Factsheet for Bra026583.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
nucleus 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, nucleus, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G02720.1	Thale cress	extracellular, vacuole	83.37	83.74
Bra024811.1-P	Field mustard	extracellular	81.4	81.05
Bra017412.1-P	Field mustard	extracellular	80.96	80.61
Bra026221.1-P	Field mustard	endoplasmic reticulum	73.96	73.8
Bra026832.1-P	Field mustard	extracellular	72.21	73.01
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	71.77	71.62
TraesCS4A01G385700.1	Wheat	cytosol	28.67	59.82
KRH45851	Soybean	extracellular	57.77	58.54
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.8	58.09
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	56.02	57.79
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	54.92	57.31
GSMUA_Achr10P...	Banana	extracellular	47.7	55.9
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	53.17	55.61
KRH69345	Soybean	extracellular	54.27	55.48
KRH74782	Soybean	extracellular	54.27	55.36
PGSC0003DMT400014086	Potato	extracellular	54.05	55.26
Solyc03g058890.2.1	Tomato	extracellular	54.05	55.01
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	53.17	54.85
PGSC0003DMT400017863	Potato	extracellular	52.95	54.75
PGSC0003DMT400003310	Potato	extracellular	53.17	54.48
GSMUA_Achr10P...	Banana	cytosol	41.14	54.34
Solyc02g087670.2.1	Tomato	extracellular	52.95	54.26
Zm00001d000216_P001	Maize	golgi, vacuole	50.55	52.74
Os06t0144200-01	Rice	extracellular, plasma membrane	51.42	52.22
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	45.08	51.89
OQU75805	Sorghum	mitochondrion	50.11	51.81
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	49.02	51.73
Bra013833.1-P	Field mustard	endoplasmic reticulum, vacuole	45.51	51.23
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	52.74	51.17
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	52.95	50.95
Bra004073.1-P	Field mustard	extracellular	45.3	50.86
TraesCS7D01G356700.1	Wheat	extracellular	49.23	50.68
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	50.33	50.66
EES06507	Sorghum	golgi, vacuole	49.23	50.56
Bra033980.1-P	Field mustard	extracellular	44.86	50.49
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	49.02	50.45
Os06t0583900-01	Rice	plasma membrane	49.45	50.45
Bra039081.1-P	Field mustard	extracellular, plastid	45.3	50.24
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	48.8	50.23
Os02t0214400-01	Rice	plasma membrane	49.02	50.22
Os06t0144900-01	Rice	mitochondrion	51.86	50.11
Bra023504.1-P	Field mustard	extracellular	52.74	50.1
Bra010482.1-P	Field mustard	endoplasmic reticulum, extracellular	44.42	50.0
Solyc03g058910.2.1	Tomato	extracellular, golgi	43.54	50.0
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	49.02	50.0
HORVU6Hr1G038630.1	Barley	extracellular	44.2	49.88
Bra035852.1-P	Field mustard	extracellular	44.64	49.76
Bra004254.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.2	49.75
Bra032696.1-P	Field mustard	endoplasmic reticulum, extracellular	44.86	49.64
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	48.14	49.55
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	49.02	49.45
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	53.83	49.3
Bra025274.1-P	Field mustard	extracellular	44.42	49.27
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	50.11	49.25
PGSC0003DMT400014085	Potato	extracellular, golgi	42.89	49.25
Bra038614.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.42	49.15
Bra033008.1-P	Field mustard	extracellular	42.45	48.74
TraesCS6D01G170500.1	Wheat	golgi	45.08	48.47
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	45.08	48.47
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	44.64	48.23
Bra020672.1-P	Field mustard	extracellular	43.98	48.2
Bra036155.1-P	Field mustard	extracellular	43.76	47.85
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.01	47.41
Bra032494.1-P	Field mustard	extracellular	44.42	47.1
Bra015341.1-P	Field mustard	extracellular	44.42	47.1
Bra019730.1-P	Field mustard	extracellular	39.39	46.75
Zm00001d036945_P001	Maize	endoplasmic reticulum	42.89	46.67
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	43.98	46.64
Bra019209.1-P	Field mustard	endoplasmic reticulum, extracellular	42.23	46.39
Bra019729.1-P	Field mustard	extracellular	37.42	46.22
Bra020859.1-P	Field mustard	extracellular	39.39	45.57
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.86	45.45
Bra013585.1-P	Field mustard	extracellular	38.95	45.29
Bra035588.1-P	Field mustard	extracellular	38.29	45.1
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	45.3	44.71
HORVU7Hr1G019500.1	Barley	mitochondrion	50.55	44.42
Bra015000.1-P	Field mustard	golgi, plasma membrane	43.33	44.3
Bra015070.1-P	Field mustard	endoplasmic reticulum, extracellular	45.73	42.48
Bra006976.1-P	Field mustard	cytosol	42.45	42.45
Bra012756.1-P	Field mustard	extracellular	35.23	41.39
Bra028549.1-P	Field mustard	plasma membrane	43.33	40.41
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	42.89	40.0
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	42.45	39.51
GSMUA_Achr7P08840_001	Banana	nucleus	54.7	37.31
Solyc02g067450.2.1	Tomato	extracellular	50.11	37.18
Bra005799.1-P	Field mustard	extracellular, golgi	40.04	35.74
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	40.04	34.92

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	InterPro:AmbAllergen	EnsemblPlantsGene:Bra026583	EnsemblPlants:Bra026583.1
EnsemblPlants:Bra026583.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	UniProt:M4ECS3	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF14	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025468B1	:

Description

AT2G02720 (E=9e-234) | pectate lyase family protein

Coordinates

chrA02:-:20418330..20420444

Molecular Weight (calculated)

51320.4 Da

IEP (calculated)

9.928

GRAVY (calculated)

-0.397

Length

457 amino acids

Sequence
(BLAST)

001: MAFAYLNLGS YVIVFVSLSI AIVAPSVQAH IAVFDDYWTQ RQANALRQTM ESYEPNPLNV TNHFNYHAAL AMETTGADNG TRRELGQVKA GQKARGGRFK
101: SLNAIDRCWR GDKNWAKNRK KLADCVLGFG LKTTGGKNGP IYVVTDASDD DLLSPKPGTL RHAVTRDRPL WIIFARTMVI KLQQELMITN DKTIDGRGVS
201: VYITGGAGFT LQFVKNVIIH NIHMKFIKRG FGGLIRDSEE HFGLRTISDG DGINIFGATN IWIDHVSMRN CSDGMIDAIM GSTAITISNS HFTDHKEVML
301: FGAKNGDEFD KKMQITVAFN HFGKRLNQRM PRVRYGMVHV VNNDYTHWEM YAIGGNMNPT IISQGNRFIA PPKEDCKQVT KREYTAYPEW KSWNWQSERD
401: YFLNGAYFVQ SGKSNAWSAA PKNPIPKEFT IRPQPGTKVR SLTKDAGTLD CRPGKSC

Best Arabidopsis Sequence Match ( AT2G02720.1 )
(BLAST)

001: MVNLGSYVFV FVALSLTVVV PSVQAHIAEY DEYWTQRQTN ALRETLESYD PNPENVTDHF NYHAALAMET TGIVNETRRD LRQVGRGKKT TRRGGRFESL
101: NAIDKCWRGD KNWDKNRKKL ADCVLGFGRK TTGGKNGPIY VVTDPSDNDL LKPKPGTIRH AVTRDRPLWI IFARSMIIKL QQELIITNDK TIDGRGAKIY
201: ITGGAGLTLQ FVRNVIIHNI HIKQIKRGAG GLIIDSEQHF GLRTVSDGDG INIFGATNVW IDHVSMTDCS DGMIDAIMGS TAITISNSHF TDHDEVMLFG
301: GTNKDVIDKK MQITVAFNHF GKRLKQRMPR VRFGLVHVVN NDYTHWEMYA IGGNMNPTII SQGNRFIAPP IEDSKQVTKR EYTPYPEWKS WNWQSEKDYF
401: LNGAYFVQSG KANAWSATPK NPIPRKFAIR PQPGTKVRRL TKDAGTLGCK PGKSC

Arabidopsis Description

Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.