasmic reticulum, extracellular	51.27	49.51
AT1G67750.1	Thale cress	endoplasmic reticulum, vacuole	50.76	49.02
AT3G07010.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	50.76	48.08
AT5G48900.1	Thale cress	extracellular	50.76	47.96
AT3G27400.2	Thale cress	endoplasmic reticulum, vacuole	50.0	47.36
AT1G04680.1	Thale cress	extracellular	51.02	46.64
AT5G63180.1	Thale cress	plastid	50.76	46.3
AT5G55720.1	Thale cress	endoplasmic reticulum, extracellular	45.43	45.66
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	51.52	44.91
AT4G13210.2	Thale cress	endoplasmic reticulum, extracellular	49.75	44.75
AT3G24670.1	Thale cress	endoplasmic reticulum, extracellular	48.98	43.86
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	48.98	41.06
AT2G02720.1	Thale cress	extracellular, vacuole	45.94	39.78
AT1G14420.1	Thale cress	endoplasmic reticulum	45.69	39.22
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	47.21	39.16
AT3G53190.1	Thale cress	extracellular	47.46	38.72
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	46.19	38.56
AT3G54920.1	Thale cress	extracellular	47.72	37.52
AT5G04310.1	Thale cress	plasma membrane	48.73	37.07

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	EntrezGene:828297	UniProt:A0A178UZY8	ProteinID:AEE84547.1
ArrayExpress:AT4G22080	EnsemblPlantsGene:AT4G22080	RefSeq:AT4G22080	TAIR:AT4G22080	RefSeq:AT4G22080-TAIR-G	EnsemblPlants:AT4G22080.1
TAIR:AT4G22080.1	InterPro:AmbAllergen	Unigene:At.50361	EMBL:BX826855	ProteinID:CAA18111.1	ProteinID:CAB79163.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872
InterPro:IPR012334	RefSeq:NP_193939.1	UniProt:O65456	ProteinID:OAO98704.1	PFAM:PF00544	PO:PO:0000256
PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF18	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
Symbol:RHS14	SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00000489B4	:

Description

RHS14Probable pectate lyase 16 [Source:UniProtKB/Swiss-Prot;Acc:O65456]

Coordinates

chr4:-:11700555..11702785

Molecular Weight (calculated)

43478.7 Da

IEP (calculated)

8.509

GRAVY (calculated)

-0.222

Length

394 amino acids

Sequence
(BLAST)

001: MTLFTVSCLL VVLFLCHSLV HAENNGYYGY TPTVANYLPE KPQNIMNPVD SCWRLKSDWA ANRKDLADCV VGFGSSTLGG KKGNLYVVTN PYDNAQNPQP
101: GSLRYGVIQA KPLWITFAKD MVITLENELM VNSYKTIDGR GAKVEIAYGP CITIQDVTNV IVHGISIHDC KPGKYGMVRS SPTHVGHRKG SDGDAIAIFG
201: SSNIWIDHCY LASCTDGLID VIHASTGITI SNNYFTQHDK VMLLGHNDDF VQDVKMKVTV AFNHFGPGLV ERMPRVRRGY AHVANNRYDK WIMYAIGGSA
301: DPTIFSEGNY FIASDKSNSK EVTKREVKGG WNNWRWRTSK DVFKNGAYFV PSGYGSISLP YSSAQRFTVA PGNLVPSLTA DAGPLNCNRN GPCY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.