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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 79.68 79.68
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 69.75 70.39
VIT_17s0000g05740.t01 Wine grape extracellular 66.59 68.76
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 64.79 65.68
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 64.79 65.53
GSMUA_Achr10P... Banana extracellular 57.11 64.87
GSMUA_Achr10P... Banana cytosol 50.11 64.16
TraesCS4A01G385700.1 Wheat cytosol 30.93 62.56
KRH45851 Soybean extracellular 62.75 61.64
KRH74782 Soybean extracellular 62.3 61.61
Solyc02g087670.2.1 Tomato extracellular 61.85 61.44
PGSC0003DMT400003310 Potato extracellular 61.85 61.44
KRG93502 Soybean extracellular 61.17 61.17
KRH69345 Soybean extracellular 61.4 60.85
PGSC0003DMT400014086 Potato extracellular 60.95 60.4
Solyc03g058890.2.1 Tomato extracellular 61.17 60.36
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 59.82 59.82
OQU75805 Sorghum mitochondrion 58.92 59.05
HORVU6Hr1G038630.1 Barley extracellular 53.95 59.01
PGSC0003DMT400017863 Potato extracellular 58.69 58.82
Zm00001d000216_P001 Maize golgi, vacuole 58.01 58.68
EES06507 Sorghum golgi, vacuole 58.92 58.65
Os06t0583900-01 Rice plasma membrane 59.14 58.48
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 58.47 58.33
TraesCS7D01G356700.1 Wheat extracellular 58.47 58.33
Os06t0144200-01 Rice extracellular, plasma membrane 59.14 58.22
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 58.24 58.11
VIT_17s0000g09810.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 52.82 58.06
KRH01130 Soybean extracellular 57.56 57.95
Os02t0214400-01 Rice plasma membrane 57.79 57.4
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 55.98 57.27
EER88571 Sorghum endoplasmic reticulum, plasma membrane 58.69 57.27
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 55.53 57.21
VIT_14s0219g00230.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 51.92 57.07
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 60.72 56.99
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 57.56 56.92
AT1G14420.1 Thale cress endoplasmic reticulum 58.92 56.86
Bra017412.1-P Field mustard extracellular 58.92 56.86
CDY04133 Canola extracellular 58.92 56.86
CDY17432 Canola extracellular 58.69 56.64
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 60.72 56.63
VIT_01s0137g00240.t01 Wine grape extracellular 51.47 56.58
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 58.47 56.55
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 56.66 56.53
CDX70590 Canola endoplasmic reticulum, extracellular 60.5 56.42
CDX85564 Canola extracellular 60.05 56.24
CDY63769 Canola extracellular 60.72 56.16
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 58.01 56.11
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 58.01 56.11
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 57.79 56.02
CDX78607 Canola endoplasmic reticulum, extracellular 60.05 56.0
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 60.05 56.0
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 53.5 55.76
TraesCS6D01G170500.1 Wheat golgi 53.5 55.76
Bra026832.1-P Field mustard extracellular 56.88 55.75
CDX74293 Canola endoplasmic reticulum, extracellular 59.14 55.63
CDX91953 Canola endoplasmic reticulum, extracellular 59.14 55.63
AT2G02720.1 Thale cress extracellular, vacuole 57.11 55.6
VIT_07s0005g05520.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 55.76 55.51
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 58.69 55.44
Os06t0144900-01 Rice mitochondrion 59.14 55.39
Bra023504.1-P Field mustard extracellular 60.05 55.3
Bra024811.1-P Field mustard extracellular 57.11 55.12
CDY03043 Canola extracellular 57.11 55.12
Bra026221.1-P Field mustard endoplasmic reticulum 56.88 55.02
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 58.47 54.99
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 56.21 54.97
CDY45202 Canola extracellular 56.88 54.9
CDY39314 Canola extracellular 56.88 54.9
CDY66593 Canola endoplasmic reticulum, extracellular 61.63 54.71
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 61.4 54.51
CDX69550 Canola endoplasmic reticulum, extracellular 61.4 54.51
Solyc03g058910.2.1 Tomato extracellular, golgi 48.76 54.27
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 48.08 53.65
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 56.21 53.55
PGSC0003DMT400014085 Potato extracellular, golgi 48.08 53.52
Zm00001d036945_P001 Maize endoplasmic reticulum 50.34 53.1
CDX81636 Canola endoplasmic reticulum 56.21 51.45
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 53.5 51.19
VIT_10s0116g01160.t01 Wine grape endoplasmic reticulum, extracellular 44.02 51.18
CDY53552 Canola extracellular 56.88 50.91
VIT_19s0015g00510.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 45.6 50.25
HORVU7Hr1G019500.1 Barley mitochondrion 58.24 49.62
VIT_13s0019g04900.t01 Wine grape extracellular 45.15 48.08
VIT_13s0019g04910.t01 Wine grape extracellular 48.76 43.55
VIT_08s0007g04820.t01 Wine grape plastid 47.63 43.15
GSMUA_Achr7P08840_001 Banana nucleus 62.08 41.04
Solyc02g067450.2.1 Tomato extracellular 51.24 36.85
CDY04136 Canola mitochondrion, nucleus 0.45 1.32
Protein Annotations
KEGG:00040+4.2.2.2EntrezGene:100262177wikigene:100262177Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergen
ProteinID:CBI32015ProteinID:CBI32015.3UniProt:D7TNE2EMBL:FN596002GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872InterPro:IPR012334EntrezGene:LOC100262177
wikigene:LOC100262177PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00015CA2F8ArrayExpress:VIT_01s0026g01670EnsemblPlantsGene:VIT_01s0026g01670EnsemblPlants:VIT_01s0026g01670.t01
RefSeq:XP_002270089RefSeq:XP_002270089.1SEG:seg:::
Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:D7TNE2]
Coordinates
chr1:+:10843187..10845074
Molecular Weight (calculated)
49930.6 Da
IEP (calculated)
9.770
GRAVY (calculated)
-0.412
Length
443 amino acids
Sequence
(BLAST)
001: MAAVKSSSLL LLFFVLFAVI APTIRAHIAE YDDYWKEREE EAKKAALEAF HPTPQEVNDH FNLHVEDELT GSNGTRRSLR VNKGPCKATN PIDRCWRCRP
101: NWASQRKRLA DCVLGFGRNT VGGKYGKYYF VTDPSDNDMV NPKKGTLRHA VIQPRPLWIV FARSMIIRLN QELIMTSDKT IDGRGVNVHI AYGAGITIQF
201: VKNVIIHGLH IHDIVSGSGG LIRDSVNHFG YRSRSDGDGI SIYGSSHVWI DHNSMSNCKD GLIDAIQGST AITISNNHFT KHNEVMLFGA SDSNSADEIM
301: QITVAFNHFG RGLIQRMPRC RWGFFHVVNN DYTHWNMYAI GGSAHPTIIS QGNRYTAPHL VDPKHDAKQV TKRDYAMESE WKKWTWRSEG DLMRNGAFFV
401: PSGNPSKRMP YSRLDMIKAK PGTYVSRLTR FSGALTCRRG GPC
Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)
001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC
Arabidopsis Description
Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.