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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 6
  • golgi 6
  • nucleus 2
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, extracellular, golgi, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_17s0000g05740.t01 Wine grape extracellular 68.79 70.4
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 70.39 69.75
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 68.34 67.72
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 64.92 65.22
GSMUA_Achr10P... Banana cytosol 50.57 64.16
GSMUA_Achr10P... Banana extracellular 56.49 63.59
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 63.33 63.47
TraesCS4A01G385700.1 Wheat cytosol 31.21 62.56
Solyc02g087670.2.1 Tomato extracellular 62.64 61.66
HORVU6Hr1G038630.1 Barley extracellular 56.49 61.23
PGSC0003DMT400003310 Potato extracellular 62.19 61.21
KRH45851 Soybean extracellular 61.73 60.09
Solyc03g058890.2.1 Tomato extracellular 61.05 59.69
KRH74782 Soybean extracellular 60.82 59.6
Zm00001d000216_P001 Maize golgi, vacuole 59.45 59.59
KRG93502 Soybean extracellular 59.91 59.37
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 59.91 59.37
PGSC0003DMT400014086 Potato extracellular 60.36 59.28
PGSC0003DMT400017863 Potato extracellular 59.45 59.05
TraesCS7D01G356700.1 Wheat extracellular 59.68 59.01
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 59.68 59.01
Os06t0583900-01 Rice plasma membrane 60.14 58.93
KRH01130 Soybean extracellular 59.0 58.86
VIT_01s0137g00240.t01 Wine grape extracellular 53.76 58.56
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 59.23 58.56
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 59.23 58.56
KRH69345 Soybean extracellular 59.0 57.94
EES06507 Sorghum golgi, vacuole 58.54 57.75
EER88571 Sorghum endoplasmic reticulum, plasma membrane 59.68 57.71
OQU75805 Sorghum mitochondrion 58.09 57.69
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 61.96 57.63
Os06t0144200-01 Rice extracellular, plasma membrane 58.77 57.33
VIT_17s0000g09810.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 52.62 57.32
CDY04133 Canola extracellular 59.91 57.3
Bra017412.1-P Field mustard extracellular 59.91 57.3
TraesCS6D01G170500.1 Wheat golgi 55.35 57.18
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 56.26 57.04
CDX85564 Canola extracellular 61.28 56.87
AT1G14420.1 Thale cress endoplasmic reticulum 59.45 56.86
CDY17432 Canola extracellular 59.45 56.86
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 54.9 56.71
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 59.0 56.55
Os02t0214400-01 Rice plasma membrane 57.4 56.5
AT2G02720.1 Thale cress extracellular, vacuole 58.54 56.48
CDY63769 Canola extracellular 61.5 56.37
Bra026221.1-P Field mustard endoplasmic reticulum 58.77 56.33
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 57.4 56.25
Bra023504.1-P Field mustard extracellular 61.5 56.13
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 58.54 56.11
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 58.54 56.11
CDY39314 Canola extracellular 58.54 55.99
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.25 55.83
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 58.09 55.8
CDY45202 Canola extracellular 58.31 55.77
Bra024811.1-P Field mustard extracellular 58.31 55.77
Bra026832.1-P Field mustard extracellular 57.4 55.75
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 59.91 55.37
CDX70590 Canola endoplasmic reticulum, extracellular 59.91 55.37
CDX78607 Canola endoplasmic reticulum, extracellular 59.91 55.37
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 59.91 55.37
CDY03043 Canola extracellular 57.86 55.34
CDX74293 Canola endoplasmic reticulum, extracellular 59.23 55.2
CDX91953 Canola endoplasmic reticulum, extracellular 59.23 55.2
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 58.54 54.8
CDX69550 Canola endoplasmic reticulum, extracellular 62.19 54.71
CDY66593 Canola endoplasmic reticulum, extracellular 62.19 54.71
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 62.19 54.71
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 58.54 54.56
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 52.85 53.95
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 48.75 53.9
Zm00001d036945_P001 Maize endoplasmic reticulum 51.48 53.81
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 55.13 53.42
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 56.04 52.9
Solyc03g058910.2.1 Tomato extracellular, golgi 47.84 52.76
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 55.58 52.7
PGSC0003DMT400014085 Potato extracellular, golgi 47.38 52.26
Os06t0144900-01 Rice mitochondrion 56.26 52.22
CDX81636 Canola endoplasmic reticulum 57.18 51.86
CDY53552 Canola extracellular 57.86 51.31
VIT_07s0005g05520.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.94 51.24
VIT_19s0015g00510.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 46.24 50.5
VIT_10s0116g01160.t01 Wine grape endoplasmic reticulum, extracellular 43.74 50.39
HORVU7Hr1G019500.1 Barley mitochondrion 58.31 49.23
VIT_13s0019g04900.t01 Wine grape extracellular 42.82 45.19
VIT_08s0007g04820.t01 Wine grape plastid 46.47 41.72
GSMUA_Achr7P08840_001 Banana nucleus 63.55 41.64
VIT_13s0019g04910.t01 Wine grape extracellular 46.24 40.93
Solyc02g067450.2.1 Tomato extracellular 53.3 37.99
CDY04136 Canola mitochondrion, nucleus 0.23 0.66
Protein Annotations
KEGG:00040+4.2.2.2EntrezGene:100254377wikigene:100254377Gene3D:2.160.20.10MapMan:21.3.5.2UniProt:A5ACS2
EMBL:AM423345InterPro:AmbAllergenProteinID:CAN79927ProteinID:CAN79927.1ProteinID:CCB47508ProteinID:CCB47508.1
EMBL:FN595239GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490
GO:GO:0046872InterPro:IPR012334EntrezGene:LOC100254377wikigene:LOC100254377PFAM:PF00544PFAM:PF04431
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001523971
ArrayExpress:VIT_14s0108g00030EnsemblPlantsGene:VIT_14s0108g00030EnsemblPlants:VIT_14s0108g00030.t01unigene:Vvi.21373RefSeq:XP_002282500RefSeq:XP_002282500.2
SEG:seg:::::
Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A5ACS2]
Coordinates
chr14:+:28869048..28870986
Molecular Weight (calculated)
49281.1 Da
IEP (calculated)
9.345
GRAVY (calculated)
-0.357
Length
439 amino acids
Sequence
(BLAST)
001: MGAYKFSSLL LLSFFAFAVL APSIRAHIGE FDEVWQKRAE EAQKAALEAY QPNPEEVTNQ FNKNVRKSMQ GTNTTRRNLR SNNGPCMATN PIDRCWRCKQ
101: DWAKNRKKLA DCVLGFGRRT TGGKDGEFYV VTDASDNDMI DPKPGTLRHA VIQKEPLWII FARDMIIRLK QELIMAGNKT IDGRGANVHI AYGCGITIQF
201: VKNIIIHNLH IHDIVPAQGG MIRDSVDHYG LRTASDGDGV SIFGSSNVWV DHLSMSNCKD GLVDVIMAST AITISNCHFT NHNEVMLFGG SNNFQGDKIM
301: QVTVAFNHYG RGLVQRMPRC RYGFVHVVNN DYTHWLMYAI GGSQNPTIIS QGNRFIAPPN MACKEVTKRD YASPDEWKSW TWISQGDLLQ NGAFFVQSGD
401: PKKKHPFTRY DMIKAKPGTF VNRLTRFSGS LGCKVNQPC
Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)
001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC
Arabidopsis Description
Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.