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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039081.1-P Field mustard extracellular, plastid 99.76 99.76
CDY00156 Canola extracellular, plastid 99.51 99.51
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 90.53 90.53
CDY34149 Canola extracellular 77.43 88.86
AT3G27400.2 Thale cress endoplasmic reticulum, vacuole 89.56 88.7
CDY03964 Canola extracellular 88.11 88.11
CDY18330 Canola cytosol 28.16 79.45
KRG93976 Soybean extracellular 74.76 76.24
KRH58231 Soybean extracellular 74.76 76.24
Solyc02g093580.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 74.51 75.99
PGSC0003DMT400032910 Potato endoplasmic reticulum, extracellular, vacuole 74.27 75.93
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 74.27 75.93
CDY08948 Canola endoplasmic reticulum, extracellular 73.06 74.14
CDY24847 Canola endoplasmic reticulum, extracellular 72.82 73.89
CDY34310 Canola endoplasmic reticulum, vacuole 72.09 73.15
CDY03419 Canola endoplasmic reticulum, extracellular 71.84 72.91
CDX92652 Canola endoplasmic reticulum, extracellular 71.36 72.41
CDY11033 Canola endoplasmic reticulum, extracellular 71.12 72.17
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 70.63 71.67
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 70.39 71.43
CDY28857 Canola extracellular 70.15 71.01
CDY56520 Canola extracellular 70.15 71.01
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 71.12 70.94
CDY12666 Canola extracellular 69.42 70.44
CDY70583 Canola cytosol 41.5 70.37
CDY32557 Canola extracellular 69.17 70.2
CDY48132 Canola endoplasmic reticulum, golgi 70.15 67.52
CDY16732 Canola endoplasmic reticulum, golgi 69.9 67.29
CDY65626 Canola golgi 70.87 64.32
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 64.08 63.46
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 63.84 63.22
CDY56668 Canola extracellular 63.59 62.68
CDY19932 Canola extracellular 63.35 62.44
CDY05655 Canola extracellular 62.62 61.87
CDY33938 Canola extracellular 62.62 61.87
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 63.35 60.56
CDX89799 Canola extracellular 63.35 60.56
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 63.11 60.32
CDY61137 Canola extracellular 63.11 60.32
CDY47327 Canola endoplasmic reticulum, extracellular 62.38 59.35
CDY01119 Canola endoplasmic reticulum, extracellular 62.62 59.31
CDY46471 Canola endoplasmic reticulum, extracellular 62.14 58.31
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 64.32 58.24
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 63.59 57.96
CDY18738 Canola endoplasmic reticulum, extracellular 64.56 55.88
CDY66697 Canola endoplasmic reticulum, golgi 59.95 55.26
CDX98092 Canola extracellular 47.57 55.06
CDY30040 Canola extracellular 47.33 54.78
CDX98091 Canola extracellular 49.27 54.72
CDY06557 Canola extracellular 51.21 54.52
CDX77470 Canola golgi, plasma membrane 60.68 54.47
CDY20748 Canola extracellular 51.21 54.38
CDY30041 Canola extracellular 48.79 54.18
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 42.48 53.52
CDX77400 Canola endoplasmic reticulum, extracellular 61.89 51.83
CDX79122 Canola extracellular 48.54 49.88
CDX70244 Canola vacuole 52.67 49.21
CDX76388 Canola extracellular 47.82 48.28
CDY27438 Canola extracellular 47.82 48.28
CDX78152 Canola extracellular 55.34 47.9
CDX73573 Canola extracellular 55.1 47.69
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.16 46.7
CDX74293 Canola endoplasmic reticulum, extracellular 53.16 46.5
CDX91953 Canola endoplasmic reticulum, extracellular 53.16 46.5
CDX67560 Canola plasma membrane 55.1 46.33
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.46 46.29
CDY17432 Canola extracellular 51.46 46.19
CDX70590 Canola endoplasmic reticulum, extracellular 53.16 46.11
CDY41679 Canola endoplasmic reticulum, plasma membrane 50.97 45.95
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.97 45.85
CDY03043 Canola extracellular 50.97 45.75
CDY04133 Canola extracellular 50.97 45.75
CDY09356 Canola extracellular 50.73 45.73
CDX78607 Canola endoplasmic reticulum, extracellular 52.67 45.68
CDX85564 Canola extracellular 52.18 45.45
CDY45202 Canola extracellular 50.49 45.32
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 53.88 45.12
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 53.64 45.01
CDY45254 Canola endoplasmic reticulum 50.0 44.98
CDY63769 Canola extracellular 52.18 44.89
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 53.4 44.72
CDY39314 Canola extracellular 49.76 44.66
CDY11284 Canola extracellular, golgi 54.37 43.92
CDX69550 Canola endoplasmic reticulum, extracellular 52.67 43.49
CDY66593 Canola endoplasmic reticulum, extracellular 52.67 43.49
CDX81636 Canola endoplasmic reticulum 50.73 43.18
CDY58428 Canola endoplasmic reticulum, golgi, plastid 53.88 43.11
CDY53552 Canola extracellular 51.7 43.03
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 53.64 42.75
CDY41382 Canola endoplasmic reticulum, golgi 54.37 42.5
CDY13312 Canola plasma membrane 54.85 42.16
CDY70492 Canola endoplasmic reticulum, extracellular 0.73 5.45
CDX81635 Canola mitochondrion, nucleus 0.49 1.32
CDX96858 Canola mitochondrion, nucleus 0.49 1.32
CDY04136 Canola mitochondrion, nucleus 0.49 1.32
CDY09355 Canola mitochondrion, nucleus 0.49 1.32
CDY41678 Canola mitochondrion, nucleus 0.49 1.32
CDY45199 Canola mitochondrion, nucleus 0.49 1.32
CDY45253 Canola mitochondrion, nucleus 0.49 1.32
CDY53553 Canola mitochondrion, nucleus 0.49 1.32
CDY66531 Canola mitochondrion, nucleus 0.49 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078G3T8UniProt:A0A078G3T8InterPro:AmbAllergen
EnsemblPlants:CDY20049ProteinID:CDY20049ProteinID:CDY20049.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00009890001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF29InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126UniPathway:UPA00545UniParc:UPI0004EEF017SEG:seg:
Description
BnaA09g02020DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078G3T8]
Coordinates
chrLK032102:-:621632..624013
Molecular Weight (calculated)
45576.6 Da
IEP (calculated)
7.123
GRAVY (calculated)
-0.390
Length
412 amino acids
Sequence
(BLAST)
001: MFSYSSNPFV YTFIFILSIG NRIAFSSSSS PQAQDPKLVV DEVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWDTNR QRLADCAIGF GKNAIGGRDG
101: RIYVVTDPGN DDPVNPIPGT LRHAVTQEEP LWIIFKRDMV IKLQKELIIT SFKTIDGRGA SVHITDGPCL KIHEKTNIII HGINIHDCKP GPGGMIRDGP
201: DHTGMWIPSD GDAVAIFGGK NVWIDHCSLS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHSDSYTE DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIYSQGNRFL APDTRFNKEV TKHEDAPESQ WRDWNWRSEG DMLLNGAYFR QSGAGAPSTY ARASSLSARP SSLVGSITTT
401: AGALSCRRGG HC
Best Arabidopsis Sequence Match ( AT3G27400.2 )
(BLAST)
001: MFRRMVSYSN NHFAYAFLLL LTIGNTLAFS SSLPDHVQDP NLVVDDVNRS VFNASRRSLA YLSCRTGNPI DDCWRCDPNW ETNRQRLADC AIGFGKNAIG
101: GRKGRIYVVT DPANDDPVNP RPGTLRYAVT QEEPLWIIFK RDMVIRLKKE LIITSFKTID GRGSSVHITD GPCLKIHYAT NIIIHGINIH DCKPGSGGMI
201: KDGPHHTGWW MQSDGDAVAI FGGKHVWIDH CSLSNCDDGL IDAIHGSTAI TISNNHMTHH DKVMLLGHSD SYTQDKNMQV TIAFNHFGEG LVQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SASPTIYSQG NRFLAPNTRF NKEVTKHEDA PESKWRDWNW RSEGDMLLNG AYFRESGAEA PSTYARASSL SARPSSLVGS
401: ITTTAGTLSC RRGRRC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.