CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11474	Soybean	extracellular	84.21	64.34
KRH02031	Soybean	extracellular	74.39	53.27
KRH36488	Soybean	extracellular	70.53	50.63
VIT_10s0116g01160.t01	Wine grape	endoplasmic reticulum, extracellular	65.61	49.08
PGSC0003DMT400042395	Potato	extracellular	62.11	46.46
KRH03893	Soybean	nucleus	56.49	39.66
KRH57176	Soybean	nucleus	56.14	39.41
KRG93976	Soybean	extracellular	54.04	38.12
KRH31375	Soybean	nucleus	53.68	38.06
KRH63675	Soybean	endoplasmic reticulum, extracellular, vacuole	54.39	37.99
KRH54276	Soybean	endoplasmic reticulum, golgi, vacuole	54.04	37.75
KRG97506	Soybean	endoplasmic reticulum, golgi	53.33	37.53
KRH58231	Soybean	extracellular	52.63	37.13
KRG97507	Soybean	endoplasmic reticulum, extracellular	50.88	36.99
KRH31373	Soybean	extracellular	44.91	34.5
KRG90246	Soybean	nucleus	52.63	33.48
KRH33474	Soybean	nucleus	52.63	33.33
KRH46795	Soybean	nucleus	52.28	33.04
KRG99852	Soybean	nucleus	52.28	33.04
KRH54508	Soybean	extracellular	36.84	31.53
KRH45851	Soybean	extracellular	49.47	31.26
KRH74782	Soybean	extracellular	48.42	30.8
KRH19954	Soybean	endoplasmic reticulum, extracellular, plasma membrane	50.88	30.4
KRH69345	Soybean	extracellular	47.37	30.2
KRG93502	Soybean	extracellular	46.67	30.02
KRH67761	Soybean	endoplasmic reticulum, extracellular, vacuole	49.47	30.0
KRH01130	Soybean	extracellular	45.61	29.55
KRH63402	Soybean	extracellular	44.91	29.43
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	45.26	29.12
KRG90767	Soybean	extracellular	50.18	28.49
CDY45254	Canola	endoplasmic reticulum	45.61	28.38
CDY41679	Canola	endoplasmic reticulum, plasma membrane	45.26	28.23
CDY09356	Canola	extracellular	45.26	28.23
KRH35994	Soybean	extracellular	49.82	28.17
Solyc02g080910.2.1	Tomato	extracellular	62.81	23.58
CDY70492	Canola	endoplasmic reticulum, extracellular	1.4	7.27
CDX96858	Canola	mitochondrion, nucleus	0.0	0.0
CDY09355	Canola	mitochondrion, nucleus	0.0	0.0
CDY66531	Canola	mitochondrion, nucleus	0.0	0.0
CDY53553	Canola	mitochondrion, nucleus	0.0	0.0
CDY45253	Canola	mitochondrion, nucleus	0.0	0.0
CDY45199	Canola	mitochondrion, nucleus	0.0	0.0
CDY41678	Canola	mitochondrion, nucleus	0.0	0.0
CDX81635	Canola	mitochondrion, nucleus	0.0	0.0

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A0R0I1P6	EMBL:ACUP02005377	InterPro:AmbAllergen
EnsemblPlantsGene:GLYMA_09G005900	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	EnsemblPlants:KRH36487	ProteinID:KRH36487	ProteinID:KRH36487.1	PFAM:PF00544
PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF18	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0006ED8A12	:	:

Description

hypothetical protein

Coordinates

chr9:-:459265..461797

Molecular Weight (calculated)

31293.7 Da

IEP (calculated)

9.363

GRAVY (calculated)

0.010

Length

285 amino acids

Sequence
(BLAST)

001: MATSPTLLLI SCFILHLAYS TESAILNRID SCWRAKSNWA SNRQAMANCA IGFGKDAVGG YPKTGTLHYG VIQKQTLCII FAKDMVIRLK NELIMNSYKT
101: IDGRGAKVEI ANRPCITIQG VSHVIMHGIK IHDCKPSKVG LVRSTQSHLC SDGDGIGIFA SSNVWIDHCF LARCADGLID VIHASTSITI SNNYFTQHDR
201: LAIPSSLSFV YAVSFSSFNR FASGLIERMP RVRFGYAHVV NNKYDGWKMY AIGGSSNPTI LSEGNYYVAP NNPATKQVRK GISSE

Best Arabidopsis Sequence Match ( AT1G04680.1 )
(BLAST)

001: MAVLPTWLLA MMCLLFFVGA MENTTHDNIS SLPRSDETEW NQHAVTNPDE VADEVLALTE MSVRNHTERR KLGYFTCGTG NPIDDCWRCD PNWHKNRKRL
101: ADCGIGFGRN AIGGRDGRFY VVTDPRDDNP VNPRPGTLRH AVIQDRPLWI VFKRDMVIQL KQELIVNSFK TIDGRGANVH IANGGCITIQ FVTNVIVHGL
201: HIHDCKPTGN AMVRSSETHF GWRTMADGDA ISIFGSSHVW IDHNSLSHCA DGLVDAVMGS TAITISNNHL THHNEVMLLG HSDSYMRDKA MQVTIAYNHF
301: GVGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSANPTIN SQGNRYAAPK NPFAKEVTKR VDTPASHWKG WNWRSEGDLL QNGAYFTSSG AAASGSYARA
401: SSLSAKSSSL VGHITSDAGA LPCRRGRQCS S

Arabidopsis Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178W464]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.