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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana extracellular 47.91 82.31
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 51.49 78.77
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 49.1 75.29
GSMUA_Achr10P... Banana cytosol 35.07 67.92
VIT_17s0000g05740.t01 Wine grape extracellular 43.13 67.37
TraesCS4A01G385700.1 Wheat cytosol 21.04 64.38
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 41.49 63.91
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 41.64 63.55
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 41.19 63.45
Solyc06g071020.2.1 Tomato extracellular 41.04 63.22
PGSC0003DMT400083135 Potato extracellular 40.6 62.53
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 41.04 62.08
Os06t0583900-01 Rice plasma membrane 40.15 60.04
KRH63402 Soybean extracellular 38.66 59.54
HORVU6Hr1G038630.1 Barley extracellular 35.97 59.51
PGSC0003DMT400003310 Potato extracellular 39.55 59.42
Solyc02g087670.2.1 Tomato extracellular 39.55 59.42
KRH54508 Soybean extracellular 29.4 59.16
KRH74782 Soybean extracellular 39.55 59.15
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 39.1 59.14
PGSC0003DMT400014086 Potato extracellular 39.4 59.06
KRH69345 Soybean extracellular 39.4 59.06
Solyc03g058890.2.1 Tomato extracellular 39.4 58.8
KRG93502 Soybean extracellular 38.81 58.69
Zm00001d000216_P001 Maize golgi, vacuole 38.36 58.68
TraesCS7D01G356700.1 Wheat extracellular 38.81 58.56
PGSC0003DMT400002241 Potato extracellular 38.36 58.54
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 38.36 58.54
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 38.66 58.47
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.36 57.88
KRH45851 Soybean extracellular 38.96 57.87
OQU75805 Sorghum mitochondrion 38.06 57.69
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.06 57.43
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 36.72 56.81
PGSC0003DMT400017863 Potato extracellular 37.46 56.79
EER88571 Sorghum endoplasmic reticulum, plasma membrane 38.36 56.61
Os02t0214400-01 Rice plasma membrane 37.61 56.5
Bra026832.1-P Field mustard extracellular 37.91 56.19
Os06t0144200-01 Rice extracellular, plasma membrane 37.61 56.0
EES06507 Sorghum golgi, vacuole 37.16 55.96
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 37.01 55.86
AT2G02720.1 Thale cress extracellular, vacuole 37.76 55.6
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 37.16 55.58
AT1G14420.1 Thale cress endoplasmic reticulum 38.06 55.56
KRH01130 Soybean extracellular 36.42 55.45
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 37.76 55.24
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 37.61 55.02
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 37.61 55.02
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 29.55 55.0
TraesCS6D01G170500.1 Wheat golgi 34.78 54.82
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 37.31 54.7
CDY39314 Canola extracellular 37.46 54.68
CDY45202 Canola extracellular 37.46 54.68
Bra024811.1-P Field mustard extracellular 37.46 54.68
Solyc05g007080.2.1 Tomato extracellular 37.16 54.61
Bra026221.1-P Field mustard endoplasmic reticulum 37.31 54.59
GSMUA_Achr6P28260_001 Banana endoplasmic reticulum, extracellular 33.13 54.55
CDY04133 Canola extracellular 37.31 54.47
CDY03043 Canola extracellular 37.31 54.47
Bra017412.1-P Field mustard extracellular 37.31 54.47
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 38.06 54.37
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 34.48 54.35
GSMUA_Achr5P15620_001 Banana cytosol 28.36 54.13
CDY17432 Canola extracellular 37.01 54.03
CDX74293 Canola endoplasmic reticulum, extracellular 37.76 53.72
CDX91953 Canola endoplasmic reticulum, extracellular 37.76 53.72
PGSC0003DMT400045436 Potato extracellular 36.57 53.38
GSMUA_Achr11P... Banana extracellular 28.96 53.3
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 31.49 53.15
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 37.31 53.08
CDX85564 Canola extracellular 37.46 53.07
CDX70590 Canola endoplasmic reticulum, extracellular 37.61 53.05
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 37.61 53.05
GSMUA_Achr8P12860_001 Banana cytosol 27.91 52.97
GSMUA_Achr4P26690_001 Banana extracellular 28.96 52.86
Os06t0144900-01 Rice mitochondrion 37.31 52.85
CDX78607 Canola endoplasmic reticulum, extracellular 37.46 52.84
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 37.46 52.84
CDY63769 Canola extracellular 37.76 52.82
CDX81636 Canola endoplasmic reticulum 38.06 52.69
Zm00001d036945_P001 Maize endoplasmic reticulum 32.99 52.62
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 37.01 52.54
Bra023504.1-P Field mustard extracellular 37.61 52.39
Solyc03g058910.2.1 Tomato extracellular, golgi 30.75 51.76
CDY53552 Canola extracellular 38.21 51.72
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 34.33 51.45
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 34.78 51.43
CDX69550 Canola endoplasmic reticulum, extracellular 38.21 51.3
CDY66593 Canola endoplasmic reticulum, extracellular 38.21 51.3
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 38.21 51.3
HORVU7Hr1G019500.1 Barley mitochondrion 39.7 51.15
PGSC0003DMT400014085 Potato extracellular, golgi 30.3 51.01
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 35.22 50.75
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 34.93 50.54
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 34.18 50.44
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 29.85 48.66
GSMUA_Achr4P25120_001 Banana extracellular 25.97 38.93
Solyc02g067450.2.1 Tomato extracellular 34.33 37.34
GSMUA_Achr1P03320_001 Banana plasma membrane 26.27 34.44
CDY04136 Canola mitochondrion, nucleus 0.15 0.66
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:1.10.10.60MapMan:15.5.3.1Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergen
ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0003824
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005975
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009058
GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0043565GO:GO:0045490GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr7G08840_001EnsemblPlants:GSMUA_Achr7P08840_001EnsemblPlants:GSMUA_Achr7T08840_001InterPro:HTH_motifInterPro:Homeobox-like_sfInterPro:Homeobox_CS
InterPro:Homeobox_domInterPro:IPR001356InterPro:IPR012334InterPro:Leu_zip_homeoUniProt:M0TFX2PFAM:PF00046
PFAM:PF00544PFAM:PF02183PFAM:PF04431PRINTS:PR00031PRINTS:PR00807ScanProsite:PS00027
PFscan:PS50071PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00389SMART:SM00656SUPFAM:SSF46689SUPFAM:SSF51126UniParc:UPI0002953A70
SEG:seg:::::
Description
Pectate lyase [Source:GMGC_GENE;Acc:GSMUA_Achr7G08840_001]
Coordinates
chr7:+:7201876..7206205
Molecular Weight (calculated)
75301.9 Da
IEP (calculated)
7.633
GRAVY (calculated)
-0.492
Length
670 amino acids
Sequence
(BLAST)
001: MITVHSASGS QFMVNSDGSH GNSLKFGLEE TADDDLDEYP QRPGKKRRLT ADQVEFLEKN FEVENKLEPE RKLQLAKDLG LKPRQVAIWF QNRRARWKAK
101: QLEKGYESLK SSYDSLKLDH DNLLKENEKL QAEVVLLTNK LLQEEKDSSS WESFQLRICP DKLQPGIDAQ VMLCKQEDFS SANSAVLESE SPQHVDDGGY
201: SNQSQVVGCC GFLRPESHSC SNEFQKKKTT IGFTMEYKPR FFFFSLLFLA SAAFTSAHIA DYDEYWQKKA ALARSHANNA YNPNPESVTH HFNEAVMRDL
301: ASNSTRRGLR GKMRNEDGAC QATNPIDRCF RCQSNWVHHR KKLATCAKGF GRHATGGKNG DFYVVTDSSD ADLVNPRNGT LRHAVIQDRP LWIVFAHDML
401: IRLTEELIIN SNKTIDGRGA NVQIAYGAGL TIQFVHNVIV HNIRIHDIKA GNGGMIRDSE EHYGLRTRSD GDGISIFGAS NIWIDHVSMS NCMDGLIDAI
501: EGSTAITISN SHFTQHNDVM LFGASDAFSG DAIMQITVAF NHFGKGLVQR MPRCRWGFVH VVNNDYTHWM MYAVGGSQHP TILSQGNRFI APPTLFAKEV
601: TKREYSPEPV WKQWSWRSEG DLMANGAFFV ESGAPITKPY ADLIKAKPGS FVTRLTRFAG SRPCIPNQPC
Best Arabidopsis Sequence Match ( AT2G02720.1 )
(BLAST)
001: MVNLGSYVFV FVALSLTVVV PSVQAHIAEY DEYWTQRQTN ALRETLESYD PNPENVTDHF NYHAALAMET TGIVNETRRD LRQVGRGKKT TRRGGRFESL
101: NAIDKCWRGD KNWDKNRKKL ADCVLGFGRK TTGGKNGPIY VVTDPSDNDL LKPKPGTIRH AVTRDRPLWI IFARSMIIKL QQELIITNDK TIDGRGAKIY
201: ITGGAGLTLQ FVRNVIIHNI HIKQIKRGAG GLIIDSEQHF GLRTVSDGDG INIFGATNVW IDHVSMTDCS DGMIDAIMGS TAITISNSHF TDHDEVMLFG
301: GTNKDVIDKK MQITVAFNHF GKRLKQRMPR VRFGLVHVVN NDYTHWEMYA IGGNMNPTII SQGNRFIAPP IEDSKQVTKR EYTPYPEWKS WNWQSEKDYF
401: LNGAYFVQSG KANAWSATPK NPIPRKFAIR PQPGTKVRRL TKDAGTLGCK PGKSC
Arabidopsis Description
Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.