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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 84.52 81.99
EER88571 Sorghum endoplasmic reticulum, plasma membrane 83.33 77.09
Os06t0583900-01 Rice plasma membrane 74.05 69.42
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 66.67 63.06
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 65.48 61.94
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 65.24 61.71
TraesCS7D01G356700.1 Wheat extracellular 65.0 61.49
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 53.81 51.48
GSMUA_Achr10P... Banana cytosol 42.38 51.45
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 52.86 50.8
VIT_17s0000g05740.t01 Wine grape extracellular 51.67 50.58
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 52.62 50.46
KRH01130 Soybean extracellular 52.86 50.45
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 53.1 50.34
PGSC0003DMT400002241 Potato extracellular 52.14 49.89
GSMUA_Achr10P... Banana extracellular 46.19 49.74
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 51.9 49.66
PGSC0003DMT400083135 Potato extracellular 50.95 49.2
KRH63402 Soybean extracellular 50.71 48.97
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 50.95 48.31
Zm00001d000216_P001 Maize golgi, vacuole 50.24 48.17
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 49.76 48.05
Solyc06g071020.2.1 Tomato extracellular 49.76 48.05
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 49.52 47.82
KRH54508 Soybean extracellular 37.86 47.75
Solyc02g087670.2.1 Tomato extracellular 49.76 46.86
KRG93502 Soybean extracellular 49.29 46.73
KRH74782 Soybean extracellular 49.76 46.65
PGSC0003DMT400003310 Potato extracellular 49.52 46.64
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 50.24 46.58
KRH45851 Soybean extracellular 50.0 46.56
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 49.05 46.5
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.48 46.29
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.24 46.07
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.24 46.07
PGSC0003DMT400017863 Potato extracellular 48.1 45.7
CDY04133 Canola extracellular 49.29 45.1
Bra017412.1-P Field mustard extracellular 49.29 45.1
PGSC0003DMT400014086 Potato extracellular 47.86 44.97
AT1G14420.1 Thale cress endoplasmic reticulum 49.05 44.88
CDY17432 Canola extracellular 48.81 44.66
KRH69345 Soybean extracellular 47.38 44.52
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 49.52 44.35
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 41.9 44.33
Bra026221.1-P Field mustard endoplasmic reticulum 48.33 44.32
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 49.76 44.28
Solyc03g058890.2.1 Tomato extracellular 47.14 44.1
Bra026832.1-P Field mustard extracellular 47.38 44.03
CDX91953 Canola endoplasmic reticulum, extracellular 49.29 43.95
CDX74293 Canola endoplasmic reticulum, extracellular 49.29 43.95
CDY39314 Canola extracellular 47.86 43.79
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 49.52 43.79
CDX70590 Canola endoplasmic reticulum, extracellular 49.52 43.79
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 48.81 43.52
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 48.81 43.16
CDX78607 Canola endoplasmic reticulum, extracellular 48.81 43.16
CDX85564 Canola extracellular 48.33 42.92
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 46.67 42.89
AT2G02720.1 Thale cress extracellular, vacuole 46.43 42.86
Solyc05g007080.2.1 Tomato extracellular 46.43 42.76
PGSC0003DMT400045436 Potato extracellular 46.67 42.7
CDY63769 Canola extracellular 48.57 42.59
CDY03043 Canola extracellular 46.43 42.48
Solyc03g058910.2.1 Tomato extracellular, golgi 40.24 42.46
PGSC0003DMT400014085 Potato extracellular, golgi 40.24 42.46
Bra023504.1-P Field mustard extracellular 48.57 42.41
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 50.24 42.28
CDY66593 Canola endoplasmic reticulum, extracellular 50.24 42.28
CDX69550 Canola endoplasmic reticulum, extracellular 50.24 42.28
CDY45202 Canola extracellular 46.19 42.27
Bra024811.1-P Field mustard extracellular 46.19 42.27
Zm00001d004448_P001 Maize endoplasmic reticulum 44.76 41.96
Zm00001d025067_P001 Maize mitochondrion 45.24 41.85
CDX81636 Canola endoplasmic reticulum 46.9 40.7
CDY53552 Canola extracellular 47.38 40.2
Zm00001d032806_P001 Maize cytosol, plastid 36.19 35.19
GSMUA_Achr7P08840_001 Banana nucleus 52.62 32.99
Solyc02g067450.2.1 Tomato extracellular 44.76 30.52
CDY04136 Canola mitochondrion, nucleus 0.48 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:50.4.2UniProt:A0A1D6LSL8ProteinID:AQK82439.1InterPro:AmbAllergen
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF27
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMUniParc:UPI0008454C1CEnsemblPlantsGene:Zm00001d036945EnsemblPlants:Zm00001d036945_P001EnsemblPlants:Zm00001d036945_T001SEG:seg
Description
Probable pectate lyase 3
Coordinates
chr6:+:106936546..106938093
Molecular Weight (calculated)
46952.5 Da
IEP (calculated)
7.972
GRAVY (calculated)
-0.473
Length
420 amino acids
Sequence
(BLAST)
001: MEEGFRWSTP CSLVLYSVFL LLSATASEAN IGDFDDYWQQ RKLMADAAAE ATYKHDPLEE DTSTRREMME QKKSKLSGPC TATNPIDRCW RCRQDWATDR
101: KRLARCAKGF GRNTTGGLAG KFYVVTDGTD DDVVNPRPGT LRWGVIQIEP LWITFAKTMI ITLKEELIIR GDKTIDGRGA QVRIANGAQL TVQFVNNVII
201: HNIHINDIVS SNKNGGYVRD SADHFGWRIV SDGDGVTVFG STNVWLDHLS LSNCQDGLID VIAKSTGVTI SNCHLTNHND RHALQLQRQA PRGPEDAEVP
301: LGLLPRGQQR VNDYTHWLMY AIGGSKAPTI ISQGNRYIAP PNFAAKQVTK QHDAPESEWK NWAWHSENDL FMEGAYFTVT AGQINRQLNK KDLIKPKPGS
401: YVTRLTRYAG SLACRPGEPC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.