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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77470 Canola golgi, plasma membrane 98.21 95.64
AT3G24230.1 Thale cress endoplasmic reticulum, golgi, vacuole 76.29 75.44
HORVU2Hr1G002930.1 Barley cytosol 45.86 74.82
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 74.72 73.89
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 75.17 73.85
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 69.35 72.09
GSMUA_Achr8P12860_001 Banana cytosol 55.7 70.54
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 56.6 70.28
CDY18738 Canola endoplasmic reticulum, extracellular 73.83 69.33
KRG90246 Soybean nucleus 69.35 69.2
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 64.21 68.99
CDY33938 Canola extracellular 64.21 68.82
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 63.98 68.75
CDY05655 Canola extracellular 63.98 68.59
KRH33474 Soybean nucleus 68.68 68.22
GSMUA_Achr5P15620_001 Banana cytosol 53.47 68.09
CDY19932 Canola extracellular 63.53 67.94
CDY56668 Canola extracellular 63.53 67.94
GSMUA_Achr4P26690_001 Banana extracellular 55.48 67.57
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 65.1 67.52
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 65.1 67.52
CDY61137 Canola extracellular 64.43 66.82
GSMUA_Achr11P... Banana extracellular 54.36 66.76
CDY18330 Canola cytosol 21.7 66.44
CDX89799 Canola extracellular 63.98 66.36
Solyc09g091430.2.1 Tomato nucleus 66.67 66.08
PGSC0003DMT400076251 Potato extracellular 66.0 65.85
CDY46471 Canola endoplasmic reticulum, extracellular 63.76 64.92
CDY01119 Canola endoplasmic reticulum, extracellular 63.09 64.83
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 64.65 64.65
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 58.61 64.53
CDY47327 Canola endoplasmic reticulum, extracellular 62.19 64.2
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 58.17 64.04
CDY12666 Canola extracellular 57.72 63.55
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 58.39 63.5
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 64.43 63.44
Zm00001d025067_P001 Maize mitochondrion 64.43 63.44
Zm00001d004448_P001 Maize endoplasmic reticulum 63.53 63.39
CDY56520 Canola extracellular 57.72 63.39
CDY70583 Canola cytosol 34.45 63.37
CDY11033 Canola endoplasmic reticulum, extracellular 57.49 63.3
CDY32557 Canola extracellular 57.49 63.3
CDY28857 Canola extracellular 57.49 63.15
CDX92652 Canola endoplasmic reticulum, extracellular 57.27 63.05
CDY03419 Canola endoplasmic reticulum, extracellular 57.27 63.05
CDY08948 Canola endoplasmic reticulum, extracellular 57.27 63.05
CDY34310 Canola endoplasmic reticulum, vacuole 57.27 63.05
CDY24847 Canola endoplasmic reticulum, extracellular 57.05 62.81
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 57.27 61.99
TraesCS2D01G018000.1 Wheat golgi 65.1 61.52
TraesCS2B01G024500.2 Wheat golgi 65.1 60.5
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 55.7 60.44
CDY00156 Canola extracellular, plastid 55.48 60.19
TraesCS2A01G016500.1 Wheat golgi 64.65 60.08
CDY20049 Canola plastid, vacuole 55.26 59.95
KXG25802 Sorghum plastid 64.88 59.92
CDY16732 Canola endoplasmic reticulum, golgi 56.82 59.35
CDY48132 Canola endoplasmic reticulum, golgi 56.6 59.11
CDY03964 Canola extracellular 54.36 58.98
CDY34149 Canola extracellular 46.53 57.94
CDX77400 Canola endoplasmic reticulum, extracellular 63.76 57.93
CDY65626 Canola golgi 57.05 56.17
HORVU2Hr1G002880.2 Barley mitochondrion 63.98 56.08
CDX98092 Canola extracellular 43.18 54.21
CDY30040 Canola extracellular 43.18 54.21
CDX98091 Canola extracellular 44.74 53.91
CDY30041 Canola extracellular 44.52 53.64
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 38.26 52.29
CDY06557 Canola extracellular 44.74 51.68
CDY20748 Canola extracellular 44.74 51.55
CDX70244 Canola vacuole 50.34 51.02
CDX78152 Canola extracellular 53.02 49.79
CDX73573 Canola extracellular 52.8 49.58
CDX67560 Canola plasma membrane 54.14 49.39
CDY27438 Canola extracellular 44.52 48.77
CDX76388 Canola extracellular 44.3 48.53
CDX79122 Canola extracellular 43.18 48.13
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 51.68 47.05
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 51.23 46.54
CDY17432 Canola extracellular 46.98 45.75
CDX85564 Canola extracellular 48.32 45.67
CDX70590 Canola endoplasmic reticulum, extracellular 48.32 45.47
CDX78607 Canola endoplasmic reticulum, extracellular 48.32 45.47
CDY63769 Canola extracellular 48.55 45.3
CDY04133 Canola extracellular 46.31 45.1
CDY11284 Canola extracellular, golgi 51.45 45.1
CDY45202 Canola extracellular 46.09 44.88
CDY03043 Canola extracellular 45.86 44.66
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 46.76 44.56
CDY58428 Canola endoplasmic reticulum, golgi, plastid 51.23 44.47
CDX74293 Canola endoplasmic reticulum, extracellular 46.76 44.37
CDX91953 Canola endoplasmic reticulum, extracellular 46.76 44.37
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 45.19 44.1
CDY66593 Canola endoplasmic reticulum, extracellular 48.99 43.89
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 44.97 43.89
CDY13312 Canola plasma membrane 52.57 43.84
CDX69550 Canola endoplasmic reticulum, extracellular 48.77 43.69
CDY41382 Canola endoplasmic reticulum, golgi 51.45 43.64
CDY09356 Canola extracellular 44.52 43.54
CDY39314 Canola extracellular 44.52 43.36
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 47.65 43.29
CDY41679 Canola endoplasmic reticulum, plasma membrane 44.07 43.11
CDY45254 Canola endoplasmic reticulum 44.07 43.01
CDX81636 Canola endoplasmic reticulum 45.19 41.74
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 48.1 41.59
CDY53552 Canola extracellular 45.64 41.21
CDY70492 Canola endoplasmic reticulum, extracellular 4.7 38.18
CDX81635 Canola mitochondrion, nucleus 0.45 1.32
CDX96858 Canola mitochondrion, nucleus 0.45 1.32
CDY04136 Canola mitochondrion, nucleus 0.45 1.32
CDY09355 Canola mitochondrion, nucleus 0.45 1.32
CDY41678 Canola mitochondrion, nucleus 0.45 1.32
CDY45199 Canola mitochondrion, nucleus 0.45 1.32
CDY45253 Canola mitochondrion, nucleus 0.45 1.32
CDY53553 Canola mitochondrion, nucleus 0.45 1.32
CDY66531 Canola mitochondrion, nucleus 0.45 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078JMV2UniProt:A0A078JMV2InterPro:AmbAllergen
EnsemblPlants:CDY66697ProteinID:CDY66697ProteinID:CDY66697.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00055594001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF63InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-TMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEA6EF
Description
BnaAnng22760DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078JMV2]
Coordinates
chrLK035415:+:7633..10449
Molecular Weight (calculated)
49625.0 Da
IEP (calculated)
8.535
GRAVY (calculated)
-0.350
Length
447 amino acids
Sequence
(BLAST)
001: MASSFQKLTS ACFVVLLIFV VCALTATNLR NNQVSLSRKL KTEDSQSFNN STIAIRREGV ELNEHAVADP DQVALLQTNE QNITERRKLG FFSCGNGNVI
101: DDCWRCDPNW HMNRKRLADC GMGFGSNATG GRDGRFYVVT DPTDEDMEFP KSGTLRHAVI QVEPLWIIFK RDMVITLKQE LIMNSYKTID ARGANVHVAN
201: GACITIQGIT HVIVHGLHIH DCIRTGNAMV RSSPSHYGMR SMSDGDAVSI YASSHIWIDH NSLSKCADGL VDVVMGSTAV TISNNHLTHH NEVMLLGNND
301: LYTQDKNMKV TIAYNHFGEG LRQRMPRCRH GYFHVVNNDY THWEMYAIGG SANPTIKSQG NRYAAPKNRY AKQVTKRVRT EKSEWKKWNW RSEGDMLVNG
401: AFFIQSGEGA TANYESASSL AAKPASMVGS ITSTAGALGC RSGKPCY
Best Arabidopsis Sequence Match ( AT3G24230.1 )
(BLAST)
001: MATSSLKLTS ACFVLLFIFV GCVLTATNLR NNEISRSRKL KTEDSKSFNS SPMTTRLDGV VELNEHAVTD PDKVAHEVSN LIHMSEQNIT ARRKLGFFSC
101: GNGNLIDDCW RCDRNWNKNR KHLADCGMGF GSKAFGGRNG SYYVVTDHSD DDVVNPKPGT LRHAVIQVEP LWIIFKRDMV IKLKQELIMN SFKTIDARGA
201: NVHIANGACI TIQNITNVIV HGLHIHDCKR TGNVTVRSSP SQAGFRGTAD GDAINIFGSS HIWIDHNSLS NCTDGLVDVV NGSTAITISN NHFTHHDEVM
301: LLGHNDSYTR DKMMQVTVAY NHFGEGLIQR MPRCRHGYFH VVNNDYTHWK MYAIGGSANP TINSQGNRFA APKNHSAKEV TKRLDTKGNE WMEWNWRSEK
401: DLLVNGAFFT PSGEGASGDS QTLSLPAKPA SMVDAITASA GALSCRRGKP CY
Arabidopsis Description
Probable pectate lyase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRM5]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.