CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93976	Soybean	extracellular	97.28	97.28
VIT_14s0219g00230.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	83.17	83.37
KRH03893	Soybean	nucleus	82.92	82.51
KRH57176	Soybean	nucleus	82.67	82.27
Solyc02g093580.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	80.94	80.94
PGSC0003DMT400032910	Potato	endoplasmic reticulum, extracellular, vacuole	80.45	80.65
KRH54276	Soybean	endoplasmic reticulum, golgi, vacuole	80.45	79.66
KRH63675	Soybean	endoplasmic reticulum, extracellular, vacuole	80.2	79.41
CDX83690	Canola	endoplasmic reticulum, extracellular, vacuole	78.96	77.43
Bra025274.1-P	Field mustard	extracellular	78.22	76.7
KRH31375	Soybean	nucleus	75.25	75.62
KRG97506	Soybean	endoplasmic reticulum, golgi	75.5	75.31
CDY00156	Canola	extracellular, plastid	76.73	75.24
AT3G27400.2	Thale cress	endoplasmic reticulum, vacuole	77.48	75.24
Bra039081.1-P	Field mustard	extracellular, plastid	76.49	75.0
CDY20049	Canola	plastid, vacuole	76.24	74.76
CDY03964	Canola	extracellular	75.5	74.03
Bra033008.1-P	Field mustard	extracellular	72.77	73.87
CDY34149	Canola	extracellular	65.1	73.26
KRG97507	Soybean	endoplasmic reticulum, extracellular	68.56	70.66
KRH31373	Soybean	extracellular	64.85	70.62
KRG90246	Soybean	nucleus	70.79	63.84
KRH33474	Soybean	nucleus	70.05	62.89
KRG99852	Soybean	nucleus	68.81	61.64
KRH46795	Soybean	nucleus	68.32	61.2
KRH11474	Soybean	extracellular	53.47	57.91
KRH02031	Soybean	extracellular	55.2	56.03
KRH36488	Soybean	extracellular	53.71	54.66
KRH67761	Soybean	endoplasmic reticulum, extracellular, vacuole	62.62	53.83
KRH54508	Soybean	extracellular	44.31	53.75
KRH36487	Soybean	extracellular	37.13	52.63
KRH19954	Soybean	endoplasmic reticulum, extracellular, plasma membrane	61.63	52.2
KRH63402	Soybean	extracellular	55.69	51.72
KRH45851	Soybean	extracellular	56.19	50.33
KRH01130	Soybean	extracellular	54.46	50.0
KRH35994	Soybean	extracellular	62.13	49.8
KRG90767	Soybean	extracellular	61.88	49.8
KRH74782	Soybean	extracellular	55.2	49.78
KRH69345	Soybean	extracellular	54.21	48.99
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	53.22	48.53
KRG93502	Soybean	extracellular	52.72	48.08

Protein Annotations

KEGG:00040+4.2.2.2	EntrezGene:100794814	Gene3D:2.160.20.10	MapMan:21.3.5.2	EMBL:ACUP02003234	InterPro:AmbAllergen
EnsemblPlantsGene:GLYMA_05G114000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	UniProt:I1K2L2	InterPro:IPR012334	EnsemblPlants:KRH58231	ProteinID:KRH58231	ProteinID:KRH58231.1
PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF29	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI000233A572	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:30173156..30176087

Molecular Weight (calculated)

44667.6 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.367

Length

404 amino acids

Sequence
(BLAST)

001: MAPLSCYLVV FALSLLKPSF VSSSAVRDPE LVVQEVQRSI NASRRNLGYL SCGTGNPIDD CWRCDPNWEN NRQRLADCSI GFGKDAIGGK NGRIYVVTDS
101: GDDDAVNPRP GTLRYAAIQD EPLWIMFKRD MVITLKEELL VNSFKTIDGR GASVHIAGGG CITIHYVSNI IIHGIHIHDC KPTGNTNIRD SPHHSGFWTQ
201: SDGDGVSIFN SKHIWVDHCS LSNCRDGLID AIHGSTAITI SNNYMTHHDK VMLLGHSDSY TQDKDMQVTI AFNHFGEGLV QRMPRCRHGY FHVVNNDYTH
301: WEMYAIGGSA NPTINSQGNR FLAPNIRFSK EVTKHEDAPQ SEWMGWNWRS EGDMFLNGAY FRQSGAGASS SYARASSLSA RPSSLVGSMT TTAGALNCRK
401: GNRC

Best Arabidopsis Sequence Match ( AT3G27400.2 )
(BLAST)

001: MFRRMVSYSN NHFAYAFLLL LTIGNTLAFS SSLPDHVQDP NLVVDDVNRS VFNASRRSLA YLSCRTGNPI DDCWRCDPNW ETNRQRLADC AIGFGKNAIG
101: GRKGRIYVVT DPANDDPVNP RPGTLRYAVT QEEPLWIIFK RDMVIRLKKE LIITSFKTID GRGSSVHITD GPCLKIHYAT NIIIHGINIH DCKPGSGGMI
201: KDGPHHTGWW MQSDGDAVAI FGGKHVWIDH CSLSNCDDGL IDAIHGSTAI TISNNHMTHH DKVMLLGHSD SYTQDKNMQV TIAFNHFGEG LVQRMPRCRH
301: GYFHVVNNDY THWEMYAIGG SASPTIYSQG NRFLAPNTRF NKEVTKHEDA PESKWRDWNW RSEGDMLLNG AYFRESGAEA PSTYARASSL SARPSSLVGS
401: ITTTAGTLSC RRGRRC

Arabidopsis Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.