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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 92.07 96.75
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 82.59 86.79
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 82.2 86.56
AT3G54920.1 Thale cress extracellular 81.04 83.63
CDY18330 Canola cytosol 18.57 65.75
Solyc11g008140.1.1 Tomato plasma membrane 56.29 64.81
HORVU5Hr1G005000.2 Barley cytosol 42.36 64.22
PGSC0003DMT400079776 Potato plasma membrane 60.15 63.47
VIT_13s0019g04910.t01 Wine grape extracellular 59.38 61.9
CDX70244 Canola vacuole 51.64 60.54
KRG90767 Soybean extracellular 58.41 60.16
KRH35994 Soybean extracellular 57.06 58.53
PGSC0003DMT400011046 Potato mitochondrion 32.88 58.42
CDY11284 Canola extracellular, golgi 57.45 58.24
CDY11033 Canola endoplasmic reticulum, extracellular 45.45 57.88
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.45 57.88
CDX73573 Canola extracellular 53.19 57.77
CDY56520 Canola extracellular 45.45 57.74
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 56.29 57.74
CDX92652 Canola endoplasmic reticulum, extracellular 45.26 57.64
CDY34310 Canola endoplasmic reticulum, vacuole 45.26 57.64
CDY70583 Canola cytosol 27.08 57.61
CDY28857 Canola extracellular 45.26 57.49
CDY03419 Canola endoplasmic reticulum, extracellular 45.07 57.39
CDY24847 Canola endoplasmic reticulum, extracellular 45.07 57.39
CDY32557 Canola extracellular 45.07 57.39
CDY19932 Canola extracellular 46.23 57.18
CDX78152 Canola extracellular 52.61 57.14
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.87 57.14
CDY08948 Canola endoplasmic reticulum, extracellular 44.87 57.14
CDY12666 Canola extracellular 44.87 57.14
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 45.65 57.14
CDY56668 Canola extracellular 46.03 56.94
CDY05655 Canola extracellular 45.84 56.83
CDY33938 Canola extracellular 45.65 56.59
CDY58428 Canola endoplasmic reticulum, golgi, plastid 56.29 56.5
Solyc05g055510.2.1 Tomato plasma membrane 53.97 56.48
CDX89799 Canola extracellular 46.42 55.68
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 44.68 55.53
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.68 55.53
CDY41382 Canola endoplasmic reticulum, golgi 56.48 55.41
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 44.1 55.34
CDY61137 Canola extracellular 46.03 55.22
CDY48132 Canola endoplasmic reticulum, golgi 45.65 55.14
CDX67560 Canola plasma membrane 52.22 55.1
CDY16732 Canola endoplasmic reticulum, golgi 45.45 54.91
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 45.26 54.29
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 45.26 54.29
CDY01119 Canola endoplasmic reticulum, extracellular 45.26 53.79
CDY20049 Canola plastid, vacuole 42.75 53.64
CDY47327 Canola endoplasmic reticulum, extracellular 44.87 53.58
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 46.81 53.54
CDY00156 Canola extracellular, plastid 42.55 53.4
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 46.81 53.19
CDY03964 Canola extracellular 42.36 53.16
CDY46471 Canola endoplasmic reticulum, extracellular 45.07 53.08
CDY65626 Canola golgi 45.45 51.76
CDY18738 Canola endoplasmic reticulum, extracellular 47.2 51.26
CDX98092 Canola extracellular 35.2 51.12
CDX98091 Canola extracellular 36.56 50.94
CDY30040 Canola extracellular 35.01 50.84
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 32.11 50.76
CDY13312 Canola plasma membrane 52.61 50.75
CDY34149 Canola extracellular 35.2 50.7
CDY30041 Canola extracellular 36.17 50.4
CDY06557 Canola extracellular 37.52 50.13
CDY20748 Canola extracellular 37.52 50.0
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 54.55 49.39
CDY66697 Canola endoplasmic reticulum, golgi 41.59 48.1
CDX77400 Canola endoplasmic reticulum, extracellular 45.26 47.56
CDX77470 Canola golgi, plasma membrane 41.97 47.28
CDX79122 Canola extracellular 36.56 47.13
CDY27438 Canola extracellular 36.56 46.32
CDX76388 Canola extracellular 36.36 46.08
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 39.27 44.32
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 39.27 44.32
CDY04133 Canola extracellular 38.68 43.57
CDY17432 Canola extracellular 38.68 43.57
CDY45254 Canola endoplasmic reticulum 38.3 43.23
CDY03043 Canola extracellular 38.1 42.92
CDY39314 Canola extracellular 37.91 42.7
CDY45202 Canola extracellular 37.91 42.7
CDY09356 Canola extracellular 37.72 42.67
CDY41679 Canola endoplasmic reticulum, plasma membrane 37.72 42.67
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 38.68 42.64
CDX74293 Canola endoplasmic reticulum, extracellular 38.49 42.25
CDX91953 Canola endoplasmic reticulum, extracellular 38.49 42.25
CDX78607 Canola endoplasmic reticulum, extracellular 38.68 42.11
CDX70590 Canola endoplasmic reticulum, extracellular 38.49 41.89
CDX85564 Canola extracellular 37.72 41.23
CDX81636 Canola endoplasmic reticulum 38.49 41.12
CDY63769 Canola extracellular 37.91 40.92
CDY53552 Canola extracellular 38.49 40.2
CDX69550 Canola endoplasmic reticulum, extracellular 38.49 39.88
CDY66593 Canola endoplasmic reticulum, extracellular 38.49 39.88
CDY70492 Canola endoplasmic reticulum, extracellular 0.97 9.09
CDX81635 Canola mitochondrion, nucleus 2.32 7.89
CDX96858 Canola mitochondrion, nucleus 2.32 7.89
CDY04136 Canola mitochondrion, nucleus 2.32 7.89
CDY09355 Canola mitochondrion, nucleus 2.32 7.89
CDY41678 Canola mitochondrion, nucleus 2.32 7.89
CDY45199 Canola mitochondrion, nucleus 2.32 7.89
CDY53553 Canola mitochondrion, nucleus 2.32 7.89
CDY66531 Canola mitochondrion, nucleus 2.32 7.89
CDY45253 Canola mitochondrion, nucleus 2.13 7.24
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078C8M1InterPro:AmbAllergenEnsemblPlants:CDX73426
ProteinID:CDX73426ProteinID:CDX73426.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00108923001
InterPro:IPR012334PFAM:PF00544PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF11InterPro:Pec_lyase
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EDEC61SEG:seg:::
Description
BnaC08g25770D
Coordinates
chrLK031799:-:303978..307850
Molecular Weight (calculated)
55223.9 Da
IEP (calculated)
7.397
GRAVY (calculated)
-0.232
Length
517 amino acids
Sequence
(BLAST)
001: MLLPHFSTTI SLLCIFFFTL LQATNLTLPH QHPSPDSVAL HVVSYWGQMP PSHTMWLRHC ASLSRRQLSS SSSSCRTGNP IDDCWRCTSS DWSSNRQRLA
101: DCSIGFGRGT LGGKNGKIYV VTDSSDNNPS NPSPGTLRYA VIQEEPLWIV FSSNMLIRLK HELIINSYKT IDGRGSAVHI TGNGCLTIQY VQHVIIHNVH
201: IYDCKPSGGA VVAATPTKSG RRGRSDGDGI SIFGAQKIWI DHCSMSHCTD GLIDAVMGST AITISNNYFA HHDEVMLLGH DDSYGPDTGM QVTIAFNHFG
301: QGLVQRMPRC RRGYIHVVNN DFTSWKMYAI GGSGNPTINS QGNRYIAPSD PSAKEVTKRV DSKDDGEWSN WNWRTEGDLM ENGAFFVASG GGVSALYSKA
401: SSVEPKASAL VDQLTRNAGV FGGPSRDDQG QTGDSYSGYG GGGGGGGSGG GGGGSSGSDG GTSAIGGTTR GSSTSSSDDS NFFGMIFGSN APPRPRLTLL
501: FCLIMICVMS ISSLLLL
Best Arabidopsis Sequence Match ( AT3G54920.1 )
(BLAST)
001: MLLQNFSNTI FLLCLFFTLL SATKPLNLTL PHQHPSPDSV ALHVIRSVNE SLARRQLSSP SSSSSSSSSS SSSSCRTGNP IDDCWRCSDA DWSTNRQRLA
101: DCSIGFGHGT LGGKNGKIYV VTDSSDNNPT NPTPGTLRYG VIQEEPLWIV FSSNMLIRLK QELIINSYKT LDGRGSAVHI TGNGCLTLQY VQHIIIHNLH
201: IYDCKPSAGF EKRGRSDGDG ISIFGSQKIW VDHCSMSHCT DGLIDAVMGS TAITISNNYF THHDEVMLLG HDDNYAPDTG MQVTIAFNHF GQGLVQRMPR
301: CRRGYIHVVN NDFTEWKMYA IGGSGNPTIN SQGNRYSAPS DPSAKEVTKR VDSKDDGEWS NWNWRTEGDL MENGAFFVAS GEGMSSMYSK ASSVDPKAAS
401: LVDQLTRNAG VFGGPRDDQG QSGNSYSPYG GDGGGGGSSG GSSGGGMDVM GGTTRGSSSS SGDDSNVFQM IFGSDAPSRP RLTLLFSLLM ISVLSLSTLL
501: L
Arabidopsis Description
PMR6Probable pectate lyase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z04]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.