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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015070.1-P Field mustard endoplasmic reticulum, extracellular 99.8 99.8
CDY46471 Canola endoplasmic reticulum, extracellular 87.4 97.95
AT3G24670.1 Thale cress endoplasmic reticulum, extracellular 80.28 89.77
CDY01119 Canola endoplasmic reticulum, extracellular 71.34 80.69
CDY47327 Canola endoplasmic reticulum, extracellular 70.94 80.6
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 68.09 80.53
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 67.89 80.29
CDY05655 Canola extracellular 66.67 78.66
CDY33938 Canola extracellular 66.46 78.42
CDY19932 Canola extracellular 66.26 77.99
CDY56668 Canola extracellular 65.45 77.03
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 64.23 73.32
CDY61137 Canola extracellular 64.23 73.32
CDX89799 Canola extracellular 63.82 72.85
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 63.62 72.62
CDY70583 Canola cytosol 35.77 72.43
CDY18330 Canola cytosol 21.34 71.92
CDY12666 Canola extracellular 58.13 70.44
CDY28857 Canola extracellular 58.13 70.27
CDY32557 Canola extracellular 57.93 70.2
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 64.43 70.13
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 64.63 69.89
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 57.52 69.7
CDY08948 Canola endoplasmic reticulum, extracellular 57.32 69.46
CDY11033 Canola endoplasmic reticulum, extracellular 57.32 69.46
CDY34310 Canola endoplasmic reticulum, vacuole 57.32 69.46
CDY03419 Canola endoplasmic reticulum, extracellular 57.32 69.46
CDY56520 Canola extracellular 57.32 69.29
CDX92652 Canola endoplasmic reticulum, extracellular 57.11 69.21
CDY24847 Canola endoplasmic reticulum, extracellular 57.11 69.21
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 57.11 69.21
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 56.91 67.8
CDY18738 Canola endoplasmic reticulum, extracellular 64.23 66.39
CDY16732 Canola endoplasmic reticulum, golgi 56.1 64.49
CDY48132 Canola endoplasmic reticulum, golgi 56.1 64.49
CDY66697 Canola endoplasmic reticulum, golgi 57.93 63.76
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 52.64 62.86
CDX77470 Canola golgi, plasma membrane 58.13 62.31
CDY20049 Canola plastid, vacuole 51.83 61.89
CDY00156 Canola extracellular, plastid 51.83 61.89
CDY03964 Canola extracellular 51.22 61.16
CDY65626 Canola golgi 56.3 61.01
CDY34149 Canola extracellular 43.5 59.61
CDY06557 Canola extracellular 43.29 55.04
CDY20748 Canola extracellular 43.29 54.9
CDX98091 Canola extracellular 41.26 54.72
CDY30041 Canola extracellular 41.06 54.45
CDX98092 Canola extracellular 38.82 53.65
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 35.57 53.52
CDY30040 Canola extracellular 38.41 53.09
CDX70244 Canola vacuole 46.34 51.7
CDX73573 Canola extracellular 48.78 50.42
CDX78152 Canola extracellular 48.58 50.21
CDX67560 Canola plasma membrane 49.8 50.0
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 48.78 48.88
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 48.78 48.78
CDX79122 Canola extracellular 39.43 48.38
CDY27438 Canola extracellular 40.04 48.28
CDX76388 Canola extracellular 40.04 48.28
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 47.15 47.15
CDX85564 Canola extracellular 45.33 47.15
CDY17432 Canola extracellular 43.9 47.06
CDX78607 Canola endoplasmic reticulum, extracellular 45.33 46.95
CDY04133 Canola extracellular 43.7 46.84
CDY63769 Canola extracellular 45.53 46.76
CDX70590 Canola endoplasmic reticulum, extracellular 45.12 46.74
CDY11284 Canola extracellular, golgi 48.37 46.67
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 44.31 46.48
CDY45254 Canola endoplasmic reticulum 43.09 46.29
CDX91953 Canola endoplasmic reticulum, extracellular 44.31 46.28
CDX74293 Canola endoplasmic reticulum, extracellular 44.31 46.28
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 42.89 46.07
CDY45202 Canola extracellular 42.89 45.97
CDY39314 Canola extracellular 42.68 45.75
CDY03043 Canola extracellular 42.68 45.75
CDY09356 Canola extracellular 42.48 45.73
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 42.48 45.63
CDY41679 Canola endoplasmic reticulum, plasma membrane 42.28 45.51
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 47.56 45.26
CDY58428 Canola endoplasmic reticulum, golgi, plastid 47.36 45.24
CDY13312 Canola plasma membrane 48.78 44.78
CDY41382 Canola endoplasmic reticulum, golgi 47.76 44.59
CDX69550 Canola endoplasmic reticulum, extracellular 44.51 43.89
CDY66593 Canola endoplasmic reticulum, extracellular 44.51 43.89
CDX81636 Canola endoplasmic reticulum 42.28 42.98
CDY53552 Canola extracellular 42.89 42.63
CDY70492 Canola endoplasmic reticulum, extracellular 2.85 25.45
CDY53553 Canola mitochondrion, nucleus 0.81 2.63
CDX96858 Canola mitochondrion, nucleus 0.81 2.63
CDX81635 Canola mitochondrion, nucleus 0.81 2.63
CDY66531 Canola mitochondrion, nucleus 0.81 2.63
CDY45253 Canola mitochondrion, nucleus 0.81 2.63
CDY09355 Canola mitochondrion, nucleus 0.61 1.97
CDY41678 Canola mitochondrion, nucleus 0.61 1.97
CDY45199 Canola mitochondrion, nucleus 0.61 1.97
CDY04136 Canola mitochondrion, nucleus 0.61 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078CKF2InterPro:AmbAllergenEnsemblPlants:CDX77400
ProteinID:CDX77400ProteinID:CDX77400.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00128236001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF34InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EF4D1ESEG:seg
Description
BnaA07g05380D
Coordinates
chrLK031811:+:287728..293269
Molecular Weight (calculated)
54652.6 Da
IEP (calculated)
8.270
GRAVY (calculated)
-0.278
Length
492 amino acids
Sequence
(BLAST)
001: MAVSRNLLAL SASLLVLAFF VCVNASTRAH ETEELKSQSL TNSSTADNLS DSAWNEHAVE NPEEVAALVD MTIRNSTERR KLGFFSCATG NPIDDCWRCD
101: RNWHLRRKRL ANCAIGFGRN AVGGRDGRYY VVTDPSDNDV INPRPGTLRH AVIQDRPLWI VFKRDMVITL KQELIMNSFK TIDGRGVNVA IAGGACITIQ
201: YVTNIIIHGI NIHDCRRTGN AMVRSSPSHY GWRTMADGDA ISIFGSSHIW IDHNSLSNCA DGLIDAIMGS TAITISNNYL THHNEVMLMG HSDSYTRDKV
301: MQVTIAYNHF GEGLIQRMPR CRHGYFHVVN NDYTHWVMYA IGGSANPTIN SQGNRFLAPA NPFAKEVTKR VGSWQGEWKQ WNWRSQGDLM LNGAYFTRSG
401: AATPASYARA SSLGAKPSSV VSMLTYSSGA LKCRIGFSDL EDFWDNLPVS RLKYNALDDF PGSLPDDFHL SQGARNTRAS QSPLYSEIKA LI
Best Arabidopsis Sequence Match ( AT3G24670.1 )
(BLAST)
001: MVIFSRSFLA LSTTLIILAL CINSSTMAQE TEDLNSHSSS NSSTANKLPN DDGAWNEHAV KNPEEVAAMV DMKIKNSTER RRLGFFSCAT GNPIDDCWRC
101: DRNWHLRRKR LANCAIGFGR NAIGGRDGRY YVVTDPSDHD AVNPRPGTLR HAVIQDRPLW IVFKRDMVIT LTQELIMNSF KTIDGRGVNV AIAGGACITI
201: QYVTNIIIHG INVHDCRRTG NAMVRSSPSH YGWRTMADGD AISIFGSSHI WIDHNSLSNC ADGLIDAIMG STAITISNNY MTHHNEVMLM GHSDSYTRDK
301: LMQVTIAYNH FGEGLIQRMP RCRHGYFHVV NNDYTHWVMY AIGGSANPTI NSQGNRFLAP GNPFAKEVTK RVGSWQGEWK QWNWRSQGDL MLNGAYFTKS
401: GAAAPASYAR ASSLGAKPAS VVSMLTYSSG ALKCRIGMRC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178VLR8]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.