Factsheet for Bra023504.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85564	Canola	extracellular	98.13	99.79
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	84.41	86.02
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	83.16	84.21
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	84.41	81.36
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	76.51	78.13
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	56.13	61.5
GSMUA_Achr10P...	Banana	cytosol	43.24	60.12
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.3	60.05
TraesCS4A01G385700.1	Wheat	cytosol	27.03	59.36
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	52.6	57.89
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	53.22	57.79
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	51.56	56.62
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	51.77	56.21
GSMUA_Achr10P...	Banana	extracellular	45.32	55.9
KRG93502	Soybean	extracellular	51.35	55.76
PGSC0003DMT400003310	Potato	extracellular	51.56	55.61
Solyc02g087670.2.1	Tomato	extracellular	51.35	55.38
PGSC0003DMT400017863	Potato	extracellular	50.52	54.98
Bra020672.1-P	Field mustard	extracellular	47.4	54.68
Bra026832.1-P	Field mustard	extracellular	51.35	54.65
PGSC0003DMT400014086	Potato	extracellular	50.52	54.36
Solyc03g058890.2.1	Tomato	extracellular	50.73	54.34
Bra036155.1-P	Field mustard	extracellular	47.19	54.31
KRH01130	Soybean	extracellular	49.27	53.86
Bra004073.1-P	Field mustard	extracellular	45.53	53.81
Bra032696.1-P	Field mustard	endoplasmic reticulum, extracellular	45.95	53.51
Bra013833.1-P	Field mustard	endoplasmic reticulum, vacuole	44.91	53.2
Bra033980.1-P	Field mustard	extracellular	44.91	53.2
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	46.78	53.19
OQU75805	Sorghum	mitochondrion	48.86	53.17
Bra017412.1-P	Field mustard	extracellular	50.73	53.16
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	49.48	53.12
Os06t0144200-01	Rice	extracellular, plasma membrane	49.69	53.11
HORVU6Hr1G038630.1	Barley	extracellular	44.7	53.09
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	49.9	52.86
EES06507	Sorghum	golgi, vacuole	48.86	52.81
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.1	52.74
Bra004254.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.49	52.71
Os02t0214400-01	Rice	plasma membrane	48.86	52.69
Bra035852.1-P	Field mustard	extracellular	44.91	52.68
Zm00001d000216_P001	Maize	golgi, vacuole	47.82	52.51
Bra024811.1-P	Field mustard	extracellular	50.1	52.51
Os06t0583900-01	Rice	plasma membrane	48.86	52.46
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.07	52.35
Bra038614.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.91	52.3
Bra039081.1-P	Field mustard	extracellular, plastid	44.7	52.18
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	49.48	51.97
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	42.83	51.89
TraesCS6D01G170500.1	Wheat	golgi	45.74	51.76
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	46.36	51.74
Bra010482.1-P	Field mustard	endoplasmic reticulum, extracellular	43.66	51.72
Bra026221.1-P	Field mustard	endoplasmic reticulum	49.06	51.53
Bra025274.1-P	Field mustard	extracellular	44.07	51.46
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	46.15	51.27
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	45.11	51.06
Bra015341.1-P	Field mustard	extracellular	45.74	51.04
Bra032494.1-P	Field mustard	extracellular	45.53	50.81
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	46.78	50.68
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.78	50.68
TraesCS7D01G356700.1	Wheat	extracellular	46.78	50.68
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.65	50.32
Os06t0144900-01	Rice	mitochondrion	49.48	50.32
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.36	50.23
Bra033008.1-P	Field mustard	extracellular	41.37	50.0
Solyc03g058910.2.1	Tomato	extracellular, golgi	41.37	50.0
PGSC0003DMT400014085	Potato	extracellular, golgi	41.37	50.0
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	46.99	49.89
Bra019729.1-P	Field mustard	extracellular	38.25	49.73
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	46.57	49.67
Zm00001d036945_P001	Maize	endoplasmic reticulum	42.41	48.57
Bra019209.1-P	Field mustard	endoplasmic reticulum, extracellular	42.0	48.56
Bra015000.1-P	Field mustard	golgi, plasma membrane	44.91	48.32
Bra019730.1-P	Field mustard	extracellular	38.67	48.31
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	46.15	47.95
HORVU7Hr1G019500.1	Barley	mitochondrion	50.94	47.12
Bra013585.1-P	Field mustard	extracellular	38.46	47.07
Bra020859.1-P	Field mustard	extracellular	37.84	46.08
Bra015070.1-P	Field mustard	endoplasmic reticulum, extracellular	46.36	45.33
Bra035588.1-P	Field mustard	extracellular	35.14	43.56
Bra012756.1-P	Field mustard	extracellular	34.51	42.67
Bra006976.1-P	Field mustard	cytosol	40.54	42.67
Bra028549.1-P	Field mustard	plasma membrane	42.0	41.22
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	41.37	40.53
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	40.75	40.0
GSMUA_Achr7P08840_001	Banana	nucleus	52.39	37.61
Bra005799.1-P	Field mustard	extracellular, golgi	39.71	37.3
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	39.29	36.07
Solyc02g067450.2.1	Tomato	extracellular	45.53	35.55

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	InterPro:AmbAllergen	EnsemblPlantsGene:Bra023504	EnsemblPlants:Bra023504.1
EnsemblPlants:Bra023504.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	UniProt:M4E401	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF7	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI0002543642	SEG:seg	:

Description

AT5G15110 (E=2e-230) | lyase/ pectate lyase

Coordinates

chrA02:+:3658612..3660439

Molecular Weight (calculated)

55157.2 Da

IEP (calculated)

9.764

GRAVY (calculated)

-0.618

Length

481 amino acids

Sequence
(BLAST)

001: MEMTRLLKLM FTFYIAGLIP TIRANLSELD EYWSKRAGEA REFTLQAYHS NPYEVVDHFH ERHYDNSTDV KETEEDSDDE KPEEVEDDVI EMVGNEMNST
101: RRILRGKPKG KGKGKRKGKW SKLKGPCTAS NPIDKCWRCR SNWAKRRKNL VKCVRGFGHS TIGGKRGRIY VVTSNLDEDM VNPKPGTLRH AVIQKEPLWI
201: IFKNDMHIRL SQELMICSFK TIDARGADVH IAHGAGITIQ FVRHVIIHGL RIHHICQSNG GMIRDSTDHF GMRTKADGDG ISIYGSSMIW LDHISMSKCQ
301: DGLIDAIVGS TAITISNSHF THHNDVMLLG AQNDNQGDKK MQVTVAYNHF GKGLVQRMPR IRWGFVHVVN NDYTHWELYA IGGSQAPTIL SHGNRFIAPP
401: HKPHYREVTK RDYASEHEWK HWNWRSDKDM FMNGAYFRQS GNPHFKCHHT RKQMIKPKHG IAVSMLTKYA GALDCRVGKR C

Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)

001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC

Arabidopsis Description

Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.