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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028549.1-P Field mustard plasma membrane 99.18 99.18
CDX78152 Canola extracellular 89.18 91.81
CDX73573 Canola extracellular 88.78 91.39
AT3G53190.1 Thale cress extracellular 90.0 91.3
CDY13312 Canola plasma membrane 97.14 88.81
KRH67761 Soybean endoplasmic reticulum, extracellular, vacuole 70.61 73.62
PGSC0003DMT400009869 Potato cytosol 60.61 69.72
VIT_08s0007g04820.t01 Wine grape plastid 69.39 69.53
KRH19954 Soybean endoplasmic reticulum, extracellular, plasma membrane 67.35 69.18
Solyc09g008380.2.1 Tomato nucleus 66.73 67.7
CDY18330 Canola cytosol 18.16 60.96
CDY70583 Canola cytosol 30.0 60.49
CDY03419 Canola endoplasmic reticulum, extracellular 49.59 59.85
CDY24847 Canola endoplasmic reticulum, extracellular 49.59 59.85
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 50.41 59.81
CDY08948 Canola endoplasmic reticulum, extracellular 49.39 59.61
CDY34310 Canola endoplasmic reticulum, vacuole 49.39 59.61
CDX92652 Canola endoplasmic reticulum, extracellular 49.18 59.36
CDY11033 Canola endoplasmic reticulum, extracellular 49.18 59.36
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 50.2 59.13
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 50.2 59.13
CDY28857 Canola extracellular 48.98 58.97
CDY56520 Canola extracellular 48.98 58.97
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 48.57 58.62
CDY12666 Canola extracellular 48.37 58.37
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 48.37 58.37
CDY33938 Canola extracellular 49.59 58.27
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 51.22 58.24
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 51.22 58.24
CDY32557 Canola extracellular 48.16 58.13
CDY05655 Canola extracellular 49.39 58.03
CDY16732 Canola endoplasmic reticulum, golgi 50.61 57.94
TraesCS1B01G161000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 56.12 57.77
CDX89799 Canola extracellular 50.82 57.77
CDY48132 Canola endoplasmic reticulum, golgi 50.41 57.71
CDY19932 Canola extracellular 49.18 57.66
CDY56668 Canola extracellular 49.18 57.66
CDY61137 Canola extracellular 50.61 57.54
TraesCS1D01G142400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 56.12 57.53
TraesCS1A01G143600.1 Wheat extracellular 56.33 57.5
CDX70244 Canola vacuole 51.43 57.14
CDY01119 Canola endoplasmic reticulum, extracellular 50.41 56.78
KXG38421 Sorghum extracellular 55.71 56.64
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 56.73 56.62
CDY47327 Canola endoplasmic reticulum, extracellular 50.0 56.58
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 56.73 56.5
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 47.35 56.31
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 51.84 56.19
Zm00001d032806_P001 Maize cytosol, plastid 49.18 55.79
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 51.63 55.6
GSMUA_Achr4P25120_001 Banana extracellular 50.61 55.48
CDY46471 Canola endoplasmic reticulum, extracellular 49.59 55.35
Os10t0457200-01 Rice plasma membrane 55.31 55.19
CDY00156 Canola extracellular, plastid 46.33 55.1
CDY20049 Canola plastid, vacuole 46.33 55.1
HORVU1Hr1G038220.7 Barley endoplasmic reticulum, extracellular 54.49 54.83
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 54.49 54.27
CDY65626 Canola golgi 50.2 54.19
CDY66697 Canola endoplasmic reticulum, golgi 49.39 54.14
CDY03964 Canola extracellular 45.31 53.88
CDY18738 Canola endoplasmic reticulum, extracellular 52.04 53.57
CDX77470 Canola golgi, plasma membrane 49.8 53.16
CDY34149 Canola extracellular 38.37 52.37
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 55.1 52.22
CDY06557 Canola extracellular 41.02 51.94
CDY20748 Canola extracellular 41.02 51.8
CDY11284 Canola extracellular, golgi 53.88 51.76
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 34.08 51.07
CDY41382 Canola endoplasmic reticulum, golgi 54.9 51.04
CDY58428 Canola endoplasmic reticulum, golgi, plastid 53.06 50.49
CDY30040 Canola extracellular 36.53 50.28
CDX98092 Canola extracellular 36.33 50.0
CDX77400 Canola endoplasmic reticulum, extracellular 50.0 49.8
GSMUA_Achr1P03320_001 Banana plasma membrane 51.43 49.32
CDX98091 Canola extracellular 37.14 49.06
CDY30041 Canola extracellular 36.73 48.52
CDX79122 Canola extracellular 38.16 46.63
CDY27438 Canola extracellular 38.37 46.08
CDX76388 Canola extracellular 37.96 45.59
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 41.84 44.76
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 41.84 44.76
CDY03043 Canola extracellular 41.43 44.23
CDY17432 Canola extracellular 41.43 44.23
CDY04133 Canola extracellular 41.22 44.01
CDY45202 Canola extracellular 41.22 44.01
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 42.04 43.92
CDY45254 Canola endoplasmic reticulum 40.82 43.67
CDY41679 Canola endoplasmic reticulum, plasma membrane 40.41 43.33
CDX74293 Canola endoplasmic reticulum, extracellular 41.63 43.31
CDX91953 Canola endoplasmic reticulum, extracellular 41.63 43.31
CDY39314 Canola extracellular 40.41 43.14
CDY09356 Canola extracellular 40.2 43.11
CDX81636 Canola endoplasmic reticulum 42.45 42.98
CDX70590 Canola endoplasmic reticulum, extracellular 41.63 42.95
CDX78607 Canola endoplasmic reticulum, extracellular 41.43 42.74
CDX85564 Canola extracellular 40.82 42.28
CDY53552 Canola extracellular 42.65 42.22
CDY63769 Canola extracellular 41.22 42.17
CDX69550 Canola endoplasmic reticulum, extracellular 42.04 41.28
CDY66593 Canola endoplasmic reticulum, extracellular 42.04 41.28
CDY70492 Canola endoplasmic reticulum, extracellular 1.63 14.55
CDX81635 Canola mitochondrion, nucleus 1.02 3.29
CDX96858 Canola mitochondrion, nucleus 1.02 3.29
CDY04136 Canola mitochondrion, nucleus 1.02 3.29
CDY09355 Canola mitochondrion, nucleus 1.02 3.29
CDY41678 Canola mitochondrion, nucleus 1.02 3.29
CDY45199 Canola mitochondrion, nucleus 1.02 3.29
CDY45253 Canola mitochondrion, nucleus 1.02 3.29
CDY53553 Canola mitochondrion, nucleus 1.02 3.29
CDY66531 Canola mitochondrion, nucleus 1.02 3.29
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078BSJ1InterPro:AmbAllergenEnsemblPlants:CDX67560
ProteinID:CDX67560ProteinID:CDX67560.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00098693001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF21InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EED3A8SEG:seg:
Description
BnaA07g16000D
Coordinates
chrLK031787:+:933666..937592
Molecular Weight (calculated)
54367.5 Da
IEP (calculated)
6.648
GRAVY (calculated)
-0.259
Length
490 amino acids
Sequence
(BLAST)
001: MMLQRSCIVL FLSLSLFVPY MSLAMLNKTL LLLPHPDPEL VAHDVHRRVN ASLSRRQAMD TTDQTGSNPC FTGNPIDDCW KCDPNWPNNR QGLADCGIGF
101: GQYALGGKGG RFYFVTDSSD DDAVEPKPGT LRYGVIQVEP LWIVFPSNMM IKLKQELIFN SYKTLDGRGA NVHIVGGGCI TLQYISNVII HNIHIHHCYQ
201: SGNTNVRSSP THYGFRTKSD GDGISIFGSK DIWIDHCSLS RCKDGLIDAV MGSTGITISN NFFSHHNEVM LLGHSDHYEP DSGMQVTIAF NHFGEKLIQR
301: MPRCRRGYIH VVNNDFTQWE MYAIGGSGNP TINSQGNRFT APSNPFAKEV TKRVETPDGE WKGWNWRSEG DILVNGAFFV ASGEGAEMRY EKAYSIEPKS
401: ASFIDQITFH SGVLGVGGRN NNLGMWTTTG SEGNGGLDSY NDYTDEMSGT GSTNRLSFSV IVLAFMLNLL SYLVIFTSSP QMFSFQPKCS
Best Arabidopsis Sequence Match ( AT3G53190.1 )
(BLAST)
001: MMLQRSCIVL FFSLFLLVPQ MVFSMLNRTL LLIPHPDPEL VAYQVQWKVN ASITRRQALD TTDQAGSTPC ITGNPIDDCW KCDPNWPNNR QGLADCGIGF
101: GQYALGGKGG QFYFVTDSSD DDAVNPKPGT LRYGVIQEEP LWIVFPSNMM IKLKQELIFN SYKTLDGRGA NVHIVGGGCI TLQYVSNIII HNIHIHHCYQ
201: SGNTNVRSSP THYGFRTKSD GDGISIFGSK DIWIDHCSLS RCKDGLIDAV MGSTGITISN NFFSHHNEVM LLGHSDHYEP DSGMQVTIAF NHFGEKLIQR
301: MPRCRRGYIH VVNNDFTQWE MYAIGGSGNP TINSQGNRYT APTNPFAKEV TKRVETPDGD WKGWNWRSEG DILVNGAFFV ASGEGAEMRY EKAYSVEPKS
401: ASFITQITFH SGVLGVGGRN NNLGMWTTTG SEGTSGLDSY NDYTDEMSGA GSTNRLSFSV LVFLLSSISY LVVFTSSTQM FML
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q56XU8]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.