CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
nucleus 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11474	Soybean	extracellular	71.54	76.14
KRH02031	Soybean	extracellular	72.29	72.11
KRH36487	Soybean	extracellular	50.63	70.53
PGSC0003DMT400042395	Potato	extracellular	66.75	69.55
VIT_10s0116g01160.t01	Wine grape	endoplasmic reticulum, extracellular	61.46	64.04
KRH57176	Soybean	nucleus	56.42	55.17
KRH03893	Soybean	nucleus	56.42	55.17
KRH31375	Soybean	nucleus	55.42	54.73
KRG97506	Soybean	endoplasmic reticulum, golgi	55.16	54.07
KRG93976	Soybean	extracellular	54.91	53.96
KRH58231	Soybean	extracellular	54.66	53.71
KRH63675	Soybean	endoplasmic reticulum, extracellular, vacuole	55.16	53.68
KRH54276	Soybean	endoplasmic reticulum, golgi, vacuole	54.91	53.43
KRG97507	Soybean	endoplasmic reticulum, extracellular	52.39	53.06
KRH31373	Soybean	extracellular	47.36	50.67
KRH54508	Soybean	extracellular	40.81	48.65
KRG90246	Soybean	nucleus	53.9	47.77
KRH33474	Soybean	nucleus	53.9	47.56
KRG99852	Soybean	nucleus	51.89	45.68
KRH63402	Soybean	extracellular	49.87	45.52
KRH46795	Soybean	nucleus	51.64	45.45
KRG93502	Soybean	extracellular	48.61	43.57
KRH74782	Soybean	extracellular	49.12	43.53
KRH45851	Soybean	extracellular	49.12	43.24
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	47.36	42.44
KRH19954	Soybean	endoplasmic reticulum, extracellular, plasma membrane	50.88	42.35
KRH69345	Soybean	extracellular	47.61	42.28
KRH01130	Soybean	extracellular	46.1	41.59
KRH67761	Soybean	endoplasmic reticulum, extracellular, vacuole	48.87	41.28
CDY41679	Canola	endoplasmic reticulum, plasma membrane	46.6	40.48
CDY09356	Canola	extracellular	46.35	40.26
CDY45254	Canola	endoplasmic reticulum	46.1	39.96
KRH35994	Soybean	extracellular	49.12	38.69
KRG90767	Soybean	extracellular	48.87	38.65
Solyc02g080910.2.1	Tomato	extracellular	67.0	35.05
CDY70492	Canola	endoplasmic reticulum, extracellular	0.5	3.64
CDX96858	Canola	mitochondrion, nucleus	0.25	0.66
CDX81635	Canola	mitochondrion, nucleus	0.25	0.66
CDY09355	Canola	mitochondrion, nucleus	0.25	0.66
CDY41678	Canola	mitochondrion, nucleus	0.25	0.66
CDY66531	Canola	mitochondrion, nucleus	0.25	0.66
CDY53553	Canola	mitochondrion, nucleus	0.25	0.66
CDY45253	Canola	mitochondrion, nucleus	0.25	0.66
CDY45199	Canola	mitochondrion, nucleus	0.25	0.66

Protein Annotations

KEGG:00040+4.2.2.2	EntrezGene:100803229	Gene3D:2.160.20.10	MapMan:21.3.5.2	EMBL:ACUP02005377	InterPro:AmbAllergen
EnsemblPlantsGene:GLYMA_09G006000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	UniProt:I1KZU9	InterPro:IPR012334	EnsemblPlants:KRH36488	ProteinID:KRH36488	ProteinID:KRH36488.1
PFAM:PF00544	PRINTS:PR00807	PANTHER:PTHR31683	PANTHER:PTHR31683:SF18	InterPro:Pec_lyase	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00023CB146	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:463598..465470

Molecular Weight (calculated)

43588.7 Da

IEP (calculated)

6.237

GRAVY (calculated)

-0.088

Length

397 amino acids

Sequence
(BLAST)

001: MATLTTLLVT LYFIVPALAS TPNRDSTKEF NALSPISSYI NKTPEDVVIM NTIDSCWRAK TNWASNRKAL ADCAIGFGKE AIGGKFGDIY EVTDPSDDPV
101: DPKPGTLRYG AIQTEPLWIT FAKDMVIRLK NELMVNSYKT IDGRGAKVEI ANGACITIQG VCHVIVHGIS IHDCEPGKGG MVRSSPEHVG YREGSDGDAI
201: SIFASSNVWI DHCFLARCTD GLIDVIHAST AVTISNNYFT QHDKVMLLGH SDEYTADKVM RVTVAFNRFA SGLIERMPRV RFGYAHVVNN LYDEWLMYAI
301: GGSADPTIFS EGNYFTASND SAAKQVTKRE SSEKWNNWKW RSFRDEFING AYFVPSGYGS CTPIYSAAQS FIAAQASMVP LLTLNAGPLN CVVDKAC

Best Arabidopsis Sequence Match ( AT4G22080.1 )
(BLAST)

001: MTLFTVSCLL VVLFLCHSLV HAENNGYYGY TPTVANYLPE KPQNIMNPVD SCWRLKSDWA ANRKDLADCV VGFGSSTLGG KKGNLYVVTN PYDNAQNPQP
101: GSLRYGVIQA KPLWITFAKD MVITLENELM VNSYKTIDGR GAKVEIAYGP CITIQDVTNV IVHGISIHDC KPGKYGMVRS SPTHVGHRKG SDGDAIAIFG
201: SSNIWIDHCY LASCTDGLID VIHASTGITI SNNYFTQHDK VMLLGHNDDF VQDVKMKVTV AFNHFGPGLV ERMPRVRRGY AHVANNRYDK WIMYAIGGSA
301: DPTIFSEGNY FIASDKSNSK EVTKREVKGG WNNWRWRTSK DVFKNGAYFV PSGYGSISLP YSSAQRFTVA PGNLVPSLTA DAGPLNCNRN GPCY

Arabidopsis Description

RHS14Probable pectate lyase 16 [Source:UniProtKB/Swiss-Prot;Acc:O65456]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.