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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033008.1-P Field mustard extracellular 94.99 85.68
CDY03964 Canola extracellular 94.71 82.52
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 92.76 80.83
AT3G27400.2 Thale cress endoplasmic reticulum, vacuole 90.53 78.12
CDY00156 Canola extracellular, plastid 88.86 77.43
CDY20049 Canola plastid, vacuole 88.86 77.43
CDY18330 Canola cytosol 30.92 76.03
Solyc02g093580.2.1 Tomato endoplasmic reticulum, extracellular, vacuole 73.54 65.35
KRG93976 Soybean extracellular 73.26 65.1
KRH58231 Soybean extracellular 73.26 65.1
PGSC0003DMT400032910 Potato endoplasmic reticulum, extracellular, vacuole 72.98 65.01
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 72.98 65.01
CDY08948 Canola endoplasmic reticulum, extracellular 70.47 62.32
CDY24847 Canola endoplasmic reticulum, extracellular 70.19 62.07
CDY34310 Canola endoplasmic reticulum, vacuole 69.92 61.82
CDY03419 Canola endoplasmic reticulum, extracellular 69.36 61.33
CDY28857 Canola extracellular 69.36 61.18
CDY56520 Canola extracellular 69.36 61.18
CDX92652 Canola endoplasmic reticulum, extracellular 69.08 61.08
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 69.08 61.08
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 68.8 60.84
CDY11033 Canola endoplasmic reticulum, extracellular 68.8 60.84
CDY12666 Canola extracellular 68.25 60.34
CDY32557 Canola extracellular 67.97 60.1
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 68.25 59.32
CDY48132 Canola endoplasmic reticulum, golgi 67.69 56.78
CDY16732 Canola endoplasmic reticulum, golgi 67.41 56.54
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 63.51 54.81
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 63.23 54.57
CDY65626 Canola golgi 68.25 53.96
CDY19932 Canola extracellular 61.84 53.11
CDY70583 Canola cytosol 35.93 53.09
CDY05655 Canola extracellular 61.56 53.0
CDY33938 Canola extracellular 61.56 53.0
CDY56668 Canola extracellular 61.56 52.87
CDX89799 Canola extracellular 61.28 51.04
CDY61137 Canola extracellular 61.0 50.81
CDY01119 Canola endoplasmic reticulum, extracellular 61.28 50.57
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 60.45 50.35
CDY47327 Canola endoplasmic reticulum, extracellular 60.72 50.35
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 60.17 50.12
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 62.67 49.45
CDY46471 Canola endoplasmic reticulum, extracellular 60.17 49.2
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 61.84 49.12
CDY18738 Canola endoplasmic reticulum, extracellular 62.95 47.48
CDY66697 Canola endoplasmic reticulum, golgi 57.94 46.53
CDX77470 Canola golgi, plasma membrane 59.05 46.19
CDY30040 Canola extracellular 45.4 45.79
CDX98092 Canola extracellular 45.13 45.51
CDY06557 Canola extracellular 48.75 45.22
CDY20748 Canola extracellular 48.75 45.1
CDX98091 Canola extracellular 45.96 44.47
CDY30041 Canola extracellular 45.4 43.94
CDX77400 Canola endoplasmic reticulum, extracellular 59.61 43.5
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 38.44 42.2
CDX70244 Canola vacuole 51.25 41.72
CDX79122 Canola extracellular 45.4 40.65
CDX78152 Canola extracellular 52.65 39.71
CDX74293 Canola endoplasmic reticulum, extracellular 52.09 39.7
CDX91953 Canola endoplasmic reticulum, extracellular 52.09 39.7
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 51.81 39.66
CDY27438 Canola extracellular 44.85 39.46
CDX73573 Canola extracellular 52.09 39.29
CDX76388 Canola extracellular 44.57 39.22
CDX67560 Canola plasma membrane 52.37 38.37
CDY17432 Canola extracellular 49.03 38.34
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.75 38.21
CDY03043 Canola extracellular 48.75 38.13
CDX70590 Canola endoplasmic reticulum, extracellular 50.42 38.11
CDX78607 Canola endoplasmic reticulum, extracellular 50.42 38.11
CDY41679 Canola endoplasmic reticulum, plasma membrane 48.47 38.07
CDX85564 Canola extracellular 50.14 38.05
CDY09356 Canola extracellular 48.19 37.86
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 48.19 37.77
CDY04133 Canola extracellular 48.19 37.69
CDY45202 Canola extracellular 48.19 37.69
CDY11284 Canola extracellular, golgi 53.48 37.65
CDY45254 Canola endoplasmic reticulum 47.91 37.55
CDY39314 Canola extracellular 47.91 37.47
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 51.25 37.4
CDY63769 Canola extracellular 49.86 37.37
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 50.97 37.27
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 50.7 36.99
CDY58428 Canola endoplasmic reticulum, golgi, plastid 52.92 36.89
CDX69550 Canola endoplasmic reticulum, extracellular 49.86 35.87
CDY41382 Canola endoplasmic reticulum, golgi 52.65 35.86
CDY66593 Canola endoplasmic reticulum, extracellular 49.58 35.67
CDY53552 Canola extracellular 49.03 35.56
CDX81636 Canola endoplasmic reticulum 47.91 35.54
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 50.7 35.2
CDY13312 Canola plasma membrane 51.81 34.7
CDY70492 Canola endoplasmic reticulum, extracellular 1.11 7.27
CDX81635 Canola mitochondrion, nucleus 0.56 1.32
CDX96858 Canola mitochondrion, nucleus 0.56 1.32
CDY04136 Canola mitochondrion, nucleus 0.56 1.32
CDY09355 Canola mitochondrion, nucleus 0.56 1.32
CDY41678 Canola mitochondrion, nucleus 0.56 1.32
CDY45199 Canola mitochondrion, nucleus 0.56 1.32
CDY45253 Canola mitochondrion, nucleus 0.56 1.32
CDY53553 Canola mitochondrion, nucleus 0.56 1.32
CDY66531 Canola mitochondrion, nucleus 0.56 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:50.4.2GO:A0A078H9I0UniProt:A0A078H9I0InterPro:AmbAllergen
EnsemblPlants:CDY34149ProteinID:CDY34149ProteinID:CDY34149.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00056123001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF29InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EEF3BESEG:seg
Description
BnaA02g28910DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078H9I0]
Coordinates
chrLK032330:-:19832..22637
Molecular Weight (calculated)
40223.5 Da
IEP (calculated)
9.402
GRAVY (calculated)
-0.480
Length
359 amino acids
Sequence
(BLAST)
001: MISYSNNPFV YTLIFLLSIG NTIAFSSSSS PHTQDPNLVV DEVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWETNR QRLADCAIGF GKHAIGGRGG
101: RIYVVTDPAN DDPVSPRQGT LRHAVTQEEP LWIIFKRDMV IRLKKELIIT SFKTIDGRGS SVHITDGPCI KIHYATNIII HGINIHDCKP GSAGMIRDGP
201: RHTGWWIKSD GDADNTQDKN MQVTIAFNHF GEGLVQRMPR CRHGYFHVVN NDYTHWEMYA IGGSASPTIF SQGNRFLAPN TRFNKEVTKH EDAPESKWRH
301: WNWRSEGDIM LNGAYFRQSG ARASSTYARA SSLSARPSSL VGSITTTAGT LSCRRGRRC
Best Arabidopsis Sequence Match ( AT3G27400.1 )
(BLAST)
001: MVSYSNNHFA YAFLLLLTIG NTLAFSSSLP DHVQDPNLVV DDVNRSVFNA SRRSLAYLSC RTGNPIDDCW RCDPNWETNR QRLADCAIGF GKNAIGGRKG
101: RIYVVTDPAN DDPVNPRPGT LRYAVTQEEP LWIIFKRDMV IRLKKELIIT SFKTIDGRGS SVHITDGPCL KIHYATNIII HGINIHDCKP GSGGMIKDGP
201: HHTGWWMQSD GDAVAIFGGK HVWIDHCSLS NCDDGLIDAI HGSTAITISN NHMTHHDKVM LLGHSDSYTQ DKNMQVTIAF NHFGEGLVQR MPRCRHGYFH
301: VVNNDYTHWE MYAIGGSASP TIYSQGNRFL APNTRFNKEV TKHEDAPESK WRDWNWRSEG DMLLNGAYFR ESGAEAPSTY ARASSLSARP SSLVGSITTT
401: AGTLSCRRGR RC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNU6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.