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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular, mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P26690_001 Banana extracellular 90.31 86.38
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 86.61 84.44
GSMUA_Achr11P... Banana extracellular 84.33 81.32
GSMUA_Achr8P12860_001 Banana cytosol 80.63 80.17
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 81.48 69.59
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 80.63 65.81
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 81.2 63.76
AT1G04680.1 Thale cress extracellular 76.64 62.41
KRG90246 Soybean nucleus 79.2 62.05
KRH33474 Soybean nucleus 79.2 61.78
Bra040809.1-P Field mustard endoplasmic reticulum, golgi, vacuole 74.07 61.47
PGSC0003DMT400076251 Potato extracellular 78.35 61.38
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 75.21 61.25
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 75.21 61.25
Bra030583.1-P Field mustard endoplasmic reticulum, extracellular, golgi 75.21 61.25
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 79.2 61.23
CDX89799 Canola extracellular 74.93 61.02
Bra032494.1-P Field mustard extracellular 74.93 61.02
CDY61137 Canola extracellular 74.93 61.02
Bra015341.1-P Field mustard extracellular 74.64 60.79
Solyc09g091430.2.1 Tomato nucleus 77.78 60.53
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 77.21 59.96
Bra032730.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 76.92 59.87
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 77.49 59.78
GSMUA_Achr6P28260_001 Banana endoplasmic reticulum, extracellular 68.95 59.46
AT4G13710.1 Thale cress endoplasmic reticulum, extracellular, vacuole 76.92 57.45
CDY18738 Canola endoplasmic reticulum, extracellular 76.07 56.09
Bra015000.1-P Field mustard golgi, plasma membrane 68.38 53.69
AT3G24230.1 Thale cress endoplasmic reticulum, golgi, vacuole 68.95 53.54
CDY66697 Canola endoplasmic reticulum, golgi 68.09 53.47
CDX77470 Canola golgi, plasma membrane 68.95 52.72
GSMUA_Achr10P... Banana cytosol 51.57 52.31
GSMUA_Achr4P25120_001 Banana extracellular 59.83 46.98
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 55.84 44.75
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 54.7 43.94
GSMUA_Achr1P03320_001 Banana plasma membrane 61.25 42.07
GSMUA_Achr10P... Banana extracellular 46.72 42.05
GSMUA_Achr7P08840_001 Banana nucleus 54.13 28.36
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergenGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSMUA_Achr5G15620_001EnsemblPlants:GSMUA_Achr5P15620_001
EnsemblPlants:GSMUA_Achr5T15620_001InterPro:IPR012334UniProt:M0SYU1PFAM:PF00544PRINTS:PR00807PANTHER:PTHR31683
PANTHER:PTHR31683:SF34InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
UniParc:UPI000296DB81SEG:seg::::
Description
Probable pectate lyase 15 [Source:GMGC_GENE;Acc:GSMUA_Achr5G15620_001]
Coordinates
chr5:+:11638620..11641380
Molecular Weight (calculated)
38127.9 Da
IEP (calculated)
7.616
GRAVY (calculated)
-0.212
Length
351 amino acids
Sequence
(BLAST)
001: MKHHISLLSP AGDVVVGAVD DPEFIATEVE IRQIGNITAR RSLGYLSTCV TGNPIDDCWR CDPEWHLHRK RLADCGIGFG RSAMGGRNGR FKTIDGRGAN
101: VHIANGACIT IQFVTNIIIH GLHIHDCKPT GNAMVRSSPS HYGWRTIADG DAISIFGSSH IWVDHNSLSN CADGLVDAIM GSTAITISNN YFTHHNEVML
201: LGHSDSYVRD KAMQVTIAFN HFGEGLIQRM PRCRHGYFHV VNNDYTHWEM YAIGGSANPT INSQSNRYLA PTNPFAKEVT KRVETSSDVW ESWNWRSEGD
301: LLLNGAYFTP SGAGASASYS RASSLGAKSS SMVGSITAGA GALPCRKGSL C
Best Arabidopsis Sequence Match ( AT1G04680.1 )
(BLAST)
001: MAVLPTWLLA MMCLLFFVGA MENTTHDNIS SLPRSDETEW NQHAVTNPDE VADEVLALTE MSVRNHTERR KLGYFTCGTG NPIDDCWRCD PNWHKNRKRL
101: ADCGIGFGRN AIGGRDGRFY VVTDPRDDNP VNPRPGTLRH AVIQDRPLWI VFKRDMVIQL KQELIVNSFK TIDGRGANVH IANGGCITIQ FVTNVIVHGL
201: HIHDCKPTGN AMVRSSETHF GWRTMADGDA ISIFGSSHVW IDHNSLSHCA DGLVDAVMGS TAITISNNHL THHNEVMLLG HSDSYMRDKA MQVTIAYNHF
301: GVGLIQRMPR CRHGYFHVVN NDYTHWEMYA IGGSANPTIN SQGNRYAAPK NPFAKEVTKR VDTPASHWKG WNWRSEGDLL QNGAYFTSSG AAASGSYARA
401: SSLSAKSSSL VGHITSDAGA LPCRRGRQCS S
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A178W464]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.