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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003200.1-P Field mustard endoplasmic reticulum, extracellular 97.56 97.76
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 96.75 96.94
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 85.98 85.98
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 86.79 82.59
AT3G54920.1 Thale cress extracellular 82.11 80.64
Solyc11g008140.1.1 Tomato plasma membrane 60.37 66.15
PGSC0003DMT400079776 Potato plasma membrane 65.04 65.31
HORVU5Hr1G005000.2 Barley cytosol 44.72 64.52
CDY18330 Canola cytosol 18.9 63.7
CDX70244 Canola vacuole 56.3 62.81
VIT_13s0019g04910.t01 Wine grape extracellular 62.8 62.3
PGSC0003DMT400011046 Potato mitochondrion 36.38 61.51
KRG90767 Soybean extracellular 62.4 61.16
KRH35994 Soybean extracellular 61.38 59.92
CDY11284 Canola extracellular, golgi 61.59 59.41
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 48.98 59.36
CDY70583 Canola cytosol 29.27 59.26
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 60.57 59.13
CDY24847 Canola endoplasmic reticulum, extracellular 48.78 59.11
CDY34310 Canola endoplasmic reticulum, vacuole 48.78 59.11
CDY28857 Canola extracellular 48.78 58.97
CDY03419 Canola endoplasmic reticulum, extracellular 48.58 58.87
CDY11033 Canola endoplasmic reticulum, extracellular 48.58 58.87
CDY56520 Canola extracellular 48.58 58.72
Solyc05g055510.2.1 Tomato plasma membrane 58.94 58.7
CDX92652 Canola endoplasmic reticulum, extracellular 48.37 58.62
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 48.37 58.62
CDY08948 Canola endoplasmic reticulum, extracellular 48.37 58.62
CDY32557 Canola extracellular 48.37 58.62
CDX73573 Canola extracellular 56.5 58.4
CDY12666 Canola extracellular 48.17 58.37
CDY05655 Canola extracellular 49.39 58.27
CDY19932 Canola extracellular 49.19 57.89
CDY58428 Canola endoplasmic reticulum, golgi, plastid 60.57 57.86
CDY33938 Canola extracellular 48.98 57.79
CDX78152 Canola extracellular 55.89 57.77
CDY56668 Canola extracellular 48.98 57.66
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 48.37 57.63
CDY41382 Canola endoplasmic reticulum, golgi 60.98 56.93
CDX67560 Canola plasma membrane 56.5 56.73
CDX89799 Canola extracellular 49.59 56.61
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 47.56 56.25
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 47.56 56.25
CDY61137 Canola extracellular 48.98 55.92
CDY48132 Canola endoplasmic reticulum, golgi 48.58 55.84
CDY16732 Canola endoplasmic reticulum, golgi 48.37 55.61
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 46.54 55.58
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 48.37 55.22
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 48.17 54.99
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 36.38 54.74
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 50.0 54.42
CDY00156 Canola extracellular, plastid 45.33 54.13
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 50.0 54.07
CDY47327 Canola endoplasmic reticulum, extracellular 47.56 54.04
CDY01119 Canola endoplasmic reticulum, extracellular 47.76 54.02
CDY46471 Canola endoplasmic reticulum, extracellular 48.17 53.99
CDY20049 Canola plastid, vacuole 45.12 53.88
CDY03964 Canola extracellular 44.51 53.16
CDX98092 Canola extracellular 38.41 53.09
CDY30040 Canola extracellular 38.41 53.09
CDX98091 Canola extracellular 39.84 52.83
CDY30041 Canola extracellular 39.43 52.29
CDY65626 Canola golgi 48.17 52.2
CDY13312 Canola plasma membrane 56.71 52.05
CDY18738 Canola endoplasmic reticulum, extracellular 50.2 51.89
CDY34149 Canola extracellular 37.4 51.25
CDY66697 Canola endoplasmic reticulum, golgi 46.54 51.23
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 59.15 50.96
CDX77470 Canola golgi, plasma membrane 47.15 50.54
CDY20748 Canola extracellular 39.84 50.52
CDY06557 Canola extracellular 39.63 50.39
CDX79122 Canola extracellular 41.06 50.37
CDX76388 Canola extracellular 40.85 49.26
CDY27438 Canola extracellular 40.85 49.26
CDX77400 Canola endoplasmic reticulum, extracellular 48.78 48.78
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 42.28 45.41
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 42.28 45.41
CDY17432 Canola extracellular 42.07 45.1
CDY04133 Canola extracellular 41.87 44.88
CDY45254 Canola endoplasmic reticulum 40.85 43.89
CDY39314 Canola extracellular 40.65 43.57
CDX78607 Canola endoplasmic reticulum, extracellular 41.87 43.37
CDX70590 Canola endoplasmic reticulum, extracellular 41.67 43.16
CDY45202 Canola extracellular 40.24 43.14
CDY03043 Canola extracellular 40.04 42.92
CDY09356 Canola extracellular 39.43 42.45
CDY41679 Canola endoplasmic reticulum, plasma membrane 39.43 42.45
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 40.45 42.43
CDX74293 Canola endoplasmic reticulum, extracellular 40.24 42.04
CDX91953 Canola endoplasmic reticulum, extracellular 40.24 42.04
CDX85564 Canola extracellular 40.24 41.86
CDY63769 Canola extracellular 40.65 41.75
CDX81636 Canola endoplasmic reticulum 41.06 41.74
CDY53552 Canola extracellular 41.46 41.21
CDX69550 Canola endoplasmic reticulum, extracellular 40.85 40.28
CDY66593 Canola endoplasmic reticulum, extracellular 40.85 40.28
CDY70492 Canola endoplasmic reticulum, extracellular 1.63 14.55
CDX81635 Canola mitochondrion, nucleus 1.83 5.92
CDX96858 Canola mitochondrion, nucleus 1.83 5.92
CDY04136 Canola mitochondrion, nucleus 1.83 5.92
CDY09355 Canola mitochondrion, nucleus 1.83 5.92
CDY41678 Canola mitochondrion, nucleus 1.83 5.92
CDY45199 Canola mitochondrion, nucleus 1.83 5.92
CDY45253 Canola mitochondrion, nucleus 1.83 5.92
CDY53553 Canola mitochondrion, nucleus 1.83 5.92
CDY66531 Canola mitochondrion, nucleus 1.83 5.92
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078EZL5UniProt:A0A078EZL5InterPro:AmbAllergen
EnsemblPlants:CDY07515ProteinID:CDY07515ProteinID:CDY07515.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00124552001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF11
InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTM
TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEE09ESEG:seg::
Description
BnaC06g15490DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078EZL5]
Coordinates
chrLK031979:-:233010..238834
Molecular Weight (calculated)
52972.5 Da
IEP (calculated)
6.780
GRAVY (calculated)
-0.194
Length
492 amino acids
Sequence
(BLAST)
001: MPPPHLSISI LLLCLFFFTL LEATKPLNLT LTLPHQHPSP DSVALHVTRT INASLSRRQL TSSSTCGTGN PIDDCWRCDS SDWSSNRQRL ADCSIGFGSG
101: TLGGKNGRIY VVTDSSDNNP ANPTPGTLRY AVIQEEPLWI VFSSSMFIRL KQELIINSYK TIDGRGAAVH ITGNGCLTIQ YVQHVIIHNI HIYDCKPSGG
201: AVVAASPTKV GRRGRSDGDG ISIFGSQKIW VDHCSLSHCT DGLIDVVLGS TAITISNNYF THHDEVMLLG HDDKYVLDTG MQVTIAFNHF GQGLVQRMPR
301: CRRGYIHVVN NDFTSWKMYA IGGSGNPTIN SQGNRYSAPS DPSAKEVTKR VDSTDDGEWA NWNWRTEGDL MENGAFFVAS GEGVSTLYSK ASSVEPKAAA
401: LVDQLTQNAG VFGGPSRDDQ GQSGDSYSGY GGGGDGGTGA IGGTSRGSSS NGDNNFFGMI FGNNAPPRPR LTLLLLPLLM ICVLSTSTLL LW
Best Arabidopsis Sequence Match ( AT3G54920.1 )
(BLAST)
001: MLLQNFSNTI FLLCLFFTLL SATKPLNLTL PHQHPSPDSV ALHVIRSVNE SLARRQLSSP SSSSSSSSSS SSSSCRTGNP IDDCWRCSDA DWSTNRQRLA
101: DCSIGFGHGT LGGKNGKIYV VTDSSDNNPT NPTPGTLRYG VIQEEPLWIV FSSNMLIRLK QELIINSYKT LDGRGSAVHI TGNGCLTLQY VQHIIIHNLH
201: IYDCKPSAGF EKRGRSDGDG ISIFGSQKIW VDHCSMSHCT DGLIDAVMGS TAITISNNYF THHDEVMLLG HDDNYAPDTG MQVTIAFNHF GQGLVQRMPR
301: CRRGYIHVVN NDFTEWKMYA IGGSGNPTIN SQGNRYSAPS DPSAKEVTKR VDSKDDGEWS NWNWRTEGDL MENGAFFVAS GEGMSSMYSK ASSVDPKAAS
401: LVDQLTRNAG VFGGPRDDQG QSGNSYSPYG GDGGGGGSSG GSSGGGMDVM GGTTRGSSSS SGDDSNVFQM IFGSDAPSRP RLTLLFSLLM ISVLSLSTLL
501: L
Arabidopsis Description
PMR6Probable pectate lyase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z04]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.