Factsheet for VIT_14s0219g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g09810.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	84.62	84.62
KRG93976	Soybean	extracellular	83.62	83.42
KRH58231	Soybean	extracellular	83.37	83.17
Solyc02g093580.2.1	Tomato	endoplasmic reticulum, extracellular, vacuole	82.63	82.43
PGSC0003DMT400032910	Potato	endoplasmic reticulum, extracellular, vacuole	82.38	82.38
VIT_01s0137g00240.t01	Wine grape	extracellular	80.15	80.15
CDX83690	Canola	endoplasmic reticulum, extracellular, vacuole	77.67	75.97
Bra025274.1-P	Field mustard	extracellular	76.92	75.24
CDY03964	Canola	extracellular	76.18	74.51
CDY00156	Canola	extracellular, plastid	76.18	74.51
Bra039081.1-P	Field mustard	extracellular, plastid	76.18	74.51
CDY20049	Canola	plastid, vacuole	75.93	74.27
Bra033008.1-P	Field mustard	extracellular	72.7	73.62
AT3G27400.2	Thale cress	endoplasmic reticulum, vacuole	75.93	73.56
CDY34149	Canola	extracellular	65.01	72.98
VIT_05s0051g00590.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	71.22	66.74
VIT_07s0005g05520.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	70.97	64.27
VIT_19s0015g00510.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	58.81	58.96
VIT_17s0000g05740.t01	Wine grape	extracellular	56.82	53.38
VIT_10s0116g01160.t01	Wine grape	endoplasmic reticulum, extracellular	50.37	53.28
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	57.57	52.37
VIT_13s0019g04900.t01	Wine grape	extracellular	53.85	52.16
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	57.07	51.92
VIT_08s0007g04820.t01	Wine grape	plastid	62.78	51.74
VIT_13s0019g04910.t01	Wine grape	extracellular	63.28	51.41
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.83	51.25

Protein Annotations

KEGG:00040+4.2.2.2	EntrezGene:100233090	wikigene:100233090	Gene3D:2.160.20.10	MapMan:21.3.5.2	ProteinID:AAF63756
ProteinID:AAF63756.1	EMBL:AF243475	ProteinID:AFK32131	ProteinID:AFK32131.1	ProteinID:AFK32132	ProteinID:AFK32132.1
ProteinID:AFK32133	ProteinID:AFK32133.1	ProteinID:AFK32134	ProteinID:AFK32134.1	ProteinID:AFK32135	ProteinID:AFK32135.1
ProteinID:AFK32136	ProteinID:AFK32136.1	ProteinID:AFK32137	ProteinID:AFK32137.1	ProteinID:AFK32138	ProteinID:AFK32138.1
ProteinID:AFK32139	ProteinID:AFK32139.1	ProteinID:AFK32140	ProteinID:AFK32140.1	ProteinID:AFK32141	ProteinID:AFK32141.1
ProteinID:AFK32142	ProteinID:AFK32142.1	ProteinID:AFK32143	ProteinID:AFK32143.1	ProteinID:AFK32144	ProteinID:AFK32144.1
ProteinID:AFK32145	ProteinID:AFK32145.1	ProteinID:AFK32146	ProteinID:AFK32146.1	ProteinID:AFK32147	ProteinID:AFK32147.1
ProteinID:AFK32148	ProteinID:AFK32148.1	ProteinID:AFK32149	ProteinID:AFK32149.1	ProteinID:AFK32150	ProteinID:AFK32150.1
ProteinID:AFK32151	ProteinID:AFK32151.1	ProteinID:AFK32152	ProteinID:AFK32152.1	ProteinID:AFK32153	ProteinID:AFK32153.1
ProteinID:AFK32154	ProteinID:AFK32154.1	ProteinID:AFK32155	ProteinID:AFK32155.1	ProteinID:AFK32156	ProteinID:AFK32156.1
ProteinID:AFK32157	ProteinID:AFK32157.1	ProteinID:AFK32158	ProteinID:AFK32158.1	ProteinID:AFK32159	ProteinID:AFK32159.1
ProteinID:AFK32160	ProteinID:AFK32160.1	ProteinID:AFK32161	ProteinID:AFK32161.1	ProteinID:AFK32162	ProteinID:AFK32162.1
ProteinID:AFK32163	ProteinID:AFK32163.1	ProteinID:AFK32164	ProteinID:AFK32164.1	ProteinID:AFK32165	ProteinID:AFK32165.1
ProteinID:AFK32166	ProteinID:AFK32166.1	ProteinID:AFK32167	ProteinID:AFK32167.1	ProteinID:AFK32168	ProteinID:AFK32168.1
ProteinID:AFK32169	ProteinID:AFK32169.1	ProteinID:AFK32170	ProteinID:AFK32170.1	ProteinID:AFK32171	ProteinID:AFK32171.1
ProteinID:AFK32172	ProteinID:AFK32172.1	ProteinID:AFK32173	ProteinID:AFK32173.1	ProteinID:AFK32174	ProteinID:AFK32174.1
ProteinID:AFK32175	ProteinID:AFK32175.1	ProteinID:AFK32176	ProteinID:AFK32176.1	ProteinID:AFK32177	ProteinID:AFK32177.1
ProteinID:AFK32178	ProteinID:AFK32178.1	ProteinID:AFK32179	ProteinID:AFK32179.1	ProteinID:AFK32180	ProteinID:AFK32180.1
ProteinID:AFK32181	ProteinID:AFK32181.1	ProteinID:AFK32182	ProteinID:AFK32182.1	ProteinID:AFK32183	ProteinID:AFK32183.1
ProteinID:AFK32184	ProteinID:AFK32184.1	ProteinID:AFK32185	ProteinID:AFK32185.1	ProteinID:AFK32186	ProteinID:AFK32186.1
ProteinID:AFK32187	ProteinID:AFK32187.1	ProteinID:AFK32188	ProteinID:AFK32188.1	ProteinID:AFK32189	ProteinID:AFK32189.1
ProteinID:AFK32190	ProteinID:AFK32190.1	ProteinID:AFK32191	ProteinID:AFK32191.1	ProteinID:AFK32192	ProteinID:AFK32192.1
ProteinID:AFK32193	ProteinID:AFK32193.1	ProteinID:AFK32194	ProteinID:AFK32194.1	ProteinID:AFK32195	ProteinID:AFK32195.1
ProteinID:AFK32196	ProteinID:AFK32196.1	ProteinID:AFK32197	ProteinID:AFK32197.1	ProteinID:AFK32198	ProteinID:AFK32198.1
ProteinID:AFK32199	ProteinID:AFK32199.1	ProteinID:AFK32200	ProteinID:AFK32200.1	ProteinID:AFK32201	ProteinID:AFK32201.1
ProteinID:AFK32202	ProteinID:AFK32202.1	ProteinID:AFK32203	ProteinID:AFK32203.1	ProteinID:AFK32204	ProteinID:AFK32204.1
ProteinID:AFK32205	ProteinID:AFK32205.1	ProteinID:AFK32206	ProteinID:AFK32206.1	ProteinID:AFK32207	ProteinID:AFK32207.1
ProteinID:AFK32208	ProteinID:AFK32208.1	ProteinID:AFK32209	ProteinID:AFK32209.1	ProteinID:AFK32210	ProteinID:AFK32210.1
ProteinID:AFK32211	ProteinID:AFK32211.1	ProteinID:AFK32212	ProteinID:AFK32212.1	ProteinID:AFK32213	ProteinID:AFK32213.1
ProteinID:AFK32214	ProteinID:AFK32214.1	ProteinID:AFK32215	ProteinID:AFK32215.1	ProteinID:AFK32216	ProteinID:AFK32216.1
ProteinID:AFK32217	ProteinID:AFK32217.1	ProteinID:AFK32218	ProteinID:AFK32218.1	ProteinID:AFK32219	ProteinID:AFK32219.1
ProteinID:AFK32220	ProteinID:AFK32220.1	ProteinID:AFK32221	ProteinID:AFK32221.1	ProteinID:AFK32222	ProteinID:AFK32222.1
ProteinID:AFK32223	ProteinID:AFK32223.1	ProteinID:AFK32224	ProteinID:AFK32224.1	ProteinID:AFK32225	ProteinID:AFK32225.1
ProteinID:AFK32226	ProteinID:AFK32226.1	InterPro:AmbAllergen	ProteinID:CCB44553	ProteinID:CCB44553.1	UniProt:F6GX67
EMBL:FN594962	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	EMBL:JQ743924	EMBL:JQ743925	EMBL:JQ743926	EMBL:JQ743927
EMBL:JQ743928	EMBL:JQ743929	EMBL:JQ743930	EMBL:JQ743931	EMBL:JQ743932	EMBL:JQ743933
EMBL:JQ743934	EMBL:JQ743935	EMBL:JQ743936	EMBL:JQ743937	EMBL:JQ743938	EMBL:JQ743939
EMBL:JQ743940	EMBL:JQ743941	EMBL:JQ743942	EMBL:JQ743943	EMBL:JQ743944	EMBL:JQ743945
EMBL:JQ743946	EMBL:JQ743947	EMBL:JQ743948	EMBL:JQ743949	EMBL:JQ743950	EMBL:JQ743951
EMBL:JQ743952	EMBL:JQ743953	EMBL:JQ743954	EMBL:JQ743955	EMBL:JQ743956	EMBL:JQ743957
EMBL:JQ743958	EMBL:JQ743959	EMBL:JQ743960	EMBL:JQ743961	EMBL:JQ743962	EMBL:JQ743963
EMBL:JQ743964	EMBL:JQ743965	EMBL:JQ743966	EMBL:JQ743967	EMBL:JQ743968	EMBL:JQ743969
EMBL:JQ743970	EMBL:JQ743971	EMBL:JQ743972	EMBL:JQ743973	EMBL:JQ743974	EMBL:JQ743975
EMBL:JQ743976	EMBL:JQ743977	EMBL:JQ743978	EMBL:JQ743979	EMBL:JQ743980	EMBL:JQ743981
EMBL:JQ743982	EMBL:JQ743983	EMBL:JQ743984	EMBL:JQ743985	EMBL:JQ743986	EMBL:JQ743987
EMBL:JQ743988	EMBL:JQ743989	EMBL:JQ743990	EMBL:JQ743991	EMBL:JQ743992	EMBL:JQ743993
EMBL:JQ743994	EMBL:JQ743995	EMBL:JQ743996	EMBL:JQ743997	EMBL:JQ743998	EMBL:JQ743999
EMBL:JQ744000	EMBL:JQ744001	EMBL:JQ744002	EMBL:JQ744003	EMBL:JQ744004	EMBL:JQ744005
EMBL:JQ744006	EMBL:JQ744007	EMBL:JQ744008	EMBL:JQ744009	EMBL:JQ744010	EMBL:JQ744011
EMBL:JQ744012	EMBL:JQ744013	EMBL:JQ744014	EMBL:JQ744015	EMBL:JQ744016	EMBL:JQ744017
EMBL:JQ744018	EMBL:JQ744019	EntrezGene:PEL	wikigene:PEL	PFAM:PF00544	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF29	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00656
SUPFAM:SSF51126	SignalP:SignalP-noTM	TIGR:TC62787	UniParc:UPI00015C9AAC	ArrayExpress:VIT_14s0219g00230	EnsemblPlantsGene:VIT_14s0219g00230
EnsemblPlants:VIT_14s0219g00230.t01	unigene:Vvi.84	SEG:seg	:	:	:

Description

Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F6GX67]

Coordinates

chr14:+:26481825..26483236

Molecular Weight (calculated)

44443.5 Da

IEP (calculated)

7.342

GRAVY (calculated)

-0.325

Length

403 amino acids

Sequence
(BLAST)

001: MATFAMSLLF LFSLLPPILG SSAPVQDPEV VVQEVHRSIN ASRRNLGYFS CGTGNPIDDC WRCDANWDKN RQRLADCAIG FGKDAMGGKN GRIYVVTDSE
101: DDDPVNPRPG TLRHAVIQDE PLWIIFKRDM VIKLKQELVM NSFKTIDGRG ASVHIAGGPC ITIHYASNII IHGLHIHDCK QGGNANIRNS PHHSGWWTVS
201: DGDGVSIFGG RHIWVDHCSL SNCHDGLIDA IHGSTAITIS NNFMTHHDKV MLLGHSDSYT EDKNMQVTIA FNHFGEGLVQ RMPRCRHGYF HVVNNDYTHW
301: EMYAIGGSAD PTINSQGNRF LAPNDRFKKA VTKHEDAPES EWRHWNWRSE GDLMLNGAFF LQSAAGASSS YARASSLSAR PSSLVGSITL GSGALGCRKG
401: SRC

Best Arabidopsis Sequence Match ( AT5G63180.1 )
(BLAST)

001: MFRPNSLLIP SNLSTTKSQR NTMLNSSYLS FALIFFCCIL FSALASSLPV SDPELVVEEV HRKINESISR RKLGFFSCGS GNPIDDCWRC DKDWEKNRKR
101: LADCGIGFGK NAIGGRDGEI YVVTDPGNDD PVNPRPGTLR YAVIQDEPLW IIFKRDMTIQ LKEELIMNSF KTLDGRGASV HISGGPCITI QYVTNIIIHG
201: LHIHDCKQGG NTYVRDSPEH YGYRTVSDGD GVSIFGGSHV WVDHCSLSNC NDGLIDAIRG STAITISNNY LTHHNKVMLL GHSDTYEQDK NMQVTIAFNH
301: FGEGLVQRMP RCRHGYFHVV NNDYTHWEMY AIGGSANPTI NSQGNRFLAP DDSSSKEVTK HEDAPEDEWR NWNWRSEGDL LLNGAFFTYS GAGPAKSSSY
401: SKASSLAARP SSHVGEITIA SGALSCKRGS HC

Arabidopsis Description

Probable pectate lyase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z25]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.