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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09356 Canola extracellular 98.69 98.69
CDY45202 Canola extracellular 81.4 81.05
CDY03043 Canola extracellular 81.18 80.83
CDY04133 Canola extracellular 80.74 80.39
CDY17432 Canola extracellular 80.53 80.17
CDY39314 Canola extracellular 73.96 73.64
CDY45254 Canola endoplasmic reticulum 73.52 73.36
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 71.55 71.4
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 71.55 71.4
CDY53552 Canola extracellular 72.21 66.67
CDX81636 Canola endoplasmic reticulum 70.46 66.53
CDY18330 Canola cytosol 17.07 53.42
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 53.61 52.24
CDX70590 Canola endoplasmic reticulum, extracellular 54.05 52.0
CDY70583 Canola cytosol 27.57 51.85
CDY28857 Canola extracellular 46.17 51.84
CDY03419 Canola endoplasmic reticulum, extracellular 45.95 51.72
CDX74293 Canola endoplasmic reticulum, extracellular 53.17 51.59
CDX91953 Canola endoplasmic reticulum, extracellular 53.17 51.59
CDY34310 Canola endoplasmic reticulum, vacuole 45.73 51.48
CDY56520 Canola extracellular 45.73 51.35
CDY12666 Canola extracellular 45.51 51.23
CDY32557 Canola extracellular 45.51 51.23
CDY08948 Canola endoplasmic reticulum, extracellular 45.3 50.99
CDY20049 Canola plastid, vacuole 45.95 50.97
CDX85564 Canola extracellular 52.74 50.95
CDX78607 Canola endoplasmic reticulum, extracellular 52.95 50.95
CDY63769 Canola extracellular 53.39 50.94
KRH11474 Soybean extracellular 41.58 50.94
CDY24847 Canola endoplasmic reticulum, extracellular 45.08 50.74
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.08 50.74
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.73 50.73
CDX92652 Canola endoplasmic reticulum, extracellular 44.86 50.49
CDY00156 Canola extracellular, plastid 45.51 50.49
CDY11033 Canola endoplasmic reticulum, extracellular 44.64 50.25
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.42 50.0
CDY03964 Canola extracellular 44.86 49.76
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.86 49.64
CDY66593 Canola endoplasmic reticulum, extracellular 53.61 49.1
CDX69550 Canola endoplasmic reticulum, extracellular 53.39 48.9
PGSC0003DMT400042395 Potato extracellular 40.48 48.56
CDY34149 Canola extracellular 38.07 48.47
CDY48132 Canola endoplasmic reticulum, golgi 45.3 48.36
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 43.98 48.32
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 43.98 48.32
CDY05655 Canola extracellular 43.98 48.2
CDY33938 Canola extracellular 43.98 48.2
CDY16732 Canola endoplasmic reticulum, golgi 45.08 48.13
CDY19932 Canola extracellular 43.76 47.85
CDX89799 Canola extracellular 45.08 47.8
CDY56668 Canola extracellular 43.54 47.61
CDY46471 Canola endoplasmic reticulum, extracellular 45.51 47.38
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 44.64 47.33
CDY61137 Canola extracellular 44.64 47.33
CDX98091 Canola extracellular 38.29 47.17
CDY01119 Canola endoplasmic reticulum, extracellular 44.86 47.13
CDY47327 Canola endoplasmic reticulum, extracellular 44.64 47.11
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 44.2 46.87
KRH02031 Soybean extracellular 40.7 46.73
CDY30041 Canola extracellular 37.86 46.63
KRH36488 Soybean extracellular 40.48 46.6
CDX98092 Canola extracellular 36.1 46.35
CDY30040 Canola extracellular 36.1 46.35
VIT_10s0116g01160.t01 Wine grape endoplasmic reticulum, extracellular 38.51 46.19
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 32.82 45.87
CDY06557 Canola extracellular 38.51 45.48
CDY65626 Canola golgi 45.08 45.37
KRH36487 Soybean extracellular 28.23 45.26
CDY20748 Canola extracellular 38.29 45.1
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 44.2 44.69
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 44.42 44.62
CDY27438 Canola extracellular 39.82 44.61
CDX79122 Canola extracellular 38.95 44.39
CDX76388 Canola extracellular 39.61 44.36
CDY66697 Canola endoplasmic reticulum, golgi 43.11 44.07
CDY18738 Canola endoplasmic reticulum, extracellular 45.08 43.28
CDX77470 Canola golgi, plasma membrane 42.67 42.48
CDX77400 Canola endoplasmic reticulum, extracellular 45.51 42.28
CDX73573 Canola extracellular 42.89 41.18
CDX78152 Canola extracellular 42.89 41.18
CDX70244 Canola vacuole 39.61 41.04
CDX67560 Canola plasma membrane 43.33 40.41
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 42.89 39.84
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 42.45 39.51
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 42.45 39.43
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 42.67 37.72
CDY13312 Canola plasma membrane 43.11 36.75
CDY11284 Canola extracellular, golgi 40.26 36.08
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.26 35.73
CDY41382 Canola endoplasmic reticulum, golgi 40.48 35.1
Solyc02g080910.2.1 Tomato extracellular 41.14 24.77
CDY70492 Canola endoplasmic reticulum, extracellular 1.09 9.09
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078HW99UniProt:A0A078HW99InterPro:AmbAllergen
EnsemblPlants:CDY41679ProteinID:CDY41679ProteinID:CDY41679.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00073359001InterPro:IPR012334PFAM:PF00544
PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF14InterPro:Pec_lyaseInterPro:Pec_lyase_N
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EE3F8D::::
Description
BnaC02g34750DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078HW99]
Coordinates
chrLK032503:-:79383..81718
Molecular Weight (calculated)
51412.6 Da
IEP (calculated)
9.936
GRAVY (calculated)
-0.402
Length
457 amino acids
Sequence
(BLAST)
001: MAFAYLNLGS YVIVFVSLSI AIVAPSVQAH IAVFDDYWTQ RQANALRQTM ESYEPNPLNV TNHFNYHAAL AMETTGADNG PRRELGQVKA GQKTRGGRFR
101: SLNAIDRCWR GDKNWAKNRK KLADCVLGFG LKTIGGKNGP IYVVTDASDD DLLSPKPGTL RHAVTRDRPL WIIFARTMVI KLQQELMITN DKTIDGRGVS
201: VYITGGAGFT LQFVKNVIIH NIHMKFIKRG FGGLIRDSEE HFGLRTISDG DGINIFGATN IWIDHVSMRN CSDGMIDAIM GSTAITISNS HFTDHKEVML
301: FGAKNGDEFD KKMQITVAFN HFGKRLNQRM PRVRYGMVHV VNNDYTHWEM YAIGGNMNPT IISQGNRFIA PPKEDCKQVT KREYTPYPEW KSWNWQSERD
401: YFLNGAYFVQ SGKSNAWSAA PKNPIPKEFT IRPQPGTKVR SLTKDAGTLD CRPGKSC
Best Arabidopsis Sequence Match ( AT2G02720.1 )
(BLAST)
001: MVNLGSYVFV FVALSLTVVV PSVQAHIAEY DEYWTQRQTN ALRETLESYD PNPENVTDHF NYHAALAMET TGIVNETRRD LRQVGRGKKT TRRGGRFESL
101: NAIDKCWRGD KNWDKNRKKL ADCVLGFGRK TTGGKNGPIY VVTDPSDNDL LKPKPGTIRH AVTRDRPLWI IFARSMIIKL QQELIITNDK TIDGRGAKIY
201: ITGGAGLTLQ FVRNVIIHNI HIKQIKRGAG GLIIDSEQHF GLRTVSDGDG INIFGATNVW IDHVSMTDCS DGMIDAIMGS TAITISNSHF TDHDEVMLFG
301: GTNKDVIDKK MQITVAFNHF GKRLKQRMPR VRFGLVHVVN NDYTHWEMYA IGGNMNPTII SQGNRFIAPP IEDSKQVTKR EYTPYPEWKS WNWQSEKDYF
401: LNGAYFVQSG KANAWSATPK NPIPRKFAIR PQPGTKVRRL TKDAGTLGCK PGKSC
Arabidopsis Description
Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.