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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035852.1-P Field mustard extracellular 95.56 99.76
CDY48132 Canola endoplasmic reticulum, golgi 99.53 99.53
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 90.65 93.95
AT5G63180.1 Thale cress plastid 89.02 88.19
CDY65626 Canola golgi 91.12 85.9
VIT_17s0000g09810.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 76.4 81.14
CDY24847 Canola endoplasmic reticulum, extracellular 76.64 80.79
VIT_01s0137g00240.t01 Wine grape extracellular 75.93 80.65
CDY03419 Canola endoplasmic reticulum, extracellular 76.17 80.3
CDY08948 Canola endoplasmic reticulum, extracellular 76.17 80.3
CDY34310 Canola endoplasmic reticulum, vacuole 76.17 80.3
PGSC0003DMT400027955 Potato extracellular 74.77 79.8
Solyc05g014000.2.1 Tomato extracellular, nucleus 74.77 79.8
CDY18330 Canola cytosol 27.1 79.45
GSMUA_Achr6P28260_001 Banana endoplasmic reticulum, extracellular 75.47 79.36
CDX92652 Canola endoplasmic reticulum, extracellular 75.0 79.06
CDY11033 Canola endoplasmic reticulum, extracellular 75.0 79.06
CDY70583 Canola cytosol 44.39 78.19
CDY28857 Canola extracellular 72.9 76.66
CDY56520 Canola extracellular 72.9 76.66
CDY12666 Canola extracellular 72.66 76.6
CDY32557 Canola extracellular 72.43 76.35
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 72.43 76.35
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 72.2 76.11
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 68.22 70.87
CDY20049 Canola plastid, vacuole 67.29 69.9
CDY00156 Canola extracellular, plastid 67.06 69.66
CDY03964 Canola extracellular 66.59 69.17
CDY19932 Canola extracellular 65.89 67.46
CDY34149 Canola extracellular 56.54 67.41
CDY56668 Canola extracellular 65.65 67.22
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 64.95 66.83
CDY05655 Canola extracellular 64.95 66.67
CDY33938 Canola extracellular 64.95 66.67
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 64.49 66.35
CDY47327 Canola endoplasmic reticulum, extracellular 65.42 64.67
CDY01119 Canola endoplasmic reticulum, extracellular 65.65 64.6
CDX89799 Canola extracellular 64.49 64.04
CDY61137 Canola extracellular 64.02 63.57
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 63.78 63.34
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 63.78 63.34
CDY46471 Canola endoplasmic reticulum, extracellular 64.49 62.87
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 64.95 61.1
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 64.49 61.06
CDY18738 Canola endoplasmic reticulum, extracellular 64.72 58.19
CDY06557 Canola extracellular 51.87 57.36
CDY20748 Canola extracellular 51.87 57.22
CDY66697 Canola endoplasmic reticulum, golgi 59.35 56.82
CDX77470 Canola golgi, plasma membrane 60.28 56.21
CDX77400 Canola endoplasmic reticulum, extracellular 64.49 56.1
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 41.36 54.13
CDX98092 Canola extracellular 44.39 53.37
CDY30040 Canola extracellular 44.16 53.09
CDX98091 Canola extracellular 44.86 51.75
CDY30041 Canola extracellular 44.63 51.48
CDX78152 Canola extracellular 57.01 51.26
CDX73573 Canola extracellular 56.78 51.05
CDX70244 Canola vacuole 52.34 50.79
CDX67560 Canola plasma membrane 57.94 50.61
CDX79122 Canola extracellular 46.03 49.13
CDX76388 Canola extracellular 46.5 48.77
CDY27438 Canola extracellular 46.5 48.77
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 55.61 48.37
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 54.91 47.86
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 54.21 47.15
CDY17432 Canola extracellular 50.0 46.62
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 50.93 46.48
CDY11284 Canola extracellular, golgi 55.14 46.27
CDX70590 Canola endoplasmic reticulum, extracellular 51.17 46.11
CDX78607 Canola endoplasmic reticulum, extracellular 51.17 46.11
CDY04133 Canola extracellular 49.3 45.97
CDX74293 Canola endoplasmic reticulum, extracellular 50.47 45.86
CDX91953 Canola endoplasmic reticulum, extracellular 50.47 45.86
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 48.83 45.63
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.83 45.63
CDY63769 Canola extracellular 50.93 45.51
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 54.91 45.45
CDX85564 Canola extracellular 50.23 45.45
CDY13312 Canola plasma membrane 56.54 45.15
CDY41679 Canola endoplasmic reticulum, plasma membrane 48.13 45.08
CDY58428 Canola endoplasmic reticulum, golgi, plastid 54.21 45.05
CDY03043 Canola extracellular 48.13 44.88
CDY45202 Canola extracellular 48.13 44.88
CDY09356 Canola extracellular 47.66 44.64
CDY45254 Canola endoplasmic reticulum 47.2 44.1
CDY41382 Canola endoplasmic reticulum, golgi 53.97 43.83
CDY39314 Canola extracellular 46.96 43.79
CDX69550 Canola endoplasmic reticulum, extracellular 50.7 43.49
CDY66593 Canola endoplasmic reticulum, extracellular 50.7 43.49
CDX81636 Canola endoplasmic reticulum 47.66 42.15
CDY53552 Canola extracellular 48.6 42.02
CDY70492 Canola endoplasmic reticulum, extracellular 0.7 5.45
CDX81635 Canola mitochondrion, nucleus 0.7 1.97
CDX96858 Canola mitochondrion, nucleus 0.7 1.97
CDY04136 Canola mitochondrion, nucleus 0.7 1.97
CDY09355 Canola mitochondrion, nucleus 0.7 1.97
CDY41678 Canola mitochondrion, nucleus 0.7 1.97
CDY45199 Canola mitochondrion, nucleus 0.7 1.97
CDY45253 Canola mitochondrion, nucleus 0.7 1.97
CDY53553 Canola mitochondrion, nucleus 0.7 1.97
CDY66531 Canola mitochondrion, nucleus 0.7 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078FVB5UniProt:A0A078FVB5InterPro:AmbAllergen
EnsemblPlants:CDY16732ProteinID:CDY16732ProteinID:CDY16732.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00094600001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF28
InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126TMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EF01B1SEG:seg:::
Description
BnaA09g06500DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FVB5]
Coordinates
chrLK032067:+:79207..82765
Molecular Weight (calculated)
47536.0 Da
IEP (calculated)
6.701
GRAVY (calculated)
-0.360
Length
428 amino acids
Sequence
(BLAST)
001: MFHPKTLKLY LQQEAKNTML VSSHASFTLV FLYCIFFSAV ALSLPVSDPE LVVEEVHRQI NESISRRNLG YFSCETGNPI DDCWRCDKDW EKNRKQLADC
101: GIGFGKNAIG GRDGEFYVVT DPGNDDPVNP KPGTLRYAVI QDQPLWIIFN RDMTIQLKEE LIMNSFKTLD GRGASVHISG GPCITIQYVT NIIIHGLHIH
201: DCKQGGNTYV RDSPEHYGWR TISDGDGVSI FGGSHVWVDH CSLSNCNDGL IDAIRGSTAI TISNNYLTHH NKVMLLGHSD TYVQDKNMQV TIAFNHFGEG
301: LVQRMPRCRH GYFHVVNNDY THWEMYAIGG SANPTINSQG NRFLAPNGPF DKEVTKHEDA PESEWSHWNW RSEGDLMLNG AFFTLSGAGP GKSSSYSKAS
401: SLAARPSSHV GEITIASGAL SCKKGSHC
Best Arabidopsis Sequence Match ( AT5G63180.1 )
(BLAST)
001: MFRPNSLLIP SNLSTTKSQR NTMLNSSYLS FALIFFCCIL FSALASSLPV SDPELVVEEV HRKINESISR RKLGFFSCGS GNPIDDCWRC DKDWEKNRKR
101: LADCGIGFGK NAIGGRDGEI YVVTDPGNDD PVNPRPGTLR YAVIQDEPLW IIFKRDMTIQ LKEELIMNSF KTLDGRGASV HISGGPCITI QYVTNIIIHG
201: LHIHDCKQGG NTYVRDSPEH YGYRTVSDGD GVSIFGGSHV WVDHCSLSNC NDGLIDAIRG STAITISNNY LTHHNKVMLL GHSDTYEQDK NMQVTIAFNH
301: FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFLAP DDSSSKEVTK HEDAPEDEWR NWNWRSEGDL LLNGAFFTYS GAGPAKSSSY
401: SKASSLAARP SSHVGEITIA SGALSCKRGS HC
Arabidopsis Description
Probable pectate lyase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z25]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.