Factsheet for AT3G07010.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 6
golgi 5
endoplasmic reticulum 6
plasma membrane 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24654	Canola	endoplasmic reticulum, extracellular, vacuole	96.39	96.39
CDY05305	Canola	endoplasmic reticulum, extracellular, vacuole	95.91	95.91
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	93.03	95.56
AT5G48900.1	Thale cress	extracellular	85.82	85.61
AT1G04680.1	Thale cress	extracellular	78.37	75.64
AT4G13210.2	Thale cress	endoplasmic reticulum, extracellular	79.33	75.34
AT3G24670.1	Thale cress	endoplasmic reticulum, extracellular	78.61	74.32
AT4G24780.1	Thale cress	endoplasmic reticulum, extracellular	68.99	70.34
AT1G67750.1	Thale cress	endoplasmic reticulum, vacuole	68.51	69.85
AT4G13710.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	76.92	68.09
AT3G24230.1	Thale cress	endoplasmic reticulum, golgi, vacuole	69.95	64.38
AT3G27400.2	Thale cress	endoplasmic reticulum, vacuole	64.18	64.18
AT5G63180.1	Thale cress	plastid	65.62	63.19
AT5G55720.1	Thale cress	endoplasmic reticulum, extracellular	52.4	55.61
AT1G11920.1	Thale cress	endoplasmic reticulum, extracellular	50.72	54.95
AT1G30350.1	Thale cress	extracellular	45.67	51.63
AT4G22090.1	Thale cress	extracellular	48.08	50.76
AT4G22080.1	Thale cress	extracellular	48.08	50.76
AT3G53190.1	Thale cress	extracellular	58.65	50.52
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	53.61	46.95
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	53.12	46.82
AT1G14420.1	Thale cress	endoplasmic reticulum	51.2	46.41
AT3G54920.1	Thale cress	extracellular	54.57	45.31
AT5G04310.1	Thale cress	plasma membrane	56.01	44.98
AT2G02720.1	Thale cress	extracellular, vacuole	47.84	43.74

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	EntrezGene:819886	ProteinID:AAF27005.1	ProteinID:AEE74488.1
EMBL:AK317552	ProteinID:ANM65574.1	ArrayExpress:AT3G07010	EnsemblPlantsGene:AT3G07010	RefSeq:AT3G07010	TAIR:AT3G07010
RefSeq:AT3G07010-TAIR-G	EnsemblPlants:AT3G07010.1	TAIR:AT3G07010.1	EMBL:AY085026	InterPro:AmbAllergen	UniProt:B9DHJ9
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872
InterPro:IPR012334	RefSeq:NP_001327532.1	RefSeq:NP_187357.1	PFAM:PF00544	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00807	PANTHER:PTHR31683
PANTHER:PTHR31683:SF34	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	UniProt:Q9M8Z8	SMART:SM00656
SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00000486BD	SEG:seg	:	:

Description

Probable pectate lyase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8Z8]

Coordinates

chr3:-:2212289..2216483

Molecular Weight (calculated)

46176.8 Da

IEP (calculated)

8.417

GRAVY (calculated)

-0.259

Length

416 amino acids

Sequence
(BLAST)

001: MAVTKLILFA SALLLTALFI GVNASRSNET WHEHAVENPD EVAAMVDMSI RNSTERRRLG YFSCATGNPI DDCWRCDRKW QLRRKRLADC SIGFGRNAIG
101: GRDGRFYVVT DPGDDDPVNP IPGTLRHAVI QDEPLWIIFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT NIIVHGIHVH DCKPTGNAMV
201: RSSPSHYGFR SMADGDAISI FGSSHIWIDH NSLSNCADGL VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GESKWKHWNW RSEGDLFLNG AFFTRSGAGA GANYARASSL SAKSSSLVGT
401: MTSYSGALNC RAGRRC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.