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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18330 Canola cytosol 41.98 69.86
CDY28857 Canola extracellular 90.53 54.05
CDY56520 Canola extracellular 90.12 53.81
CDY12666 Canola extracellular 87.65 52.46
CDY32557 Canola extracellular 87.65 52.46
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 86.83 51.97
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 86.01 51.48
AT1G67750.1 Thale cress endoplasmic reticulum, vacuole 86.42 51.47
KRH31375 Soybean nucleus 80.66 48.76
KRG97506 Soybean endoplasmic reticulum, golgi 80.66 48.4
CDY08948 Canola endoplasmic reticulum, extracellular 76.95 46.06
CDY24847 Canola endoplasmic reticulum, extracellular 76.95 46.06
CDY34310 Canola endoplasmic reticulum, vacuole 76.54 45.81
CDY03419 Canola endoplasmic reticulum, extracellular 76.54 45.81
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 77.37 45.52
CDY11033 Canola endoplasmic reticulum, extracellular 75.72 45.32
CDX92652 Canola endoplasmic reticulum, extracellular 75.31 45.07
CDY48132 Canola endoplasmic reticulum, golgi 78.19 44.39
CDY16732 Canola endoplasmic reticulum, golgi 78.19 44.39
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 71.6 42.23
CDY65626 Canola golgi 78.19 41.85
CDY03964 Canola extracellular 70.78 41.75
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 71.19 41.59
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 71.19 41.59
CDY20049 Canola plastid, vacuole 70.37 41.5
CDY00156 Canola extracellular, plastid 70.37 41.5
CDY33938 Canola extracellular 69.55 40.53
CDY05655 Canola extracellular 69.55 40.53
CDY19932 Canola extracellular 69.55 40.43
CDY56668 Canola extracellular 69.55 40.43
CDY46471 Canola endoplasmic reticulum, extracellular 72.02 39.86
CDY47327 Canola endoplasmic reticulum, extracellular 69.96 39.26
CDY01119 Canola endoplasmic reticulum, extracellular 69.55 38.85
CDX89799 Canola extracellular 68.31 38.52
CDY61137 Canola extracellular 67.9 38.28
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 66.67 37.59
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 66.67 37.59
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 50.21 37.31
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 69.14 37.17
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 69.14 36.92
CDY34149 Canola extracellular 53.09 35.93
CDX77400 Canola endoplasmic reticulum, extracellular 72.43 35.77
CDY18738 Canola endoplasmic reticulum, extracellular 69.14 35.29
CDY66697 Canola endoplasmic reticulum, golgi 63.37 34.45
CDX98091 Canola extracellular 51.85 33.96
CDX77470 Canola golgi, plasma membrane 63.79 33.77
CDY30041 Canola extracellular 51.03 33.42
CDX98092 Canola extracellular 48.56 33.15
CDY30040 Canola extracellular 48.56 33.15
CDX79122 Canola extracellular 53.91 32.67
CDY27438 Canola extracellular 54.73 32.6
CDX76388 Canola extracellular 54.32 32.35
CDY06557 Canola extracellular 51.44 32.3
CDY20748 Canola extracellular 51.44 32.22
CDX78152 Canola extracellular 60.91 31.09
CDX73573 Canola extracellular 60.91 31.09
CDX67560 Canola plasma membrane 60.49 30.0
CDX70244 Canola vacuole 53.91 29.71
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 59.26 29.27
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 58.85 29.12
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 55.14 28.57
CDY17432 Canola extracellular 53.91 28.54
CDY04133 Canola extracellular 53.5 28.32
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 56.79 28.05
CDX91953 Canola endoplasmic reticulum, extracellular 54.32 28.03
CDX74293 Canola endoplasmic reticulum, extracellular 54.32 28.03
CDX70590 Canola endoplasmic reticulum, extracellular 54.73 28.0
CDX78607 Canola endoplasmic reticulum, extracellular 54.32 27.79
CDY41679 Canola endoplasmic reticulum, plasma membrane 51.85 27.57
CDX85564 Canola extracellular 53.5 27.48
CDY09356 Canola extracellular 51.44 27.35
CDY63769 Canola extracellular 53.91 27.35
CDY45202 Canola extracellular 51.44 27.23
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.61 27.08
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.03 27.07
CDY03043 Canola extracellular 51.03 27.02
CDY11284 Canola extracellular, golgi 56.38 26.86
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.62 26.86
CDY45254 Canola endoplasmic reticulum 50.21 26.64
CDY13312 Canola plasma membrane 58.44 26.49
CDY58428 Canola endoplasmic reticulum, golgi, plastid 55.97 26.41
CDY39314 Canola extracellular 49.79 26.36
CDX69550 Canola endoplasmic reticulum, extracellular 53.5 26.05
CDY66593 Canola endoplasmic reticulum, extracellular 53.5 26.05
CDX81636 Canola endoplasmic reticulum 51.44 25.83
CDY41382 Canola endoplasmic reticulum, golgi 55.97 25.81
CDY53552 Canola extracellular 51.03 25.05
CDY66531 Canola mitochondrion, nucleus 0.0 0.0
CDY70492 Canola endoplasmic reticulum, extracellular 0.0 0.0
CDY04136 Canola mitochondrion, nucleus 0.0 0.0
CDY53553 Canola mitochondrion, nucleus 0.0 0.0
CDY09355 Canola mitochondrion, nucleus 0.0 0.0
CDY45253 Canola mitochondrion, nucleus 0.0 0.0
CDY45199 Canola mitochondrion, nucleus 0.0 0.0
CDY41678 Canola mitochondrion, nucleus 0.0 0.0
CDX96858 Canola mitochondrion, nucleus 0.0 0.0
CDX81635 Canola mitochondrion, nucleus 0.0 0.0
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078JSI3UniProt:A0A078JSI3InterPro:AmbAllergen
EnsemblPlants:CDY70583ProteinID:CDY70583ProteinID:CDY70583.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00004601001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PFscan:PS51257PANTHER:PTHR31683PANTHER:PTHR31683:SF28InterPro:Pec_lyaseInterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126UniPathway:UPA00545UniParc:UPI0004EE960D:
Description
BnaCnng68920DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JSI3]
Coordinates
chrLK042597:+:1573..2541
Molecular Weight (calculated)
27466.5 Da
IEP (calculated)
7.662
GRAVY (calculated)
-0.379
Length
243 amino acids
Sequence
(BLAST)
001: MVIKLKEELM MNSFKTIDGR GASVHIAGGA CITVQYVTNI IIHGINIHDC KKRGNAYVRD SPSHYGWSTA SDGDAVTIFG GSHVWVDHCS LSNCDDGLVD
101: AIRGSTAITI SNNYLTHHNK VMLLGHSDSY TRDKNMQVTI AFNHFGEGLV QKMPTCRHGY FHVVNNDYTH WQMYAIGGSA APTINSQGNR FLAPNDHVFK
201: EVTKYEDAPQ SKWLNWNWRS EEPLQAMQKL QVCQLDRPRW WLL
Best Arabidopsis Sequence Match ( AT1G67750.1 )
(BLAST)
001: MRMTLVHLSL SLFSCLLLVL SPTFIASTPV SEPELVVQEV NEKINASRRN LGVLSCGTGN PIDDCWRCDP KWEKNRQRLA DCAIGFGKHA IGGRDGKIYV
101: VTDSSDKDVV NPKPGTLRHA VIQDEPLWII FARDMVIKLK EELIMNSFKT IDGRGASVHI AGGACITVQY VTNIIIHGVN IHDCKRKGNA YVRDSPSHYG
201: WRTASDGDAV SIFGGSHVWV DHCSLSNCAD GLIDAIHGST AITISNNYLS HHNKVMLLGH SDSYTRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWQMYAI GGSAAPTINS QGNRFLAPND HVFKEVTKYE DAPRSKWKKW NWRSEGDLFL NGAFFTPSGG GASSSYAKAS SLSARPSSLV ASVTSNAGAL
401: FCRKGSRC
Arabidopsis Description
Probable pectate lyase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXD8]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.