Factsheet for Os06t0144900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0144200-01	Rice	extracellular, plasma membrane	66.81	70.22
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	68.5	69.68
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	65.75	68.65
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.39	59.14
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	53.28	57.67
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	53.28	57.53
GSMUA_Achr10P...	Banana	cytosol	41.86	57.23
KRH54508	Soybean	extracellular	40.17	57.06
KRH63402	Soybean	extracellular	52.22	56.78
GSMUA_Achr10P...	Banana	extracellular	46.72	56.67
VIT_17s0000g05740.t01	Wine grape	extracellular	51.37	56.64
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	52.22	56.26
Solyc06g071020.2.1	Tomato	extracellular	51.37	55.86
PGSC0003DMT400083135	Potato	extracellular	51.37	55.86
PGSC0003DMT400046723	Potato	endoplasmic reticulum, golgi, vacuole	50.95	55.4
Os06t0583900-01	Rice	plasma membrane	51.8	54.69
Solyc03g113150.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	50.11	54.48
PGSC0003DMT400014086	Potato	extracellular	51.16	54.14
Os02t0214400-01	Rice	plasma membrane	50.95	54.04
PGSC0003DMT400003310	Potato	extracellular	50.95	54.04
Solyc03g058890.2.1	Tomato	extracellular	51.16	53.9
KRH74782	Soybean	extracellular	50.95	53.79
Solyc01g010740.2.1	Tomato	endoplasmic reticulum, extracellular	49.89	53.76
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	50.32	53.72
Solyc02g087670.2.1	Tomato	extracellular	50.53	53.59
PGSC0003DMT400002241	Potato	extracellular	49.68	53.53
KRH69345	Soybean	extracellular	50.53	53.47
KRH45851	Soybean	extracellular	50.95	53.44
PGSC0003DMT400017863	Potato	extracellular	49.47	52.94
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	44.19	52.64
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	49.26	52.6
CDY17432	Canola	extracellular	50.95	52.51
CDY04133	Canola	extracellular	50.74	52.29
Bra017412.1-P	Field mustard	extracellular	50.74	52.29
Bra026832.1-P	Field mustard	extracellular	49.89	52.21
KRG93502	Soybean	extracellular	48.84	52.14
KRH01130	Soybean	extracellular	48.41	52.05
Bra026221.1-P	Field mustard	endoplasmic reticulum	50.32	51.97
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.11	51.86
AT1G14420.1	Thale cress	endoplasmic reticulum	50.32	51.85
Solyc03g058910.2.1	Tomato	extracellular, golgi	43.55	51.76
CDY68729	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.68	51.31
AT2G02720.1	Thale cress	extracellular, vacuole	49.26	51.21
CDY45202	Canola	extracellular	49.68	51.2
Bra024811.1-P	Field mustard	extracellular	49.68	51.2
CDY39314	Canola	extracellular	49.68	51.2
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	50.95	51.06
CDX96854	Canola	endoplasmic reticulum, extracellular, plasma membrane	49.26	50.87
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	49.26	50.87
CDY03043	Canola	extracellular	49.26	50.76
CDX70590	Canola	endoplasmic reticulum, extracellular	50.95	50.74
PGSC0003DMT400014085	Potato	extracellular, golgi	42.49	50.5
CDX85564	Canola	extracellular	50.11	50.11
CDX78607	Canola	endoplasmic reticulum, extracellular	50.32	50.11
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	50.32	50.11
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	50.11	49.89
CDY63769	Canola	extracellular	50.32	49.69
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	52.22	49.5
CDX69550	Canola	endoplasmic reticulum, extracellular	52.22	49.5
CDY66593	Canola	endoplasmic reticulum, extracellular	52.22	49.5
Bra023504.1-P	Field mustard	extracellular	50.32	49.48
PGSC0003DMT400045436	Potato	extracellular	47.99	49.46
Solyc05g007080.2.1	Tomato	extracellular	47.57	49.34
CDX74293	Canola	endoplasmic reticulum, extracellular	48.84	49.04
CDX91953	Canola	endoplasmic reticulum, extracellular	48.84	49.04
CDY28691	Canola	endoplasmic reticulum, extracellular, vacuole	48.63	49.04
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	48.41	48.62
CDX81636	Canola	endoplasmic reticulum	48.84	47.73
CDY53552	Canola	extracellular	49.26	47.07
Os05t0293500-01	Rice	extracellular	36.58	46.38
Os10t0457200-01	Rice	plasma membrane	42.71	41.14
GSMUA_Achr7P08840_001	Banana	nucleus	52.85	37.31
Solyc02g067450.2.1	Tomato	extracellular	47.78	36.69
CDY04136	Canola	mitochondrion, nucleus	0.42	1.32

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	UniProt:A0A0P0WS98	InterPro:AmbAllergen	ProteinID:BAS96128.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490	GO:GO:0046872
InterPro:IPR012334	EnsemblPlantsGene:Os06g0144900	EnsemblPlants:Os06t0144900-01	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF60	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	UniParc:UPI000393A855	SEG:seg	:	:

Description

Pectate lyase/Amb allergen domain containing protein. (Os06t0144900-01)

Coordinates

chr6:+:2372992..2374946

Molecular Weight (calculated)

52794.4 Da

IEP (calculated)

10.360

GRAVY (calculated)

-0.278

Length

473 amino acids

Sequence
(BLAST)

001: VLFPAVRRPA GAALHTPIDR SEPAGMAGSV VTRSPLCSIL FYVLATAAAA TATATLVGNI TADEEYWAKR SEVARSFNRA AYVSDPVAVL NRFNEDVLNT
101: TTATAAAARR SLMRRYRRRG PCTVTNPIDL CWRCRKNWAS RRKRLAKCAM GFGHKATGGL AGKIYIVTDA GDEHLVIPRR GTLRHAVIQE RPLWIVFARS
201: MVIRLAKELI VTSDKTIDGR GAQVHVTGAQ ITVQAVSNVI IHNLHIHNSV PRSGGLIRDS MHHFGIRGES DGDGISVMGS SNIWIDHVSM SNCSDGLIDI
301: TDGSTAITIS NSHFTKHDHV MLFGARDDSP KDKIMQVTLA FNHFGKGLVQ RMPRCRFGFF HMVNNDYTHW LMYAIGGNMN PTIISQGNRF RASDDMKLKE
401: VTKREYTSYD EYKEWVWKSQ DDLFLNGAFF NESGGRNERR YNRLDLIQAR NGRYVGRMTR FAGTLPCRVG KKC

Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)

001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC

Arabidopsis Description

Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.