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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • nucleus 1
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, golgi, mitochondrion, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 100.0 100.0
CDX70590 Canola endoplasmic reticulum, extracellular 97.05 97.05
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 86.53 87.08
CDX85564 Canola extracellular 84.0 84.36
CDX69550 Canola endoplasmic reticulum, extracellular 88.0 83.77
CDY66593 Canola endoplasmic reticulum, extracellular 87.79 83.57
CDY63769 Canola extracellular 84.21 83.51
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 76.21 77.19
CDX74293 Canola endoplasmic reticulum, extracellular 76.42 77.07
CDX91953 Canola endoplasmic reticulum, extracellular 76.42 77.07
TraesCS4A01G385700.1 Wheat cytosol 28.42 61.64
GSMUA_Achr10P... Banana cytosol 44.21 60.69
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.0 60.05
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.37 59.91
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.89 58.58
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 53.26 57.76
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 53.47 57.34
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 52.63 56.43
PGSC0003DMT400003310 Potato extracellular 52.84 56.28
KRG93502 Soybean extracellular 52.42 56.21
Solyc02g087670.2.1 Tomato extracellular 52.63 56.05
CDY56668 Canola extracellular 48.84 55.5
KRH01130 Soybean extracellular 51.37 55.45
GSMUA_Achr10P... Banana extracellular 45.47 55.38
CDY19932 Canola extracellular 48.63 55.26
PGSC0003DMT400017863 Potato extracellular 51.37 55.2
CDY05655 Canola extracellular 48.42 55.16
CDY33938 Canola extracellular 48.42 55.16
PGSC0003DMT400014086 Potato extracellular 51.37 54.59
HORVU6Hr1G038630.1 Barley extracellular 46.53 54.57
Solyc03g058890.2.1 Tomato extracellular 51.58 54.57
Os06t0144200-01 Rice extracellular, plasma membrane 51.58 54.44
CDY70583 Canola cytosol 27.79 54.32
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 51.16 54.24
CDY11033 Canola endoplasmic reticulum, extracellular 46.32 54.19
CDY12666 Canola extracellular 46.32 54.19
CDY32557 Canola extracellular 46.32 54.19
CDY18330 Canola cytosol 16.63 54.11
CDY04133 Canola extracellular 52.21 54.03
CDY17432 Canola extracellular 52.21 54.03
CDY03419 Canola endoplasmic reticulum, extracellular 46.11 53.94
CDY34310 Canola endoplasmic reticulum, vacuole 46.11 53.94
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 46.74 53.75
CDX92652 Canola endoplasmic reticulum, extracellular 45.89 53.69
Zm00001d000216_P001 Maize golgi, vacuole 49.47 53.65
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 44.84 53.65
OQU75805 Sorghum mitochondrion 49.89 53.62
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.95 53.61
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 46.95 53.61
Os02t0214400-01 Rice plasma membrane 50.11 53.36
CDY28857 Canola extracellular 45.68 53.32
CDY56520 Canola extracellular 45.68 53.32
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.16 53.06
CDY08948 Canola endoplasmic reticulum, extracellular 45.26 52.96
CDY24847 Canola endoplasmic reticulum, extracellular 45.26 52.96
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.26 52.96
CDY09356 Canola extracellular 50.95 52.95
CDY41679 Canola endoplasmic reticulum, plasma membrane 50.95 52.95
CDY03043 Canola extracellular 51.16 52.94
CDY45202 Canola extracellular 51.16 52.94
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.89 52.91
CDY20049 Canola plastid, vacuole 45.68 52.67
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.74 52.62
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.84 52.46
CDY00156 Canola extracellular, plastid 45.47 52.43
CDY03964 Canola extracellular 45.47 52.43
EER88571 Sorghum endoplasmic reticulum, plasma membrane 50.11 52.42
Os06t0583900-01 Rice plasma membrane 49.26 52.23
CDY61137 Canola extracellular 47.37 52.2
CDX89799 Canola extracellular 47.16 51.97
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 47.16 51.97
CDY01119 Canola endoplasmic reticulum, extracellular 47.58 51.95
TraesCS6D01G170500.1 Wheat golgi 46.32 51.76
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 46.95 51.74
CDY47327 Canola endoplasmic reticulum, extracellular 47.16 51.73
EES06507 Sorghum golgi, vacuole 48.42 51.69
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 46.11 51.53
CDY48132 Canola endoplasmic reticulum, golgi 46.32 51.4
CDY46471 Canola endoplasmic reticulum, extracellular 47.37 51.25
CDY16732 Canola endoplasmic reticulum, golgi 46.11 51.17
CDY45254 Canola endoplasmic reticulum 49.26 51.09
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 46.53 51.04
CDY39314 Canola extracellular 49.26 50.98
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 48.42 50.88
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 48.63 50.77
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.68 50.75
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 47.16 50.45
CDY34149 Canola extracellular 38.11 50.42
Os06t0144900-01 Rice mitochondrion 50.11 50.32
CDX98092 Canola extracellular 37.68 50.28
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 46.95 50.23
TraesCS7D01G356700.1 Wheat extracellular 46.95 50.23
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 47.79 50.11
CDX81636 Canola endoplasmic reticulum 50.74 49.79
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 46.53 49.77
CDY30040 Canola extracellular 37.26 49.72
PGSC0003DMT400014085 Potato extracellular, golgi 41.47 49.5
Solyc03g058910.2.1 Tomato extracellular, golgi 41.47 49.5
CDY65626 Canola golgi 46.95 49.12
Zm00001d036945_P001 Maize endoplasmic reticulum 43.16 48.81
CDY53552 Canola extracellular 50.74 48.69
CDY66697 Canola endoplasmic reticulum, golgi 45.47 48.32
CDY18738 Canola endoplasmic reticulum, extracellular 48.42 48.32
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 46.95 48.16
CDX77470 Canola golgi, plasma membrane 46.11 47.71
HORVU7Hr1G019500.1 Barley mitochondrion 52.0 47.5
CDX98091 Canola extracellular 37.05 47.44
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 32.63 47.4
CDY30041 Canola extracellular 36.63 46.9
CDX77400 Canola endoplasmic reticulum, extracellular 46.95 45.33
CDX79122 Canola extracellular 38.11 45.14
CDY20748 Canola extracellular 35.79 43.81
CDY06557 Canola extracellular 35.58 43.67
CDX76388 Canola extracellular 37.47 43.63
CDY27438 Canola extracellular 37.05 43.14
CDX70244 Canola vacuole 39.79 42.86
CDX73573 Canola extracellular 42.32 42.23
CDX78152 Canola extracellular 42.11 42.02
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 43.37 41.96
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 43.37 41.87
CDX67560 Canola plasma membrane 42.74 41.43
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 42.32 40.85
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 42.11 38.68
CDY11284 Canola extracellular, golgi 40.84 38.04
GSMUA_Achr7P08840_001 Banana nucleus 52.84 37.46
CDY13312 Canola plasma membrane 42.11 37.31
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.21 37.09
Solyc02g067450.2.1 Tomato extracellular 48.0 37.01
CDY41382 Canola endoplasmic reticulum, golgi 40.63 36.62
CDY70492 Canola endoplasmic reticulum, extracellular 1.26 10.91
CDX81635 Canola mitochondrion, nucleus 0.42 1.32
CDX96858 Canola mitochondrion, nucleus 0.42 1.32
CDY04136 Canola mitochondrion, nucleus 0.42 1.32
CDY09355 Canola mitochondrion, nucleus 0.42 1.32
CDY41678 Canola mitochondrion, nucleus 0.42 1.32
CDY45199 Canola mitochondrion, nucleus 0.42 1.32
CDY45253 Canola mitochondrion, nucleus 0.42 1.32
CDY53553 Canola mitochondrion, nucleus 0.42 1.32
CDY66531 Canola mitochondrion, nucleus 0.42 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078CPF6InterPro:AmbAllergenEnsemblPlants:CDX78607
ProteinID:CDX78607ProteinID:CDX78607.1GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0030570GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00130020001
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI000253FBB8SEG:seg::
Description
BnaA03g05190D
Coordinates
chrLK031815:+:1497266..1499446
Molecular Weight (calculated)
54214.5 Da
IEP (calculated)
8.682
GRAVY (calculated)
-0.572
Length
475 amino acids
Sequence
(BLAST)
001: MVMARLLKLM LVLCIVGLIP TIRADMSELD EYWSGRADEA REFTLQAYHS DPYEIIDHFH ERHYDNSTDV TPTEEDNNTK PEEVENEVIE MVGSGDNSTN
101: STRRSLRGKG KGKWSKLKGP CTASNPIDKC WRCRKNWSKR RKKLVKCVRG FGHMTVGGKH GRIYVVTSNL DEDMVNPEPG TLRHAVIQKE PLWIIFKNDM
201: SIRLNQELLI NSFKTIDARG ANVHIAHGAG VTMQFVRHVI IHGLHIHHIS ESSGGMIRDS ADHFGMRTRA DGDGLSIYGS SNIWLDHVSM SQCQDGLIDA
301: IVGSTAITIS NSHFTHHNDV MLLGAQNTYD LDKKMQVTVA YNHFGKGLVQ RMPRIRWGFV HVVNNDYTHW ELYAIGGSQS PTILSQGNRF IAPPHLPHYR
401: EVTKRDYAPE EEWKHWNWRS EKDIFMNGAY FRQSGDPNYE TDHTRRNMIK PKNGYAVSKL TKYAGALDCR VGRRC
Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)
001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC
Arabidopsis Description
Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.