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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY04133 Canola extracellular 97.39 97.39
CDY45202 Canola extracellular 85.84 85.84
CDY03043 Canola extracellular 85.4 85.4
AT2G02720.1 Thale cress extracellular, vacuole 80.39 81.1
CDY09356 Canola extracellular 80.39 80.74
CDY41679 Canola endoplasmic reticulum, plasma membrane 80.17 80.53
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 73.86 74.02
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 72.98 73.14
CDY39314 Canola extracellular 71.9 71.9
CDY45254 Canola endoplasmic reticulum 71.68 71.83
CDY53552 Canola extracellular 72.98 67.68
CDX81636 Canola endoplasmic reticulum 71.02 67.36
TraesCS4A01G385700.1 Wheat cytosol 29.41 61.64
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.86 59.45
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.64 58.69
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 55.34 57.99
KRH45851 Soybean extracellular 56.21 57.21
KRH74782 Soybean extracellular 55.56 56.92
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 54.03 56.75
KRH69345 Soybean extracellular 55.12 56.6
GSMUA_Achr10P... Banana cytosol 42.48 56.36
PGSC0003DMT400017863 Potato extracellular 53.38 55.43
GSMUA_Achr10P... Banana extracellular 47.06 55.38
PGSC0003DMT400014086 Potato extracellular 53.81 55.26
Solyc03g058890.2.1 Tomato extracellular 54.03 55.23
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 53.16 55.08
CDY18330 Canola cytosol 17.43 54.79
PGSC0003DMT400003310 Potato extracellular 52.72 54.26
Solyc02g087670.2.1 Tomato extracellular 52.72 54.26
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 50.98 54.04
CDY70583 Canola cytosol 28.54 53.91
Os06t0144200-01 Rice extracellular, plasma membrane 52.29 53.33
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.97 53.15
Os06t0583900-01 Rice plasma membrane 51.85 53.12
Zm00001d000216_P001 Maize golgi, vacuole 50.54 52.97
CDY34310 Canola endoplasmic reticulum, vacuole 46.84 52.96
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 54.03 52.88
EER88571 Sorghum endoplasmic reticulum, plasma membrane 52.29 52.86
CDX70590 Canola endoplasmic reticulum, extracellular 54.68 52.84
CDY03419 Canola endoplasmic reticulum, extracellular 46.62 52.71
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 51.42 52.68
CDY24847 Canola endoplasmic reticulum, extracellular 46.41 52.46
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 46.41 52.46
EES06507 Sorghum golgi, vacuole 50.76 52.36
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.54 52.25
TraesCS7D01G356700.1 Wheat extracellular 50.54 52.25
CDY08948 Canola endoplasmic reticulum, extracellular 46.19 52.22
CDX78607 Canola endoplasmic reticulum, extracellular 54.03 52.21
CDY12666 Canola extracellular 45.97 51.97
CDY32557 Canola extracellular 45.97 51.97
CDY00156 Canola extracellular, plastid 46.62 51.94
HORVU6Hr1G038630.1 Barley extracellular 45.75 51.85
CDX74293 Canola endoplasmic reticulum, extracellular 53.16 51.8
CDX91953 Canola endoplasmic reticulum, extracellular 53.16 51.8
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 50.11 51.8
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.11 51.8
CDY63769 Canola extracellular 54.03 51.77
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 45.75 51.72
CDY28857 Canola extracellular 45.75 51.6
CDY56520 Canola extracellular 45.75 51.6
CDX92652 Canola endoplasmic reticulum, extracellular 45.53 51.48
CDY20049 Canola plastid, vacuole 46.19 51.46
OQU75805 Sorghum mitochondrion 49.46 51.36
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 46.19 51.33
CDY11033 Canola endoplasmic reticulum, extracellular 45.32 51.23
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.97 51.21
CDX85564 Canola extracellular 52.72 51.16
Os06t0144900-01 Rice mitochondrion 52.51 50.95
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 47.71 50.81
Solyc03g058910.2.1 Tomato extracellular, golgi 44.01 50.75
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 51.2 50.54
CDY03964 Canola extracellular 45.32 50.49
Os02t0214400-01 Rice plasma membrane 49.02 50.45
TraesCS6D01G170500.1 Wheat golgi 46.62 50.35
CDX89799 Canola extracellular 47.28 50.35
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 47.28 50.35
CDY61137 Canola extracellular 47.28 50.35
PGSC0003DMT400014085 Potato extracellular, golgi 43.57 50.25
CDY48132 Canola endoplasmic reticulum, golgi 46.84 50.23
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 45.32 50.0
CDY16732 Canola endoplasmic reticulum, golgi 46.62 50.0
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 49.24 49.89
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 46.19 49.88
CDY05655 Canola extracellular 45.32 49.88
CDY33938 Canola extracellular 45.32 49.88
CDY56668 Canola extracellular 45.32 49.76
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 45.1 49.76
CDY66593 Canola endoplasmic reticulum, extracellular 54.03 49.7
CDY19932 Canola extracellular 45.1 49.52
CDX69550 Canola endoplasmic reticulum, extracellular 53.81 49.5
CDY47327 Canola endoplasmic reticulum, extracellular 46.62 49.42
CDY01119 Canola endoplasmic reticulum, extracellular 46.62 49.2
CDY34149 Canola extracellular 38.34 49.03
CDY46471 Canola endoplasmic reticulum, extracellular 46.84 48.97
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 34.86 48.93
Zm00001d036945_P001 Maize endoplasmic reticulum 44.66 48.81
CDX98092 Canola extracellular 37.47 48.31
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 47.49 48.23
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 47.49 47.91
CDY30040 Canola extracellular 37.04 47.75
CDX98091 Canola extracellular 38.13 47.17
CDY66697 Canola endoplasmic reticulum, golgi 45.75 46.98
CDY65626 Canola golgi 46.41 46.92
CDY20748 Canola extracellular 39.43 46.65
CDY30041 Canola extracellular 37.69 46.63
CDY06557 Canola extracellular 39.22 46.51
CDY27438 Canola extracellular 41.18 46.32
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 46.62 46.22
CDX79122 Canola extracellular 40.3 46.13
CDX76388 Canola extracellular 40.74 45.83
HORVU7Hr1G019500.1 Barley mitochondrion 51.85 45.77
CDX77470 Canola golgi, plasma membrane 45.53 45.53
CDY18738 Canola endoplasmic reticulum, extracellular 47.06 45.38
CDX77400 Canola endoplasmic reticulum, extracellular 47.06 43.9
CDX70244 Canola vacuole 41.18 42.86
CDX73573 Canola extracellular 44.01 42.44
CDX78152 Canola extracellular 44.01 42.44
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 45.1 42.07
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 44.44 41.55
CDX67560 Canola plasma membrane 44.23 41.43
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 44.23 41.26
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 43.57 38.68
CDY11284 Canola extracellular, golgi 42.05 37.84
CDY13312 Canola plasma membrane 43.79 37.5
CDY58428 Canola endoplasmic reticulum, golgi, plastid 42.05 37.48
Solyc02g067450.2.1 Tomato extracellular 49.89 37.18
GSMUA_Achr7P08840_001 Banana nucleus 54.03 37.01
CDY41382 Canola endoplasmic reticulum, golgi 42.27 36.81
CDY70492 Canola endoplasmic reticulum, extracellular 1.09 9.09
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078FXG2UniProt:A0A078FXG2InterPro:AmbAllergen
EnsemblPlants:CDY17432ProteinID:CDY17432ProteinID:CDY17432.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00095567001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0001B6406BSEG:seg:::
Description
BnaC09g21050DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FXG2]
Coordinates
chrLK032073:-:204616..206440
Molecular Weight (calculated)
51479.5 Da
IEP (calculated)
9.924
GRAVY (calculated)
-0.457
Length
459 amino acids
Sequence
(BLAST)
001: MAVAYLNFGS HVFAFLSLCL AVVAPSVQAH VAVFDEYWTQ RQSDALRQTI ESYDPNPFNV TDHLNYHAAL AMETTGADNG TRRKLGQVGD GRKTKRRGGR
101: YHSLNAIDKC WRGHRNWHKN RKKLADCVLG FGRKTTGGKK GPIYVVTDAA DDDLMNPKPG TLRYAVTRDR PLWIIFGRSM IIKLQQELII NSDKTIDGRG
201: ANVHITGGAG LTLQFVKNVI IHNIHIKTII PGNGGMIRDS EHHFGHRTTS DGDGINIFGS TNVWIDHVSM TNCTDGMIDV IMGSTAITIS NCHLTDHNEV
301: MLFGAREEDV IDKKMQITVA FNHFGKRLVQ RMPRARFGLV HVVNNDYTHW EMYAIGGNMN PTIISQGNRF TAPPKENCKQ VTKREYAKYS EWKSWNWQSE
401: RDYFLNGAYF VKSGRANAWS PAPENPIPRH FAIQPQPGTG VRRLTKDAGT LGCRPGKSC
Best Arabidopsis Sequence Match ( AT2G02720.1 )
(BLAST)
001: MVNLGSYVFV FVALSLTVVV PSVQAHIAEY DEYWTQRQTN ALRETLESYD PNPENVTDHF NYHAALAMET TGIVNETRRD LRQVGRGKKT TRRGGRFESL
101: NAIDKCWRGD KNWDKNRKKL ADCVLGFGRK TTGGKNGPIY VVTDPSDNDL LKPKPGTIRH AVTRDRPLWI IFARSMIIKL QQELIITNDK TIDGRGAKIY
201: ITGGAGLTLQ FVRNVIIHNI HIKQIKRGAG GLIIDSEQHF GLRTVSDGDG INIFGATNVW IDHVSMTDCS DGMIDAIMGS TAITISNSHF TDHDEVMLFG
301: GTNKDVIDKK MQITVAFNHF GKRLKQRMPR VRFGLVHVVN NDYTHWEMYA IGGNMNPTII SQGNRFIAPP IEDSKQVTKR EYTPYPEWKS WNWQSEKDYF
401: LNGAYFVQSG KANAWSATPK NPIPRKFAIR PQPGTKVRRL TKDAGTLGCK PGKSC
Arabidopsis Description
Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.