CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58231	Soybean	extracellular	97.28	97.28
VIT_14s0219g00230.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	83.42	83.62
KRH57176	Soybean	nucleus	83.17	82.76
KRH03893	Soybean	nucleus	83.17	82.76
Solyc02g093580.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	80.69	80.69
PGSC0003DMT400032910	Potato	endoplasmic reticulum, extracellular, vacuole	79.95	80.15
KRH63675	Soybean	endoplasmic reticulum, extracellular, vacuole	80.45	79.66
KRH54276	Soybean	endoplasmic reticulum, golgi, vacuole	80.2	79.41
CDX83690	Canola	endoplasmic reticulum, extracellular, vacuole	78.96	77.43
Bra025274.1-P	Field mustard	extracellular	78.22	76.7
AT3G27400.2	Thale cress	endoplasmic reticulum, vacuole	77.72	75.48
CDY00156	Canola	extracellular, plastid	76.73	75.24
Bra039081.1-P	Field mustard	extracellular, plastid	76.49	75.0
KRG97506	Soybean	endoplasmic reticulum, golgi	75.0	74.81
CDY20049	Canola	plastid, vacuole	76.24	74.76
KRH31375	Soybean	nucleus	74.26	74.63
CDY03964	Canola	extracellular	75.5	74.03
Bra033008.1-P	Field mustard	extracellular	72.77	73.87
CDY34149	Canola	extracellular	65.1	73.26
KRG97507	Soybean	endoplasmic reticulum, extracellular	68.07	70.15
KRH31373	Soybean	extracellular	64.11	69.81
KRG90246	Soybean	nucleus	70.54	63.62
KRH33474	Soybean	nucleus	69.8	62.67
KRG99852	Soybean	nucleus	68.32	61.2
KRH46795	Soybean	nucleus	68.07	60.98
KRH11474	Soybean	extracellular	54.46	58.98
KRH02031	Soybean	extracellular	55.2	56.03
KRH36488	Soybean	extracellular	53.96	54.91
KRH54508	Soybean	extracellular	44.8	54.35
KRH36487	Soybean	extracellular	38.12	54.04
KRH67761	Soybean	endoplasmic reticulum, extracellular, vacuole	61.63	52.98
KRH19954	Soybean	endoplasmic reticulum, extracellular, plasma membrane	61.14	51.78
KRH63402	Soybean	extracellular	55.69	51.72
KRH45851	Soybean	extracellular	55.94	50.11
KRH74782	Soybean	extracellular	55.2	49.78
KRH01130	Soybean	extracellular	54.21	49.77
KRH35994	Soybean	extracellular	61.63	49.4
KRG90767	Soybean	extracellular	60.89	49.0
KRH69345	Soybean	extracellular	53.71	48.55
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	52.97	48.31
KRG93502	Soybean	extracellular	52.72	48.08

Protein Annotations

KEGG:00040+4.2.2.2	EntrezGene:100810380	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A0R0EU75	EMBL:ACUP02011659
InterPro:AmbAllergen	EnsemblPlantsGene:GLYMA_19G053800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570
GO:GO:0045490	GO:GO:0046872	InterPro:IPR012334	EnsemblPlants:KRG93976	ProteinID:KRG93976	ProteinID:KRG93976.1
PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF29	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0001890BC0	SEG:seg

Description

hypothetical protein

Coordinates

chr19:-:8832961..8836400

Molecular Weight (calculated)

44634.6 Da

IEP (calculated)

7.248

GRAVY (calculated)

-0.321

Length

404 amino acids

Sequence
(BLAST)

001: MAPLSCIIVL FALSLLTPCF VSSSAVRDPE LVVQEVQRSI NASRRNLGYL SCGTGNPIDD CWRCESNWEN NRQRLADCAI GFGKDAIGGK NGRIYVVTDS
101: GDDDAVNPRP GTLRYAAIQD EPLWIIFKRD MVITLKEELL VNSFKTIDGR GASVHIANGG CITIHYVSNI IIHGIHIHDC KPTGNTNIRD SPHHSGFWTQ
201: SDGDGVSIFN SKHIWVDHCS LSNCRDGLID AIHGSTAITI SNNYMTHHDK VMLLGHSDSY TQDKDMQVTI AFNHFGEGLV QRMPRCRHGY FHVVNNDYTH
301: WEMYAIGGSA NPTINSQGNR FLAPNIRFSK EVTKHEDAPQ SEWMGWNWRS EGDMFLNGAY FRQSGAGASS SYARASSLSA RPSSLVGSMT TTAGALTCRK
401: GNRC

Best Arabidopsis Sequence Match ( AT3G27400.1 )
(BLAST)

001: MVSYSNNHFA YAFLLLLTIG NTLAFSSSLP DHVQDPNLVV DDVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWETNR QRLADCAIGF GKNAIGGRKG
101: RIYVVTDPAN DDPVNPRPGT LRYAVTQEEP LWIIFKRDMV IRLKKELIIT SFKTIDGRGS SVHITDGPCL KIHYATNIII HGINIHDCKP GSGGMIKDGP
201: HHTGWWMQSD GDAVAIFGGK HVWIDHCSLS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHSDSYTQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIYSQGNRFL APNTRFNKEV TKHEDAPESK WRDWNWRSEG DMLLNGAYFR ESGAEAPSTY ARASSLSARP SSLVGSITTT
401: AGTLSCRRGR RC

Arabidopsis Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.