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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 6
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98092 Canola extracellular 96.91 96.91
CDX98091 Canola extracellular 75.0 71.97
CDY30041 Canola extracellular 74.72 71.7
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 53.93 58.72
CDX79122 Canola extracellular 64.04 56.86
PGSC0003DMT400042396 Potato endoplasmic reticulum, extracellular, vacuole 61.24 54.91
CDX76388 Canola extracellular 62.64 54.66
CDY27438 Canola extracellular 61.52 53.68
CDY18330 Canola cytosol 20.51 50.0
CDY08948 Canola endoplasmic reticulum, extracellular 56.74 49.75
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 56.46 49.51
CDY24847 Canola endoplasmic reticulum, extracellular 56.18 49.26
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 55.9 49.01
CDY34310 Canola endoplasmic reticulum, vacuole 55.62 48.77
CDY70583 Canola cytosol 33.15 48.56
CDY03419 Canola endoplasmic reticulum, extracellular 55.34 48.52
CDY28857 Canola extracellular 55.34 48.4
CDY11033 Canola endoplasmic reticulum, extracellular 55.06 48.28
CDY56520 Canola extracellular 55.06 48.16
CDY12666 Canola extracellular 54.78 48.03
CDY32557 Canola extracellular 54.49 47.78
CDX92652 Canola endoplasmic reticulum, extracellular 54.49 47.78
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 55.06 47.57
CDY03964 Canola extracellular 55.06 47.57
CDY00156 Canola extracellular, plastid 55.06 47.57
CDY20049 Canola plastid, vacuole 54.78 47.33
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 54.21 46.73
CDY05655 Canola extracellular 54.49 46.52
CDY33938 Canola extracellular 54.49 46.52
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 54.21 46.39
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 54.21 46.39
CDY19932 Canola extracellular 53.65 45.69
CDY56668 Canola extracellular 53.65 45.69
CDY20748 Canola extracellular 49.72 45.62
CDY06557 Canola extracellular 49.44 45.48
CDY34149 Canola extracellular 45.79 45.4
CDY48132 Canola endoplasmic reticulum, golgi 53.37 44.39
CDY16732 Canola endoplasmic reticulum, golgi 53.09 44.16
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 53.09 43.85
CDY61137 Canola extracellular 52.81 43.62
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 52.81 43.62
CDX89799 Canola extracellular 52.81 43.62
CDY47327 Canola endoplasmic reticulum, extracellular 52.81 43.42
CDY46471 Canola endoplasmic reticulum, extracellular 53.37 43.28
CDY66697 Canola endoplasmic reticulum, golgi 54.21 43.18
CDY65626 Canola golgi 54.49 42.73
CDY01119 Canola endoplasmic reticulum, extracellular 51.97 42.53
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 54.21 42.42
CDX77470 Canola golgi, plasma membrane 54.21 42.05
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 53.37 42.04
CDX70244 Canola vacuole 50.84 41.04
CDY18738 Canola endoplasmic reticulum, extracellular 53.93 40.34
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 53.09 38.49
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 53.09 38.41
CDX77400 Canola endoplasmic reticulum, extracellular 53.09 38.41
CDY45254 Canola endoplasmic reticulum 48.6 37.77
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 48.31 37.55
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 48.31 37.55
CDX70590 Canola endoplasmic reticulum, extracellular 50.0 37.47
CDY39314 Canola extracellular 48.31 37.47
CDX78152 Canola extracellular 50.0 37.4
CDX78607 Canola endoplasmic reticulum, extracellular 49.72 37.26
CDX85564 Canola extracellular 49.44 37.21
CDX73573 Canola extracellular 49.72 37.18
CDY17432 Canola extracellular 47.75 37.04
CDY63769 Canola extracellular 49.44 36.74
CDX74293 Canola endoplasmic reticulum, extracellular 48.6 36.73
CDX91953 Canola endoplasmic reticulum, extracellular 48.6 36.73
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 48.31 36.67
CDY04133 Canola extracellular 47.19 36.6
CDY45202 Canola extracellular 47.19 36.6
CDX67560 Canola plasma membrane 50.28 36.53
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 50.28 36.38
CDY09356 Canola extracellular 46.63 36.32
CDY03043 Canola extracellular 46.63 36.17
CDY41679 Canola endoplasmic reticulum, plasma membrane 46.35 36.1
CDY11284 Canola extracellular, golgi 51.4 35.88
CDX69550 Canola endoplasmic reticulum, extracellular 50.28 35.87
CDY66593 Canola endoplasmic reticulum, extracellular 50.0 35.67
CDY53552 Canola extracellular 49.44 35.56
CDX81636 Canola endoplasmic reticulum 48.31 35.54
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 50.84 35.01
CDY58428 Canola endoplasmic reticulum, golgi, plastid 50.28 34.76
CDY41382 Canola endoplasmic reticulum, golgi 50.84 34.35
CDY13312 Canola plasma membrane 50.56 33.58
CDY70492 Canola endoplasmic reticulum, extracellular 1.97 12.73
CDY04136 Canola mitochondrion, nucleus 0.56 1.32
CDY09355 Canola mitochondrion, nucleus 0.56 1.32
CDY66531 Canola mitochondrion, nucleus 0.56 1.32
CDX96858 Canola mitochondrion, nucleus 0.56 1.32
CDY53553 Canola mitochondrion, nucleus 0.56 1.32
CDX81635 Canola mitochondrion, nucleus 0.56 1.32
CDY45253 Canola mitochondrion, nucleus 0.56 1.32
CDY45199 Canola mitochondrion, nucleus 0.56 1.32
CDY41678 Canola mitochondrion, nucleus 0.56 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078GU99UniProt:A0A078GU99InterPro:AmbAllergen
EnsemblPlants:CDY30040ProteinID:CDY30040ProteinID:CDY30040.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00044577001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF18InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EE47FDSEG:seg
Description
BnaC05g09800DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078GU99]
Coordinates
chrLK032248:-:41662..43068
Molecular Weight (calculated)
39064.0 Da
IEP (calculated)
6.078
GRAVY (calculated)
-0.194
Length
356 amino acids
Sequence
(BLAST)
001: MASFFLIVSL LFALFFSPLV ESQNPIDSCW RTNPNWESNR PALAGCAVGF GKYAAGGKDG SIYVVTSSED DPESPSPGTL RHAVIQTEPL WITFEHDMGI
101: VLKNELIMNS NKTIDGRGAK VEIANGPCIT IQHVSHVIIH GISIHHCKPG KSGSDGDAIS VFNSSNVWID HCYFSQSEDG LIDVVLGSTA VTISNSYFTQ
201: HDKVMLLGHN DNIVVDENMK VTIAFNHFGP GLIERIPRVR RGFAHVANNR YNKWLKYALG GSADPTIFSE GNYFLAPDDP SKKQVTKRLE SGNDRSWKWI
301: SSKDVFLNGA YFEPSSNGKV TQVYEGEEEF SVYDGSLVPN LTSSAGPLSC YSGRIC
Best Arabidopsis Sequence Match ( AT1G11920.1 )
(BLAST)
001: MASLFLTIIS LLFAAFSSSV VEAAYSNGYT IPKLLPNPID SCWRRNPYWA SNRRALADCA VGFGKSAVGG KYGSIYVVTN PSDDPENPRP GTLRYAVIQS
101: KPLWITFARD MVIVLRNELI MNSYKTIDGR GAKVEIAYGP CITIQHVSHV IIHGISIHDC KPGKSGRVRS SPTHVGSRKG SDGDAIAIFD SSHIWIDHCF
201: FSRCQDGLID VLHASTAVTI SNNYFTQHDK VMLLGHNDNN VEDKIMRVTI AFNHFGPGLI ERMPRVRRGY AHVANNRYEK WQMYAIGGSA DPTIFSEGNY
301: FVASDDPSKK QVTKRIDSGY DWKRWKWRTS KDVFKNGAYF VPSGYGTVTP LYGRAERFPV SHGSLVPLLT SSAGPLHCYS GRIC
Arabidopsis Description
Putative pectate lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65388]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.