Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70583 | Canola | cytosol | 69.86 | 41.98 |
| Bra004073.1-P | Field mustard | extracellular | 98.63 | 35.38 |
| CDY56520 | Canola | extracellular | 98.63 | 35.38 |
| CDY28857 | Canola | extracellular | 97.26 | 34.89 |
| CDY12666 | Canola | extracellular | 96.58 | 34.73 |
| CDY56220 | Canola | endoplasmic reticulum, extracellular, vacuole | 95.89 | 34.48 |
| CDY32557 | Canola | extracellular | 95.89 | 34.48 |
| CDY01846 | Canola | endoplasmic reticulum, extracellular, vacuole | 95.21 | 34.24 |
| AT1G67750.1 | Thale cress | endoplasmic reticulum, vacuole | 95.21 | 34.07 |
| CDY34149 | Canola | extracellular | 76.03 | 30.92 |
| KRG97506 | Soybean | endoplasmic reticulum, golgi | 84.25 | 30.37 |
| KRH31375 | Soybean | nucleus | 83.56 | 30.35 |
| CDY24847 | Canola | endoplasmic reticulum, extracellular | 81.51 | 29.31 |
| CDY34310 | Canola | endoplasmic reticulum, vacuole | 81.51 | 29.31 |
| CDY08948 | Canola | endoplasmic reticulum, extracellular | 81.51 | 29.31 |
| CDY03419 | Canola | endoplasmic reticulum, extracellular | 81.51 | 29.31 |
| CDY11033 | Canola | endoplasmic reticulum, extracellular | 80.82 | 29.06 |
| CDX92652 | Canola | endoplasmic reticulum, extracellular | 80.14 | 28.82 |
| CDX83690 | Canola | endoplasmic reticulum, extracellular, vacuole | 80.82 | 28.64 |
| CDY03964 | Canola | extracellular | 80.82 | 28.64 |
| CDY20049 | Canola | plastid, vacuole | 79.45 | 28.16 |
| CDY00156 | Canola | extracellular, plastid | 79.45 | 28.16 |
| CDY41506 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.08 | 27.6 |
| CDY05305 | Canola | endoplasmic reticulum, extracellular, vacuole | 77.4 | 27.16 |
| CDY24654 | Canola | endoplasmic reticulum, extracellular, vacuole | 77.4 | 27.16 |
| CDY16732 | Canola | endoplasmic reticulum, golgi | 79.45 | 27.1 |
| CDY48132 | Canola | endoplasmic reticulum, golgi | 79.45 | 27.1 |
| CDY56668 | Canola | extracellular | 74.66 | 26.08 |
| CDY19932 | Canola | extracellular | 74.66 | 26.08 |
| CDY05655 | Canola | extracellular | 73.97 | 25.9 |
| CDY33938 | Canola | extracellular | 73.97 | 25.9 |
| CDY65626 | Canola | golgi | 78.08 | 25.11 |
| CDY15517 | Canola | endoplasmic reticulum, extracellular, golgi | 73.29 | 24.83 |
| CDX89799 | Canola | extracellular | 73.29 | 24.83 |
| CDX86615 | Canola | endoplasmic reticulum, extracellular, golgi | 73.29 | 24.83 |
| CDY61137 | Canola | extracellular | 73.29 | 24.83 |
| CDY47327 | Canola | endoplasmic reticulum, extracellular | 73.29 | 24.71 |
| CDY01119 | Canola | endoplasmic reticulum, extracellular | 73.29 | 24.6 |
| CDY46471 | Canola | endoplasmic reticulum, extracellular | 71.92 | 23.92 |
| CDY01151 | Canola | endoplasmic reticulum, extracellular, vacuole | 73.29 | 23.67 |
| CDY53564 | Canola | endoplasmic reticulum, extracellular, vacuole | 73.29 | 23.52 |
| CDY06557 | Canola | extracellular | 61.64 | 23.26 |
| CDY20748 | Canola | extracellular | 61.64 | 23.2 |
| CDY18738 | Canola | endoplasmic reticulum, extracellular | 72.6 | 22.27 |
| CDY66697 | Canola | endoplasmic reticulum, golgi | 66.44 | 21.7 |
| CDX77470 | Canola | golgi, plasma membrane | 67.12 | 21.35 |
| CDX77400 | Canola | endoplasmic reticulum, extracellular | 71.92 | 21.34 |
| CDX70244 | Canola | vacuole | 63.7 | 21.09 |
| CDY30040 | Canola | extracellular | 50.0 | 20.51 |
| CDX98092 | Canola | extracellular | 49.32 | 20.22 |
| CDX98091 | Canola | extracellular | 51.37 | 20.22 |
| CDY30041 | Canola | extracellular | 50.68 | 19.95 |
| CDY56964 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.75 | 19.51 |
| CDX79122 | Canola | extracellular | 53.42 | 19.45 |
| CDX67615 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.7 | 18.94 |
| CDY07515 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.7 | 18.9 |
| CDX76388 | Canola | extracellular | 52.74 | 18.87 |
| CDY27438 | Canola | extracellular | 52.74 | 18.87 |
| CDX78152 | Canola | extracellular | 60.96 | 18.7 |
| CDY11284 | Canola | extracellular, golgi | 65.07 | 18.63 |
| CDX73426 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.75 | 18.57 |
| CDX73573 | Canola | extracellular | 59.59 | 18.28 |
| CDY58428 | Canola | endoplasmic reticulum, golgi, plastid | 64.38 | 18.25 |
| CDX67560 | Canola | plasma membrane | 60.96 | 18.16 |
| CDY41382 | Canola | endoplasmic reticulum, golgi | 64.38 | 17.84 |
| CDY17432 | Canola | extracellular | 54.79 | 17.43 |
| CDY04133 | Canola | extracellular | 54.79 | 17.43 |
| CDX96854 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.11 | 17.25 |
| CDY41679 | Canola | endoplasmic reticulum, plasma membrane | 53.42 | 17.07 |
| CDY28691 | Canola | endoplasmic reticulum, extracellular, vacuole | 54.79 | 17.06 |
| CDY68729 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 53.42 | 17.03 |
| CDY03043 | Canola | extracellular | 53.42 | 16.99 |
| CDY45202 | Canola | extracellular | 53.42 | 16.99 |
| CDX74293 | Canola | endoplasmic reticulum, extracellular | 54.79 | 16.99 |
| CDX91953 | Canola | endoplasmic reticulum, extracellular | 54.79 | 16.99 |
| CDY09356 | Canola | extracellular | 52.74 | 16.85 |
| CDX82902 | Canola | endoplasmic reticulum, extracellular, vacuole | 37.67 | 16.82 |
| CDX81636 | Canola | endoplasmic reticulum | 55.48 | 16.74 |
| CDX78607 | Canola | endoplasmic reticulum, extracellular | 54.11 | 16.63 |
| CDX70590 | Canola | endoplasmic reticulum, extracellular | 54.11 | 16.63 |
| CDY13312 | Canola | plasma membrane | 60.96 | 16.6 |
| CDY45254 | Canola | endoplasmic reticulum | 51.37 | 16.38 |
| CDY53552 | Canola | extracellular | 55.48 | 16.36 |
| CDY39314 | Canola | extracellular | 51.37 | 16.34 |
| CDX85564 | Canola | extracellular | 52.05 | 16.07 |
| CDY63769 | Canola | extracellular | 52.05 | 15.87 |
| CDY66593 | Canola | endoplasmic reticulum, extracellular | 52.74 | 15.43 |
| CDX69550 | Canola | endoplasmic reticulum, extracellular | 52.74 | 15.43 |
| CDY45199 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDX96858 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY53553 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY09355 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY66531 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDX81635 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY41678 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY70492 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| CDY04136 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
| CDY45253 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00040+4.2.2.2 | Gene3D:2.160.20.10 | MapMan:50.4.2 | GO:A0A078FV49 | UniProt:A0A078FV49 | InterPro:AmbAllergen |
| EnsemblPlants:CDY18330 | ProteinID:CDY18330 | ProteinID:CDY18330.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0030570 | GO:GO:0045490 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00002915001 | InterPro:IPR012334 | PFAM:PF00544 |
| PRINTS:PR00807 | PANTHER:PTHR31683 | PANTHER:PTHR31683:SF28 | InterPro:Pec_lyase | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
| SUPFAM:SSF51126 | UniPathway:UPA00545 | UniParc:UPI0004EED4DE | SEG:seg | : | : |
Description
BnaC09g30800DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FV49]
Coordinates
chrLK032084:-:491727..492643
Molecular Weight (calculated)
16177.9 Da
IEP (calculated)
9.421
GRAVY (calculated)
-0.449
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGHSDSYT RDKNMQVTIA FNHFGEGLVQ RMPRCRHGYF HVVNNDYTHW QMYAIGGSAA PTINSQGNRF LAPNDHVFKE VTKYEDAPQS KWLNWNWRSE
101: GDLFLNGAFF TPSGGRASSS YAKASSLSAR PSSLVASVTG NAGSLL
101: GDLFLNGAFF TPSGGRASSS YAKASSLSAR PSSLVASVTG NAGSLL
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.